FFCP PHASE1:Mm9::chr2:163575905..163575919,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11486|HGNC=|MCL_coexpression_id=74|UniProt=P03958,Q4FK28|association_with_transcript=0bp_to_NM_007398,uc008ntl.1_5end|description=CAGE_peak_1_at_Ada_5end|id=chr2:163575905..163575919,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.51e-11!130;UBERON:0000925!6.51e-11!130;UBERON:0006595!6.51e-11!130;UBERON:0004923!4.56e-10!24;UBERON:0001007!5.13e-10!128;UBERON:0001555!5.13e-10!128;UBERON:0007026!5.13e-10!128;UBERON:0004921!3.40e-09!126;UBERON:0004185!3.40e-09!126;UBERON:0000344!4.77e-09!15;UBERON:0005409!2.44e-08!59;UBERON:0001242!6.57e-08!13;UBERON:0000060!6.57e-08!13;UBERON:0001262!6.57e-08!13;UBERON:0004786!6.57e-08!13;UBERON:0002193!1.61e-07!48;UBERON:0000160!2.00e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.89e-12,118;UBERON:0000925,2.89e-12,118;UBERON:0006595,2.89e-12,118;UBERON:0001007,2.75e-11,116;UBERON:0001555,2.75e-11,116;UBERON:0007026,2.75e-11,116;UBERON:0005409,1.25e-10,47;UBERON:0000160,1.52e-10,31;UBERON:0004921,2.18e-10,114;UBERON:0004923,2.39e-10,24;UBERON:0000344,2.70e-09,15;UBERON:0001242,4.05e-08,13;UBERON:0001262,4.05e-08,13;UBERON:0004786,4.05e-08,13;UBERON:0002193,1.50e-07,48;UBERON:0002405,1.50e-07,48|phase1_expression=0.320297694209588,1528.16331005276,1739.00709294681,146.090214061199,129.231098326158,50.8674193893026,47.8905913220828,3.61545305636414,10.2775767170717,15.6823232635736,0.34243593645101,0.957265907944037,1.02720437958723,2.97229368224591,2.6648780945253,3.64455481301687,2.09868563438444,2.20823515750766,0.959801035240171,3.39511721438424,4.84746753861098,1.09220046320974,1.82839852397255,132.313733650147,98.4165815778159,1939.75557478054,731.864631474268,1215.4732235811,242.08983638742,130.551607215644,684.925547414236,0,0,0,3.75507105676657,12.4675984018869,7.14592746918292,51.4793905806397,33.5974198145234,42.9289470058515,24.1174910092716,40.2996836125483,33.5002143591496,0.755380907853464,0.709638518536602,0,3.12956537739216,9.59310688073965,4.17403747195497,2.13872888981712,6.85933465964276,5.75010257459886,2.85230430298152,5.80289713609076,6.72187598284928,9.00408026125814,13.1805382371828,13.9231464914909,0.606949382578793,0,0,1.35537812827653,0.889294796111139,14.3983954765024,8.89979726310277,7.104801149461,3.59520132622086,0.384218305321555,0.311068836925433,0,0.630974884054146,0.285650984403804,1.32521124570968,0.857435594504678,1.15014565221884,0.919218786610021,0,0,0,0.131886287730194,0.182975287204819,1.56274011167028,0.837548997004143,0.56276261003168,0.763991238884051,1.17851434189467,0.711858403995515,0.559198337475902,1.66597625333005,2.04043212288321,55.9438463194238,6.0229671388697,0,0.539703191637817,0.649776417447669,0,80.1937638952303,1.02258193546835,1.03914401841148,1.7666978725517,0.281686839553361,3.84979432242953,2.54805239706646,0,0,0.253359865475099,0.505524445014783,93.0598619710339,8.02707439306232,1.7813056687779,2.25530924795977,1.52232739156071,1.61430848079241,3.01445281105245,1.05829836422134,3.14166478324189,39.0568049020311,1.59059292611903,3.5384422077995,1.94120219936891,1.32504911076236,3.87900202508178,33.550517019262,0,0.209446706813455,1099.23170856257,3.83408398418945,4.19931911695385,2.54140454146129,0.149790639404823,0.915001205637253,0.376963056338593,0.521472960576829,0,0,0.973447578406546,0.509196819251581,3.23458123586242,0,0,2.73252930221678,1.14951052216736,0.360124259610698,0.452114453507145,1.08858398642125,1.5373646434182,0.843315521037559,0.517406741478031,1.5089759505299,1.51284864134255,1.23165786914764,1.09597866213787,1.11218899690239,1.39300866608867,2.26360350048738,0.796137067273973,2.1066395619397,2.31613116403244,1.70498099637356,1.03562886267751,0.469052119962192,1.08037236876609,0.23674473558521,1.18058539048442,0.617068451549513,0,0,1.05088808130453,1.15191894939436,0.985004784474571,0.810688095458557,0.584799949701329,0,1.07365135008297,0.210289948564127,1.02904612379284,10884.6555490523,1502.3436692156,0.853153002140936,1.39342003116263,2.57734922644187,0.403367049246685,0.889512175379481,0.951128130562796,1335.32477918626,40.8453407715547,76.1545682664817,59.0900721962218,55.9546930031875,1038.13641699563,985.157231328856,792.781408825636,2.46568271239006,1.94222471436539,5.63538678365402,2.44381593414377,2.52138233317913,2.38461787627083,2.15004226222475,1.32849133181642,1.56998727841375,1.35736880313981,2.07516838961004,1.16791574001266,1.37591296579242,1.79889689907883,1.21716072833102,1.92941727801933,2.29163266603278,0.863088412352432,2.59416362840057,3.84385978463314,0,1.86070473834252,1.5601883655728,2.02063102357689,1.61457672169721,0.964887042726734,0.923765950833023,2.08440552947533,2.44447464663039,2.20668611507745,1.64283173801951,2.68010011906905,1.19021820443007,1.56106918286239,2.04925687338048,2.21464689648775,0.797273843287435,16.2224681568581,1.03610989119537,3.03763023021174,30.1582567878545,10.8781136763742,14.752928190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| ||
|EntrezGene=11486 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=P03958,Q4FK28 | |||
|association_with_transcript=0bp_to_NM_007398,uc008ntl.1_5end | |||
|description=CAGE_peak_1_at_Ada_5end | |||
|id=chr2:163575905..163575919,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.51e-11!130;UBERON:0000925!6.51e-11!130;UBERON:0006595!6.51e-11!130;UBERON:0004923!4.56e-10!24;UBERON:0001007!5.13e-10!128;UBERON:0001555!5.13e-10!128;UBERON:0007026!5.13e-10!128;UBERON:0004921!3.40e-09!126;UBERON:0004185!3.40e-09!126;UBERON:0000344!4.77e-09!15;UBERON:0005409!2.44e-08!59;UBERON:0001242!6.57e-08!13;UBERON:0000060!6.57e-08!13;UBERON:0001262!6.57e-08!13;UBERON:0004786!6.57e-08!13;UBERON:0002193!1.61e-07!48;UBERON:0000160!2.00e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.89e-12,118;UBERON:0000925,2.89e-12,118;UBERON:0006595,2.89e-12,118;UBERON:0001007,2.75e-11,116;UBERON:0001555,2.75e-11,116;UBERON:0007026,2.75e-11,116;UBERON:0005409,1.25e-10,47;UBERON:0000160,1.52e-10,31;UBERON:0004921,2.18e-10,114;UBERON:0004923,2.39e-10,24;UBERON:0000344,2.70e-09,15;UBERON:0001242,4.05e-08,13;UBERON:0001262,4.05e-08,13;UBERON:0004786,4.05e-08,13;UBERON:0002193,1.50e-07,48;UBERON:0002405,1.50e-07,48 | |||
|phase1_expression=0.320297694209588,1528.16331005276,1739.00709294681,146.090214061199,129.231098326158,50.8674193893026,47.8905913220828,3.61545305636414,10.2775767170717,15.6823232635736,0.34243593645101,0.957265907944037,1.02720437958723,2.97229368224591,2.6648780945253,3.64455481301687,2.09868563438444,2.20823515750766,0.959801035240171,3.39511721438424,4.84746753861098,1.09220046320974,1.82839852397255,132.313733650147,98.4165815778159,1939.75557478054,731.864631474268,1215.4732235811,242.08983638742,130.551607215644,684.925547414236,0,0,0,3.75507105676657,12.4675984018869,7.14592746918292,51.4793905806397,33.5974198145234,42.9289470058515,24.1174910092716,40.2996836125483,33.5002143591496,0.755380907853464,0.709638518536602,0,3.12956537739216,9.59310688073965,4.17403747195497,2.13872888981712,6.85933465964276,5.75010257459886,2.85230430298152,5.80289713609076,6.72187598284928,9.00408026125814,13.1805382371828,13.9231464914909,0.606949382578793,0,0,1.35537812827653,0.889294796111139,14.3983954765024,8.89979726310277,7.104801149461,3.59520132622086,0.384218305321555,0.311068836925433,0,0.630974884054146,0.285650984403804,1.32521124570968,0.857435594504678,1.15014565221884,0.919218786610021,0,0,0,0.131886287730194,0.182975287204819,1.56274011167028,0.837548997004143,0.56276261003168,0.763991238884051,1.17851434189467,0.711858403995515,0.559198337475902,1.66597625333005,2.04043212288321,55.9438463194238,6.0229671388697,0,0.539703191637817,0.649776417447669,0,80.1937638952303,1.02258193546835,1.03914401841148,1.7666978725517,0.281686839553361,3.84979432242953,2.54805239706646,0,0,0.253359865475099,0.505524445014783,93.0598619710339,8.02707439306232,1.7813056687779,2.25530924795977,1.52232739156071,1.61430848079241,3.01445281105245,1.05829836422134,3.14166478324189,39.0568049020311,1.59059292611903,3.5384422077995,1.94120219936891,1.32504911076236,3.87900202508178,33.550517019262,0,0.209446706813455,1099.23170856257,3.83408398418945,4.19931911695385,2.54140454146129,0.149790639404823,0.915001205637253,0.376963056338593,0.521472960576829,0,0,0.973447578406546,0.509196819251581,3.23458123586242,0,0,2.73252930221678,1.14951052216736,0.360124259610698,0.452114453507145,1.08858398642125,1.5373646434182,0.843315521037559,0.517406741478031,1.5089759505299,1.51284864134255,1.23165786914764,1.09597866213787,1.11218899690239,1.39300866608867,2.26360350048738,0.796137067273973,2.1066395619397,2.31613116403244,1.70498099637356,1.03562886267751,0.469052119962192,1.08037236876609,0.23674473558521,1.18058539048442,0.617068451549513,0,0,1.05088808130453,1.15191894939436,0.985004784474571,0.810688095458557,0.584799949701329,0,1.07365135008297,0.210289948564127,1.02904612379284,10884.6555490523,1502.3436692156,0.853153002140936,1.39342003116263,2.57734922644187,0.403367049246685,0.889512175379481,0.951128130562796,1335.32477918626,40.8453407715547,76.1545682664817,59.0900721962218,55.9546930031875,1038.13641699563,985.157231328856,792.781408825636,2.46568271239006,1.94222471436539,5.63538678365402,2.44381593414377,2.52138233317913,2.38461787627083,2.15004226222475,1.32849133181642,1.56998727841375,1.35736880313981,2.07516838961004,1.16791574001266,1.37591296579242,1.79889689907883,1.21716072833102,1.92941727801933,2.29163266603278,0.863088412352432,2.59416362840057,3.84385978463314,0,1.86070473834252,1.5601883655728,2.02063102357689,1.61457672169721,0.964887042726734,0.923765950833023,2.08440552947533,2.44447464663039,2.20668611507745,1.64283173801951,2.68010011906905,1.19021820443007,1.56106918286239,2.04925687338048,2.21464689648775,0.797273843287435,16.2224681568581,1.03610989119537,3.03763023021174,30.1582567878545,10.8781136763742,14.7529281905711,9.10591262805617,0.481651769963376,1.05490517932983,1.80328439914343,0.757412781613119,0.94652465824877,1.95219372148319,0.646270193198397,0.716906393857656,0.668396022247182,0.566153061577665,1.61924280669958,1.75353514746787,1.58115111178609,0,5.81954349353901,3.02711526234334,1.62886959353576,4.94910368917606,2.65490276679926,1.94224508923985,2.41858845571801,1.32023555829129,1.77181135728464,1.53717573971964,6.46070732920553,0.727067458955011,0.356497378384721,0.948110273807448,1.05418608574999,0,0.680879211507576,1.26042765821917,1.55230420539305,1.92903331528433,0.886701168211368,2.31879462882692,1.81003922662333,2.13125464380219,929.534635640357,321.772915642143,0.220528398054962,0.65954501176592,0.322928853391811,0.784068024066026,0.596861720015682,0.820704498725306,736.863555000263,1.29797711407357,8.88528580148834,3.50857675537478,2.03713980106683,2.0720530270516,1.50363650493128,2.28778173206523,5.26933132980952,5.73800954526998,5.94259887359022,67.7816138790731,1.42351197111511,2.23651413839534,1.18805874903981,0.836353184057875,2.40198820120795,11.3286050963249,12.4806718145257,68.8418127417998,1.42576470620972,3.10669656543463,2.81846469342095,4.9340460194513,4.46737924234164,4.27792614356905,4.26227417476513,3.04121025883401,0.821500670520278,2.21347454234715,0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| |||
|short_description=p1@Ada | |||
}} |
Revision as of 22:47, 13 September 2013
Short description: | p1@Ada |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ada_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_NM_007398, uc008ntl.1_5end |
EntrezGene: | Ada |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.89e-12 | 118 |
endoderm | 2.89e-12 | 118 |
presumptive endoderm | 2.89e-12 | 118 |
digestive system | 2.75e-11 | 116 |
digestive tract | 2.75e-11 | 116 |
primitive gut | 2.75e-11 | 116 |
gastrointestinal system | 1.25e-10 | 47 |
intestine | 1.52e-10 | 31 |
subdivision of digestive tract | 2.18e-10 | 114 |
organ component layer | 2.39e-10 | 24 |
mucosa | 2.70e-09 | 15 |
intestinal mucosa | 4.05e-08 | 13 |
wall of intestine | 4.05e-08 | 13 |
gastrointestinal system mucosa | 4.05e-08 | 13 |
hemolymphoid system | 1.50e-07 | 48 |
immune system | 1.50e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.