FFCP PHASE1:Mm9::chr2:104342689..104342700,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=147|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:104342689..104342700,-|id=chr2:104342689..104342700,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!5.65e-17!14;UBERON:0000117!5.65e-17!14;UBERON:0000171!5.65e-17!14;UBERON:0000170!5.65e-17!14;UBERON:0005597!5.65e-17!14;UBERON:0000118!5.65e-17!14;UBERON:0005153!1.77e-13!17;UBERON:0005178!1.77e-13!17;UBERON:0005181!1.77e-13!17;UBERON:0002224!1.77e-13!17;UBERON:0000915!1.77e-13!17;UBERON:0008947!1.77e-13!17;UBERON:0003258!1.77e-13!17;UBERON:0005157!1.74e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.45e-32,14;UBERON:0000117,2.45e-32,14;UBERON:0000171,2.45e-32,14;UBERON:0000170,2.45e-32,14;UBERON:0005597,2.45e-32,14;UBERON:0000118,2.45e-32,14;UBERON:0005153,1.04e-26,17;UBERON:0005178,1.04e-26,17;UBERON:0005181,1.04e-26,17;UBERON:0002224,1.04e-26,17;UBERON:0000915,1.04e-26,17;UBERON:0008947,1.04e-26,17;UBERON:0003258,1.04e-26,17;UBERON:0005157,9.21e-23,20;UBERON:0000065,3.01e-11,41;UBERON:0001004,5.51e-11,42;UBERON:0000310,2.37e-09,6;UBERON:0001443,2.37e-09,6;UBERON:0009569,4.87e-07,66;UBERON:0005911,9.79e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,6.28160846566456,0,0,0,0.234690248288502,1.17254380209271,2.14239276797412,0.390267295715598,0.945810864637146,0.8858587585951,0.797273843287435,1.96635977658886,1.20879487306127,1.73578870297814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.34461281373368,0,0.463537303779422,0,0,0,0.342869252385415,0.532427418478012,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0,0.271608227691724,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.771626443924566,0.749431733813838,0.701794825336225,0.214871054048298,0,0.220591419119515,0|short_description=p@chr2:104342689..104342700,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=147 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:104342689..104342700,- | |||
|id=chr2:104342689..104342700,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.65e-17!14;UBERON:0000117!5.65e-17!14;UBERON:0000171!5.65e-17!14;UBERON:0000170!5.65e-17!14;UBERON:0005597!5.65e-17!14;UBERON:0000118!5.65e-17!14;UBERON:0005153!1.77e-13!17;UBERON:0005178!1.77e-13!17;UBERON:0005181!1.77e-13!17;UBERON:0002224!1.77e-13!17;UBERON:0000915!1.77e-13!17;UBERON:0008947!1.77e-13!17;UBERON:0003258!1.77e-13!17;UBERON:0005157!1.74e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.45e-32,14;UBERON:0000117,2.45e-32,14;UBERON:0000171,2.45e-32,14;UBERON:0000170,2.45e-32,14;UBERON:0005597,2.45e-32,14;UBERON:0000118,2.45e-32,14;UBERON:0005153,1.04e-26,17;UBERON:0005178,1.04e-26,17;UBERON:0005181,1.04e-26,17;UBERON:0002224,1.04e-26,17;UBERON:0000915,1.04e-26,17;UBERON:0008947,1.04e-26,17;UBERON:0003258,1.04e-26,17;UBERON:0005157,9.21e-23,20;UBERON:0000065,3.01e-11,41;UBERON:0001004,5.51e-11,42;UBERON:0000310,2.37e-09,6;UBERON:0001443,2.37e-09,6;UBERON:0009569,4.87e-07,66;UBERON:0005911,9.79e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,6.28160846566456,0,0,0,0.234690248288502,1.17254380209271,2.14239276797412,0.390267295715598,0.945810864637146,0.8858587585951,0.797273843287435,1.96635977658886,1.20879487306127,1.73578870297814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.256100609619477,0.34461281373368,0,0.463537303779422,0,0,0,0.342869252385415,0.532427418478012,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0,0.271608227691724,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.771626443924566,0.749431733813838,0.701794825336225,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr2:104342689..104342700,- | |||
}} |
Revision as of 21:31, 13 September 2013
Short description: | p@chr2:104342689..104342700, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:104342689..104342700, - |
Coexpression cluster: | MCL_coexpression_mm9:147 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.45e-32 | 14 |
respiratory tube | 2.45e-32 | 14 |
respiration organ | 2.45e-32 | 14 |
pair of lungs | 2.45e-32 | 14 |
lung primordium | 2.45e-32 | 14 |
lung bud | 2.45e-32 | 14 |
epithelial bud | 1.04e-26 | 17 |
thoracic cavity element | 1.04e-26 | 17 |
thoracic segment organ | 1.04e-26 | 17 |
thoracic cavity | 1.04e-26 | 17 |
thoracic segment of trunk | 1.04e-26 | 17 |
respiratory primordium | 1.04e-26 | 17 |
endoderm of foregut | 1.04e-26 | 17 |
epithelial fold | 9.21e-23 | 20 |
respiratory tract | 3.01e-11 | 41 |
respiratory system | 5.51e-11 | 42 |
breast | 2.37e-09 | 6 |
chest | 2.37e-09 | 6 |
subdivision of trunk | 4.87e-07 | 66 |
endo-epithelium | 9.79e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.