FFCP PHASE1:Mm9::chr2:22629893..22629944,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54519|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000148315_5end|description=CAGE_peak_1_at_Apbb1ip_5end|id=chr2:22629893..22629944,+|ontology_enrichment_celltype=CL:0000988!9.52e-15!32;CL:0002032!9.52e-15!32;CL:0000037!9.52e-15!32;CL:0000566!9.52e-15!32;CL:0000837!9.52e-15!32;CL:0002031!9.58e-14!25;CL:0002320!9.45e-10!46;CL:0000134!9.45e-10!46;CL:0000738!3.88e-09!17;CL:0002087!3.88e-09!17;CL:0000049!7.65e-09!19;CL:0000838!2.88e-08!12;CL:0000763!5.76e-08!16;CL:0000084!8.99e-08!11;CL:0000827!8.99e-08!11;CL:0000542!4.35e-07!13;CL:0000051!4.35e-07!13;CL:0000791!5.02e-07!9;CL:0000789!5.02e-07!9;CL:0002420!5.02e-07!9;CL:0002419!5.02e-07!9;CL:0000790!5.02e-07!9;CL:0000839!7.41e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,9.36e-15,32;CL:0002032,9.36e-15,32;CL:0000037,9.36e-15,32;CL:0000837,9.36e-15,32;CL:0002031,9.43e-14,25;CL:0002320,8.80e-10,46;CL:0000134,8.80e-10,46;CL:0000738,3.84e-09,17;CL:0002087,3.84e-09,17;CL:0000049,7.58e-09,19;CL:0000838,2.86e-08,12;CL:0000763,5.72e-08,16;CL:0000084,8.92e-08,11;CL:0000827,8.92e-08,11;CL:0000542,4.32e-07,13;CL:0000051,4.32e-07,13;CL:0000791,4.99e-07,9;CL:0000789,4.99e-07,9;CL:0002420,4.99e-07,9;CL:0002419,4.99e-07,9;CL:0000790,4.99e-07,9;CL:0000839,7.36e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.32e-23!48;UBERON:0002390!9.22e-23!45;UBERON:0003061!9.22e-23!45;UBERON:0002405!6.35e-20!70;UBERON:0003081!4.57e-16!88;UBERON:0004177!4.85e-14!29;UBERON:0002204!1.56e-12!32;UBERON:0006562!4.82e-11!24;UBERON:0001557!4.82e-11!24;UBERON:0001042!4.82e-11!24;UBERON:0008814!4.82e-11!24;UBERON:0009145!4.82e-11!24;UBERON:0005057!4.82e-11!51;UBERON:0002370!5.60e-11!23;UBERON:0000974!5.60e-11!23;UBERON:0004807!5.60e-11!23;UBERON:0005058!5.60e-11!23;UBERON:0003351!5.60e-11!23;UBERON:0009113!5.60e-11!23;UBERON:0003295!5.60e-11!23;UBERON:0009722!5.60e-11!23;UBERON:0005562!5.60e-11!23;UBERON:0007690!5.60e-11!23;UBERON:0003408!7.61e-11!24;UBERON:0002384!9.45e-10!46;UBERON:0002371!2.39e-09!16;UBERON:0001474!7.38e-09!22;UBERON:0004765!7.38e-09!22;UBERON:0001434!7.38e-09!22;UBERON:0000072!1.45e-07!27;UBERON:0002368!5.34e-07!60;UBERON:0002530!6.88e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.26e-23,48;UBERON:0002405,2.26e-23,48;UBERON:0002390,8.97e-23,45;UBERON:0003061,8.97e-23,45;UBERON:0003081,1.88e-15,87;UBERON:0004177,4.78e-14,29;UBERON:0005057,4.78e-14,29;UBERON:0000077,8.06e-13,35;UBERON:0002204,1.53e-12,32;UBERON:0006562,4.76e-11,24;UBERON:0001557,4.76e-11,24;UBERON:0001042,4.76e-11,24;UBERON:0008814,4.76e-11,24;UBERON:0009145,4.76e-11,24;UBERON:0002370,5.53e-11,23;UBERON:0000974,5.53e-11,23;UBERON:0004807,5.53e-11,23;UBERON:0005058,5.53e-11,23;UBERON:0003351,5.53e-11,23;UBERON:0009113,5.53e-11,23;UBERON:0003295,5.53e-11,23;UBERON:0009722,5.53e-11,23;UBERON:0005562,5.53e-11,23;UBERON:0007690,5.53e-11,23;UBERON:0003408,7.52e-11,24;UBERON:0000926,2.12e-10,120;UBERON:0004120,2.12e-10,120;UBERON:0006603,2.12e-10,120;UBERON:0002384,8.80e-10,46;UBERON:0002371,2.36e-09,16;UBERON:0001474,7.31e-09,22;UBERON:0004765,7.31e-09,22;UBERON:0001434,7.31e-09,22;UBERON:0000072,1.10e-07,27;UBERON:0002368,5.08e-07,60;UBERON:0002530,6.55e-07,65|phase1_expression=1.12104192973356,0.348975407639361,0,0,0,0,0.233612640595526,118.406087595925,111.363879221968,164.079232951717,79.6163552248598,91.3391220496602,174.967145989692,148.964365721972,64.6232937922386,63.5772339604053,65.0592546659176,94.4809185247922,98.0368200281032,71.2974615020691,8.41928572495591,42.9929818699833,40.7471671056739,10.0795226359846,7.11168771308227,0,0,0,1.52018735565099,3.52842181663903,1.10865255327652,14.6057054895715,13.5314253268605,15.8481681015439,0.288851619751275,0.166234645358492,0.408338712524738,237.307434627827,147.672380114998,194.750832758253,307.64506824022,311.468741141051,223.820272747362,41.0423626600382,33.6571411648788,29.0003868415457,7.04152209913235,0.65407546914134,0.659058548203415,1.36100929351998,2.2397827460058,1.43752564364972,66.4419119988636,155.227498390428,149.225646819254,28.2985379639542,30.3725446335082,21.6582278756526,1.21389876515759,1.5869729378161,0.633831403506179,3.04960078862219,2.66788438833342,93.1396207386248,101.853235344398,65.3641705750412,70.4060259718251,31.1216827310459,1.34796496001021,0.945041568321835,1.47227472945967,3.99911378165325,2.87129103237098,1.95985278743926,0.670918297127655,0.919218786610021,2.20231761998777,7.15049093277051,6.14426133024974,1.31886287730194,1.09785172322892,0.52091337055676,1.3959149950069,1.12552522006336,4.88954392885792,2.94628585473668,5.26775218956681,1.67759501242771,1.51452386666368,1.058001841495,2.02905142091174,0.860423876981386,0,0,1.29955283489534,1.34408066129201,14.7466641138339,20.9629296771011,12.9893002301434,8.48014978824817,3.23939865486365,26.9485602570067,35.6727335589304,7.11066703153331,0,0,0,7.76450382089608,353.968086945684,14.6957717674177,3.64319186208885,4.26251669636998,2.536770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| ||
|EntrezGene=54519 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000148315_5end | |||
|description=CAGE_peak_1_at_Apbb1ip_5end | |||
|id=chr2:22629893..22629944,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.52e-15!32;CL:0002032!9.52e-15!32;CL:0000037!9.52e-15!32;CL:0000566!9.52e-15!32;CL:0000837!9.52e-15!32;CL:0002031!9.58e-14!25;CL:0002320!9.45e-10!46;CL:0000134!9.45e-10!46;CL:0000738!3.88e-09!17;CL:0002087!3.88e-09!17;CL:0000049!7.65e-09!19;CL:0000838!2.88e-08!12;CL:0000763!5.76e-08!16;CL:0000084!8.99e-08!11;CL:0000827!8.99e-08!11;CL:0000542!4.35e-07!13;CL:0000051!4.35e-07!13;CL:0000791!5.02e-07!9;CL:0000789!5.02e-07!9;CL:0002420!5.02e-07!9;CL:0002419!5.02e-07!9;CL:0000790!5.02e-07!9;CL:0000839!7.41e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.36e-15,32;CL:0002032,9.36e-15,32;CL:0000037,9.36e-15,32;CL:0000837,9.36e-15,32;CL:0002031,9.43e-14,25;CL:0002320,8.80e-10,46;CL:0000134,8.80e-10,46;CL:0000738,3.84e-09,17;CL:0002087,3.84e-09,17;CL:0000049,7.58e-09,19;CL:0000838,2.86e-08,12;CL:0000763,5.72e-08,16;CL:0000084,8.92e-08,11;CL:0000827,8.92e-08,11;CL:0000542,4.32e-07,13;CL:0000051,4.32e-07,13;CL:0000791,4.99e-07,9;CL:0000789,4.99e-07,9;CL:0002420,4.99e-07,9;CL:0002419,4.99e-07,9;CL:0000790,4.99e-07,9;CL:0000839,7.36e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.32e-23!48;UBERON:0002390!9.22e-23!45;UBERON:0003061!9.22e-23!45;UBERON:0002405!6.35e-20!70;UBERON:0003081!4.57e-16!88;UBERON:0004177!4.85e-14!29;UBERON:0002204!1.56e-12!32;UBERON:0006562!4.82e-11!24;UBERON:0001557!4.82e-11!24;UBERON:0001042!4.82e-11!24;UBERON:0008814!4.82e-11!24;UBERON:0009145!4.82e-11!24;UBERON:0005057!4.82e-11!51;UBERON:0002370!5.60e-11!23;UBERON:0000974!5.60e-11!23;UBERON:0004807!5.60e-11!23;UBERON:0005058!5.60e-11!23;UBERON:0003351!5.60e-11!23;UBERON:0009113!5.60e-11!23;UBERON:0003295!5.60e-11!23;UBERON:0009722!5.60e-11!23;UBERON:0005562!5.60e-11!23;UBERON:0007690!5.60e-11!23;UBERON:0003408!7.61e-11!24;UBERON:0002384!9.45e-10!46;UBERON:0002371!2.39e-09!16;UBERON:0001474!7.38e-09!22;UBERON:0004765!7.38e-09!22;UBERON:0001434!7.38e-09!22;UBERON:0000072!1.45e-07!27;UBERON:0002368!5.34e-07!60;UBERON:0002530!6.88e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.26e-23,48;UBERON:0002405,2.26e-23,48;UBERON:0002390,8.97e-23,45;UBERON:0003061,8.97e-23,45;UBERON:0003081,1.88e-15,87;UBERON:0004177,4.78e-14,29;UBERON:0005057,4.78e-14,29;UBERON:0000077,8.06e-13,35;UBERON:0002204,1.53e-12,32;UBERON:0006562,4.76e-11,24;UBERON:0001557,4.76e-11,24;UBERON:0001042,4.76e-11,24;UBERON:0008814,4.76e-11,24;UBERON:0009145,4.76e-11,24;UBERON:0002370,5.53e-11,23;UBERON:0000974,5.53e-11,23;UBERON:0004807,5.53e-11,23;UBERON:0005058,5.53e-11,23;UBERON:0003351,5.53e-11,23;UBERON:0009113,5.53e-11,23;UBERON:0003295,5.53e-11,23;UBERON:0009722,5.53e-11,23;UBERON:0005562,5.53e-11,23;UBERON:0007690,5.53e-11,23;UBERON:0003408,7.52e-11,24;UBERON:0000926,2.12e-10,120;UBERON:0004120,2.12e-10,120;UBERON:0006603,2.12e-10,120;UBERON:0002384,8.80e-10,46;UBERON:0002371,2.36e-09,16;UBERON:0001474,7.31e-09,22;UBERON:0004765,7.31e-09,22;UBERON:0001434,7.31e-09,22;UBERON:0000072,1.10e-07,27;UBERON:0002368,5.08e-07,60;UBERON:0002530,6.55e-07,65 | |||
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| |||
|short_description=p1@Apbb1ip | |||
}} |
Revision as of 23:21, 13 September 2013
Short description: | p1@Apbb1ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Apbb1ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000148315_5end |
EntrezGene: | Apbb1ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.36e-15 | 32 |
hematopoietic oligopotent progenitor cell | 9.36e-15 | 32 |
hematopoietic stem cell | 9.36e-15 | 32 |
hematopoietic multipotent progenitor cell | 9.36e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 9.43e-14 | 25 |
connective tissue cell | 8.80e-10 | 46 |
mesenchymal cell | 8.80e-10 | 46 |
leukocyte | 3.84e-09 | 17 |
nongranular leukocyte | 3.84e-09 | 17 |
common myeloid progenitor | 7.58e-09 | 19 |
lymphoid lineage restricted progenitor cell | 2.86e-08 | 12 |
myeloid cell | 5.72e-08 | 16 |
T cell | 8.92e-08 | 11 |
pro-T cell | 8.92e-08 | 11 |
lymphocyte | 4.32e-07 | 13 |
common lymphoid progenitor | 4.32e-07 | 13 |
mature alpha-beta T cell | 4.99e-07 | 9 |
alpha-beta T cell | 4.99e-07 | 9 |
immature T cell | 4.99e-07 | 9 |
mature T cell | 4.99e-07 | 9 |
immature alpha-beta T cell | 4.99e-07 | 9 |
myeloid lineage restricted progenitor cell | 7.36e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.