FFCP PHASE1:Mm9::chr4:108453245..108453365,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230597|HGNC=|UniProt=A2A8R0|association_with_transcript=37bp_to_ENSMUST00000106657_5end|description=CAGE_peak_1_at_Zfyve9_5end|id=chr4:108453245..108453365,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.22e-11!333;UBERON:0000033!8.98e-11!63;UBERON:0004121!1.42e-09!102;UBERON:0000924!1.42e-09!102;UBERON:0006601!1.42e-09!102;UBERON:0001017!5.59e-09!73;UBERON:0005743!5.59e-09!73;UBERON:0000955!1.22e-08!50;UBERON:0006238!1.22e-08!50;UBERON:0001049!1.84e-08!52;UBERON:0005068!1.84e-08!52;UBERON:0006241!1.84e-08!52;UBERON:0007135!1.84e-08!52;UBERON:0000073!2.13e-08!75;UBERON:0001016!2.13e-08!75;UBERON:0002616!2.22e-08!49;UBERON:0002020!3.44e-08!34;UBERON:0000922!4.44e-08!328;UBERON:0002346!1.24e-07!71;UBERON:0003075!1.24e-07!71;UBERON:0007284!1.24e-07!71;UBERON:0002791!3.61e-07!29;UBERON:0003528!3.61e-07!29;UBERON:0001893!3.61e-07!29;UBERON:0004111!5.86e-07!122;UBERON:0003056!8.51e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.45e-11,73;UBERON:0004121,6.28e-11,95;UBERON:0000924,6.28e-11,95;UBERON:0006601,6.28e-11,95;UBERON:0010314,5.56e-10,92;UBERON:0000073,1.88e-09,54;UBERON:0002346,3.48e-09,64;UBERON:0003075,3.48e-09,64;UBERON:0007284,3.48e-09,64;UBERON:0001017,5.89e-09,73;UBERON:0001049,1.83e-08,52;UBERON:0005068,1.83e-08,52;UBERON:0006241,1.83e-08,52;UBERON:0007135,1.83e-08,52;UBERON:0001016,2.24e-08,75;UBERON:0002020,3.41e-08,34;UBERON:0000955,3.51e-07,47;UBERON:0006238,3.51e-07,47;UBERON:0003528,3.58e-07,29;UBERON:0002791,3.58e-07,29;UBERON:0001893,3.58e-07,29;UBERON:0004111,5.83e-07,122;UBERON:0002616,6.19e-07,46;UBERON:0000922,7.82e-07,320;UBERON:0003056,8.46e-07,49|phase1_expression=29.7876855614917,12.2141392673776,22.7499619694768,36.9006337794333,42.5761370454395,13.4303417529512,10.0453435456076,0,0,0.234064526321993,0,0.319088635981346,0.171200729931206,0,3.33109761815663,1.82227740650843,0,2.36596624018678,1.09691546884591,1.69755860719212,13.5218831340201,0.595745707205312,0,4.31979541542198,7.11168771308227,14.9300310669905,12.0613358924541,11.2045040996662,13.6816862008589,17.8941392129551,5.54326276638262,0,0,0,16.1756907060714,10.6390173029435,17.3543952823014,1.25559489221072,4.6880120671428,5.23523743973798,0,0,0.485510353031154,5.91715044485213,5.17022349219524,4.58866880404204,1.56478268869608,1.52617609466313,3.29529274101708,6.80504646759992,4.89952475688769,1.43752564364972,0,0,0,7.20326420900652,10.601737277734,5.67239301505187,18.613114399083,22.7466121086974,13.9442908771359,2.37191172448392,2.66788438833342,0.449949858640699,0,0.7104801149461,0.599200221036809,4.61061966385865,18.0419925416751,17.5507719831198,13.6711224878398,15.4251531578054,14.5773237028065,16.9037302916637,10.0637744569148,19.3035945188104,31.9336054898227,37.7954520732156,37.3263875812672,15.5625819521629,14.2720724019759,16.6692278578163,32.6644108831616,20.2594539611405,23.0725354142983,23.5702868378934,20.0744069926735,27.9599168737951,8.10270268665069,9.06858721281426,27.8269909153611,15.487629785665,7.47968467078526,8.63525106620507,10.3964226791627,20.6092368064774,14.1848864333069,5.79463096765396,4.1565760736459,8.48014978824817,32.8165168079666,7.69958864485907,10.1922095882658,7.11066703153331,6.061749148314,3.54703811665138,2.52762222507392,16.0999270403875,6.21450920753212,12.6175818205101,11.2765462397988,6.69824052286711,7.37969591219387,7.68685466818375,13.7578787348775,13.6976584549346,3.46072954828123,13.4477401935518,11.4999371753484,16.0149181447935,16.3422723660691,12.1218813283806,3.72783522436244,38.6470652055242,39.3759808809296,12.7728527604296,1.07833612055328,0,0.889491589511453,30.8568717173935,23.7900313465686,12.5654352112864,28.6810128317256,30.94157033697,27.0124457927428,21.7403292510795,16.3961375799009,13.0627319140598,5.55990068554084,13.6787206326208,14.9638509407109,15.1735388926092,16.3856538122868,13.7141384230501,18.9141467640691,16.2704424761759,18.5529414628263,20.6962696591213,15.3053274982318,23.070941780474,18.8267702855425,15.1245055375027,15.2925987074079,21.5916343243743,19.7550850951626,15.723707078661,0.702213187313235,1.80143534980301,2.27330799516474,11.8061690345236,11.7263029990548,12.42428224081,15.1516630774535,15.3476100762975,12.9584374825398,17.4400458562806,20.1205051049714,19.7333428600516,17.114224391002,17.5659186564632,25.5366750069446,24.7077978748812,26.5655639502171,22.8150911892632,25.2347938276953,19.3460671273055,26.10308385572,15.073682299822,19.6225190492415,18.1144604051142,17.3971072784826,20.1683524623343,22.4601824283319,19.403013863481,23.7264530772256,24.5401442538776,27.6468729680296,25.068515477185,23.3956904542944,19.7740269903929,16.6426298403515,21.1089749649629,11.1904061562318,13.0243304375091,14.6520056375005,15.4775009162439,14.7403890247396,16.6923251338958,15.0502958355732,17.7132177575523,15.2288766006134,17.3990001129739,16.3048944897932,4.67166296005063,4.324297892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| ||
|EntrezGene=230597 | |||
|HGNC= | |||
|UniProt=A2A8R0 | |||
|association_with_transcript=37bp_to_ENSMUST00000106657_5end | |||
|description=CAGE_peak_1_at_Zfyve9_5end | |||
|id=chr4:108453245..108453365,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.22e-11!333;UBERON:0000033!8.98e-11!63;UBERON:0004121!1.42e-09!102;UBERON:0000924!1.42e-09!102;UBERON:0006601!1.42e-09!102;UBERON:0001017!5.59e-09!73;UBERON:0005743!5.59e-09!73;UBERON:0000955!1.22e-08!50;UBERON:0006238!1.22e-08!50;UBERON:0001049!1.84e-08!52;UBERON:0005068!1.84e-08!52;UBERON:0006241!1.84e-08!52;UBERON:0007135!1.84e-08!52;UBERON:0000073!2.13e-08!75;UBERON:0001016!2.13e-08!75;UBERON:0002616!2.22e-08!49;UBERON:0002020!3.44e-08!34;UBERON:0000922!4.44e-08!328;UBERON:0002346!1.24e-07!71;UBERON:0003075!1.24e-07!71;UBERON:0007284!1.24e-07!71;UBERON:0002791!3.61e-07!29;UBERON:0003528!3.61e-07!29;UBERON:0001893!3.61e-07!29;UBERON:0004111!5.86e-07!122;UBERON:0003056!8.51e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.45e-11,73;UBERON:0004121,6.28e-11,95;UBERON:0000924,6.28e-11,95;UBERON:0006601,6.28e-11,95;UBERON:0010314,5.56e-10,92;UBERON:0000073,1.88e-09,54;UBERON:0002346,3.48e-09,64;UBERON:0003075,3.48e-09,64;UBERON:0007284,3.48e-09,64;UBERON:0001017,5.89e-09,73;UBERON:0001049,1.83e-08,52;UBERON:0005068,1.83e-08,52;UBERON:0006241,1.83e-08,52;UBERON:0007135,1.83e-08,52;UBERON:0001016,2.24e-08,75;UBERON:0002020,3.41e-08,34;UBERON:0000955,3.51e-07,47;UBERON:0006238,3.51e-07,47;UBERON:0003528,3.58e-07,29;UBERON:0002791,3.58e-07,29;UBERON:0001893,3.58e-07,29;UBERON:0004111,5.83e-07,122;UBERON:0002616,6.19e-07,46;UBERON:0000922,7.82e-07,320;UBERON:0003056,8.46e-07,49 | |||
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| |||
|short_description=p1@Zfyve9 | |||
}} |
Revision as of 03:24, 14 September 2013
Short description: | p1@Zfyve9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfyve9_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENSMUST00000106657_5end |
EntrezGene: | Zfyve9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.45e-11 | 73 |
ectoderm-derived structure | 6.28e-11 | 95 |
ectoderm | 6.28e-11 | 95 |
presumptive ectoderm | 6.28e-11 | 95 |
structure with developmental contribution from neural crest | 5.56e-10 | 92 |
regional part of nervous system | 1.88e-09 | 54 |
neurectoderm | 3.48e-09 | 64 |
neural plate | 3.48e-09 | 64 |
presumptive neural plate | 3.48e-09 | 64 |
central nervous system | 5.89e-09 | 73 |
neural tube | 1.83e-08 | 52 |
neural rod | 1.83e-08 | 52 |
future spinal cord | 1.83e-08 | 52 |
neural keel | 1.83e-08 | 52 |
nervous system | 2.24e-08 | 75 |
gray matter | 3.41e-08 | 34 |
brain | 3.51e-07 | 47 |
future brain | 3.51e-07 | 47 |
brain grey matter | 3.58e-07 | 29 |
regional part of telencephalon | 3.58e-07 | 29 |
telencephalon | 3.58e-07 | 29 |
anatomical conduit | 5.83e-07 | 122 |
regional part of brain | 6.19e-07 | 46 |
embryo | 7.82e-07 | 320 |
pre-chordal neural plate | 8.46e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.