FFCP PHASE1:Hg19::chr8:117778736..117778808,+: Difference between revisions
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{{FFCP | 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2239124945,8.41873721914798,11.3566408405786,23.3069994792837,14.7964698048699,9.91778309467804,10.6551784990768,13.4283035107824,29.857877949789,13.7898407632745,37.6737765536386,14.4727472721947,22.7928998270187,16.7835213295696,11.1502010831028,11.7871098550455,11.3992012771296,11.8505382909179,25.0247769434633,8.3789932800937,9.96486302350223,13.2487969347234,25.5535682100202,17.6956494302678,8.24117281098646,12.5992059388606,47.2644362545044,15.4993481694734,14.7554147927377,29.0887401397908,8.95228849404445,9.33115890049459,31.589909712002,14.556349538552,17.4565195460045,27.4116191861955,10.6931493871036,12.9670701262027,20.0775938099584,26.2563111447425,9.85813487025598,12.2235704751943,30.4216884348478,10.5802783107205,11.3310826620684,18.6264752779733,36.8411098446521,29.8515316436873,21.74233460952,20.6698790901809,11.3417894041317,21.7992121602999,15.704636228507,25.3221113732646,34.8010683875834,18.7097170492113,28.0727368745322,12.9669912458837,31.7565565987646,267.940151190622,20.758050624395,20.9773271451661,10.9411961572633,12.3096146406269,20.1439458537419,22.6219811912079,17.3571592469274,28.8998896487124,22.9422344116314,13.8880624324656,21.3320175517106,14.2547019382867,13.8939129949002,28.8428840749778,20.825275705254,20.3566697633749,25.8938466108494,18.8159337313356,22.5385569437785,14.9019981873233,33.5330903787318,13.7190407549935,17.6721305739762,10.3920982229302,11.9375779292808,30.9223297259952,19.7802593983295,30.4804244437044,35.3142925775374,13.6973808076424,8.63710364874486,16.7213090760468,10.6500050823218,15.8013611732727,16.3900409769057,54.5914975030099,16.8359386593353,12.8474021781083,11.7795749194825,8.2951159417691,7.744092458765,12.1881960752482,11.8446632615229,19.0524172585918,29.5547860421825,7.755159641608,11.4664672677292,13.6463626793307,26.7950137769613,16.7027557225709,13.5960055809458,14.4754557667308,11.598144313382,20.3998617084839,13.33454941734,28.4499608480757,30.8003035113903,33.996770693727,19.0197093969592,25.0598320320678,11.3446012418679,17.0476457193087,15.0501534835687,16.6700858792656,18.1470941268252,16.8825281718853,21.0902944232231,10.566393189585,12.7445336015863,16.2592178105147,6.57470457330487,15.7907026361388,28.0329683610882,25.0555358918141,28.8868920081006,9.49437304720472,13.3031492187317,21.3575978895662,29.3455105679323,11.966502273601,16.144975542594,12.1676173318542,17.4837658538373,17.1004982593625,10.3830374909709,12.2381432090027,10.4894949085148,12.0363575960865,22.8454978622039,12.0247832369502,18.6546646055735,15.5438674361273,15.3830757383026,8.84281629515389,23.2167443048458,23.1689910730645,10.2352311312471,19.5212833800267,14.9200381721174,12.9736152878343,24.2204823174125,17.9484986344425,14.1482032270753,12.4098546301268,15.0582652477524,9.1598792099839,15.6354407756034,14.3043953314786,17.6645092885815,14.9418284228802,3.8614456457388,17.3362640065713,25.81050366438,20.5365626227216,17.9034318458925,19.9727032255654,16.9069986616462,13.1433081844326|short_description=p1@UTP23}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28224 | |||
|TSSclassifier=S | |||
|UniProt=Q9BRU9,E5RGP0,E5RH13,E5RIC4 | |||
|association_with_transcript=0bp_to_ENST00000309822,ENST00000357148,ENST00000517814,ENST00000519443,ENST00000521071,ENST00000521703,NM_032334,uc003yoc.2_5end | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_1_at_UTP23_5end | |||
|id=chr8:117778736..117778808,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.05e-16!53;CL:0000051!2.05e-16!53;CL:0000838!4.91e-16!52;CL:0000037!1.11e-14!172;CL:0000566!1.11e-14!172;CL:0002032!3.91e-13!165;CL:0000837!3.91e-13!165;CL:0000988!1.58e-11!182;CL:0000084!1.30e-10!25;CL:0000827!1.30e-10!25;CL:0000791!1.58e-09!18;CL:0000789!1.58e-09!18;CL:0002420!1.58e-09!18;CL:0002419!1.58e-09!18;CL:0000790!1.58e-09!18;CL:0000738!2.11e-09!140;CL:0002031!3.87e-09!124;CL:0002087!4.76e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.45e-10;25!CL:0000542;9.30e-10;53!CL:0000791;1.68e-09;18!CL:0000789;1.68e-09;18!CL:0002419;1.68e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.05e-16,53;CL:0000051,2.05e-16,53;CL:0000838,4.91e-16,52;CL:0000037,5.35e-14,168;CL:0002032,1.77e-12,161;CL:0000837,1.77e-12,161;CL:0000988,2.66e-11,177;CL:0000084,1.30e-10,25;CL:0000827,1.30e-10,25;CL:0000791,1.58e-09,18;CL:0000789,1.58e-09,18;CL:0002420,1.58e-09,18;CL:0002419,1.58e-09,18;CL:0000790,1.58e-09,18;CL:0000738,8.15e-09,136;CL:0002031,1.51e-08,120;CL:0002087,1.86e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000051;9.30e-10;53!CL:0000790;1.68e-09;18 | |||
|ontology_enrichment_disease=DOID:162!8.48e-21!235;DOID:14566!3.63e-19!239;DOID:0050687!3.01e-12!143;DOID:0050686!8.96e-12!137;DOID:2531!1.24e-11!51;DOID:0060083!1.24e-11!51;DOID:305!3.94e-11!106;DOID:1240!7.17e-11!39;DOID:8692!3.13e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.92e-08;39!DOID:8692;7.58e-08;31!DOID:2531;3.17e-07;51!DOID:0060083;3.17e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.48e-21,235;DOID:14566,3.63e-19,239;DOID:0050687,3.01e-12,143;DOID:0050686,8.96e-12,137;DOID:2531,1.24e-11,51;DOID:0060083,1.24e-11,51;DOID:305,3.94e-11,106;DOID:1240,7.17e-11,39;DOID:8692,3.13e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.22e-08!41;UBERON:0001890!1.22e-08!41;UBERON:0006240!1.22e-08!41;UBERON:0003080!5.45e-08!42;UBERON:0001049!1.31e-07!57;UBERON:0005068!1.31e-07!57;UBERON:0006241!1.31e-07!57;UBERON:0007135!1.31e-07!57;UBERON:0002020!2.64e-07!34;UBERON:0003528!2.64e-07!34;UBERON:0001893!9.83e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@UTP23 | |||
}} |
Revision as of 03:15, 14 September 2013
Short description: | p1@UTP23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UTP23_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 0bp_to_ENST00000309822, ENST00000357148, ENST00000517814, ENST00000519443, ENST00000521071, ENST00000521703, NM_032334, uc003yoc.2_5end |
EntrezGene: | UTP23 |
HGNC: | 28224 |
UniProt: | Q9BRU9E5RGP0E5RH13E5RIC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.05e-16 | 53 |
common lymphoid progenitor | 2.05e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.91e-16 | 52 |
hematopoietic stem cell | 5.35e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.77e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-12 | 161 |
hematopoietic cell | 2.66e-11 | 177 |
T cell | 1.30e-10 | 25 |
pro-T cell | 1.30e-10 | 25 |
mature alpha-beta T cell | 1.58e-09 | 18 |
alpha-beta T cell | 1.58e-09 | 18 |
immature T cell | 1.58e-09 | 18 |
mature T cell | 1.58e-09 | 18 |
immature alpha-beta T cell | 1.58e-09 | 18 |
leukocyte | 8.15e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.51e-08 | 120 |
nongranular leukocyte | 1.86e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.22e-08 | 41 |
forebrain | 1.22e-08 | 41 |
anterior neural tube | 1.22e-08 | 41 |
future forebrain | 1.22e-08 | 41 |
regional part of nervous system | 3.34e-08 | 53 |
regional part of brain | 3.34e-08 | 53 |
neural tube | 3.93e-08 | 56 |
neural rod | 3.93e-08 | 56 |
future spinal cord | 3.93e-08 | 56 |
neural keel | 3.93e-08 | 56 |
brain grey matter | 2.64e-07 | 34 |
gray matter | 2.64e-07 | 34 |
nervous system | 3.35e-07 | 89 |
brain | 5.29e-07 | 68 |
future brain | 5.29e-07 | 68 |
regional part of telencephalon | 7.03e-07 | 32 |
central nervous system | 8.08e-07 | 81 |
telencephalon | 9.83e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.48e-21 | 235 |
disease of cellular proliferation | 3.63e-19 | 239 |
cell type cancer | 3.01e-12 | 143 |
organ system cancer | 8.96e-12 | 137 |
hematologic cancer | 1.24e-11 | 51 |
immune system cancer | 1.24e-11 | 51 |
carcinoma | 3.94e-11 | 106 |
leukemia | 7.17e-11 | 39 |
myeloid leukemia | 3.13e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.