FFCP PHASE1:Mm9::chr2:155577076..155577106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=19124|HGNC=|MCL_coexpression_id=56|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143493_5end|description=CAGE_peak_4_at_Procr_5end|id=chr2:155577076..155577106,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.29e-09,6;CL:0000187,3.29e-09,6;CL:0000056,3.29e-09,6;CL:0000192,1.42e-08,3;CL:0000359,1.42e-08,3;CL:0002539,1.42e-08,3;CL:0000514,1.42e-08,3;CL:0000222,5.82e-08,7;CL:0000349,6.97e-08,3;CL:0000351,6.97e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005795,1.24e-13,4;UBERON:0000995,1.24e-13,4;UBERON:0001987,7.08e-13,2;UBERON:0003124,7.08e-13,2;UBERON:0004340,7.08e-13,2;UBERON:0003975,5.13e-11,5;UBERON:0005631,7.12e-09,3;UBERON:0000478,7.12e-09,3;UBERON:0000158,7.12e-09,3;UBERON:0001135,1.42e-08,3;UBERON:0004237,1.42e-08,3;UBERON:0004695,1.42e-08,3;UBERON:0002111,1.42e-08,3;UBERON:0004178,1.42e-08,3;UBERON:0000358,6.97e-08,3;UBERON:0000307,6.97e-08,3;UBERON:0007010,6.97e-08,3;UBERON:0003134,4.60e-07,8;UBERON:0000029,6.09e-07,1;UBERON:0001097,6.09e-07,1;UBERON:0003968,6.09e-07,1;UBERON:0001467,6.09e-07,1;UBERON:0006834,8.98e-07,1|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.92616169317078,0.550640256485045,0.782391344348039,0,0.439372365468944,0,0.979904951377538,0,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,1.55362730188303,0.148442139064825,0,0.304465478312141,0.461230994512117,0.904335843315735,0.705532242814229,0.502666365318702,0,0.578397427679647,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0,0.30140963567143,0.340182495756639,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0.469052119962192,0.36012412292203,0,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0.493679549740441,0,0.0810688095458557,0,0.878200461164203,0,0,0,0,0,0.426576501070468,0,0.644337306610467,0,0.444756087689741,0.570676878337677,0.949058123089023,0.329397909448022,1.25667604400135,0.397912944082302,0.19496408711912,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,0,0.37898282354097,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,1.10344600874334,0.221464689648775,0,0,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0.178368817602071,0.164549020602121,0,17.1310346886509,4.2366414172764,0.220528398054962,0.16488625294148,0,0,0.238744688006273,0.492422699235184,0,0,0.170870880797853,0.412773735926445,0,0,0,0,1.5298058699447,0.979660166265606,0.690999869022119,2.86401185404534,0.632671987162271,0,0.216010681643603,0.209088296014469,0,0.404593039154462,0.495920734352016,1.30877970992015,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,1.10992976687032,0.448569283047378,1.00730769818447,0.19318959403219,1.31377732815827,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.287177344778066,0,0.115884325944855,0,0.412085900803307,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0,0,0,0.711810108745045,0.29551344712669,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p4@Procr}} | ||
|EntrezGene=19124 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000143493_5end | |||
|description=CAGE_peak_4_at_Procr_5end | |||
|id=chr2:155577076..155577106,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.29e-09,6;CL:0000187,3.29e-09,6;CL:0000056,3.29e-09,6;CL:0000192,1.42e-08,3;CL:0000359,1.42e-08,3;CL:0002539,1.42e-08,3;CL:0000514,1.42e-08,3;CL:0000222,5.82e-08,7;CL:0000349,6.97e-08,3;CL:0000351,6.97e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,1.24e-13,4;UBERON:0000995,1.24e-13,4;UBERON:0001987,7.08e-13,2;UBERON:0003124,7.08e-13,2;UBERON:0004340,7.08e-13,2;UBERON:0003975,5.13e-11,5;UBERON:0005631,7.12e-09,3;UBERON:0000478,7.12e-09,3;UBERON:0000158,7.12e-09,3;UBERON:0001135,1.42e-08,3;UBERON:0004237,1.42e-08,3;UBERON:0004695,1.42e-08,3;UBERON:0002111,1.42e-08,3;UBERON:0004178,1.42e-08,3;UBERON:0000358,6.97e-08,3;UBERON:0000307,6.97e-08,3;UBERON:0007010,6.97e-08,3;UBERON:0003134,4.60e-07,8;UBERON:0000029,6.09e-07,1;UBERON:0001097,6.09e-07,1;UBERON:0003968,6.09e-07,1;UBERON:0001467,6.09e-07,1;UBERON:0006834,8.98e-07,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.92616169317078,0.550640256485045,0.782391344348039,0,0.439372365468944,0,0.979904951377538,0,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,1.55362730188303,0.148442139064825,0,0.304465478312141,0.461230994512117,0.904335843315735,0.705532242814229,0.502666365318702,0,0.578397427679647,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0,0.30140963567143,0.340182495756639,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0.469052119962192,0.36012412292203,0,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0.493679549740441,0,0.0810688095458557,0,0.878200461164203,0,0,0,0,0,0.426576501070468,0,0.644337306610467,0,0.444756087689741,0.570676878337677,0.949058123089023,0.329397909448022,1.25667604400135,0.397912944082302,0.19496408711912,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0.505157755894224,0,0.482443521363367,0,0.37898282354097,0,0,0.234690248288502,0.167506257441816,0,0.390267295715598,1.10344600874334,0.221464689648775,0,0,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0.178368817602071,0.164549020602121,0,17.1310346886509,4.2366414172764,0.220528398054962,0.16488625294148,0,0,0.238744688006273,0.492422699235184,0,0,0.170870880797853,0.412773735926445,0,0,0,0,1.5298058699447,0.979660166265606,0.690999869022119,2.86401185404534,0.632671987162271,0,0.216010681643603,0.209088296014469,0,0.404593039154462,0.495920734352016,1.30877970992015,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.352071715937262,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,1.10992976687032,0.448569283047378,1.00730769818447,0.19318959403219,1.31377732815827,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0.44449345560323,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.287177344778066,0,0.115884325944855,0,0.412085900803307,0.441596760403192,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0,0,0,0.711810108745045,0.29551344712669,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p4@Procr | |||
}} |
Revision as of 22:34, 13 September 2013
Short description: | p4@Procr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Procr_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000143493_5end |
EntrezGene: | Procr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.29e-09 | 6 |
muscle cell | 3.29e-09 | 6 |
myoblast | 3.29e-09 | 6 |
smooth muscle cell | 1.42e-08 | 3 |
vascular associated smooth muscle cell | 1.42e-08 | 3 |
aortic smooth muscle cell | 1.42e-08 | 3 |
smooth muscle myoblast | 1.42e-08 | 3 |
mesodermal cell | 5.82e-08 | 7 |
extraembryonic cell | 6.97e-08 | 3 |
trophoblast cell | 6.97e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 1.24e-13 | 4 |
uterus | 1.24e-13 | 4 |
placenta | 7.08e-13 | 2 |
chorion | 7.08e-13 | 2 |
allantois | 7.08e-13 | 2 |
internal female genitalia | 5.13e-11 | 5 |
extraembryonic membrane | 7.12e-09 | 3 |
extraembryonic structure | 7.12e-09 | 3 |
membranous layer | 7.12e-09 | 3 |
smooth muscle tissue | 1.42e-08 | 3 |
blood vessel smooth muscle | 1.42e-08 | 3 |
arterial system smooth muscle | 1.42e-08 | 3 |
artery smooth muscle tissue | 1.42e-08 | 3 |
aorta smooth muscle tissue | 1.42e-08 | 3 |
blastocyst | 6.97e-08 | 3 |
blastula | 6.97e-08 | 3 |
cleaving embryo | 6.97e-08 | 3 |
female reproductive organ | 4.60e-07 | 8 |
lymph node | 6.09e-07 | 1 |
axillary lymph node | 6.09e-07 | 1 |
peripheral lymph node | 6.09e-07 | 1 |
shoulder | 6.09e-07 | 1 |
uterus or analog | 8.98e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.