FFCP PHASE1:Mm9::chr4:114581876..114581927,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100040736|HGNC=|MCL_coexpression_id=2392|UniProt=|association_with_transcript=0bp_to_NR_030721,uc008ued.2,uc008uee.2,uc012diy.1_5end|description=CAGE_peak_1_at_9130206I24Rik_5end|id=chr4:114581876..114581927,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!3.61e-07!14;UBERON:0003918!3.61e-07!14;UBERON:0005095!3.61e-07!14;UBERON:0007687!3.61e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.46e-08,14;UBERON:0003918,3.46e-08,14;UBERON:0011143,3.46e-08,14;UBERON:0005095,3.46e-08,14;UBERON:0007687,3.46e-08,14|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0,0.513602189793617,0.34968160967599,4.99664642723494,4.25198061518635,9.79386629379405,1.73504190947031,0.685572168028694,1.69755860719212,0.765389611359628,1.78723712161594,5.74639536105658,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,2.3108129580102,2.99222361645286,1.63335485009895,1.25559489221072,3.906676722619,1.57057123192139,1.17646297606203,2.04913645487534,0.971020706062307,0.251793635951155,0.608261587317087,0.183546752161682,3.12956537739216,0,0,0.388859798148567,3.63964696225943,2.87505128729943,0.335565212115473,0,0.672187598284928,0.514518872071894,0,1.03134418455488,0.202316460859598,0,0,5.42151251310611,9.78224275722253,1.7997994345628,0.988866362566974,2.1314403448383,3.59520132622086,2.30530983192933,0.103689612308478,0.135005938331691,0,1.42825492201902,2.42955395046775,0,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.457438218012048,0.52091337055676,0.279182999001381,2.25105044012672,0.61119299110724,0.883885756421003,2.56269025438385,0,1.13589289999776,2.56943304363071,2.6087803983151,1.72084775396277,0,0.539703191637817,0,0.448026887097336,0.842666520790511,2.21559419351475,4.1565760736459,4.24007489412408,2.11265129665021,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.79928715803342,1.29468941823586,1.48442139064825,3.29622120855658,2.74018930480927,2.07553947530453,1.65794904607885,1.99900802130698,1.38233250462643,0.247194967734374,1.44599356919912,1.76922110389975,2.91180329905337,1.54589062922275,1.93950101254089,24.2309289583559,0,0,0.255457055208591,4.07371423320129,3.59941638596045,2.1601938602421,0,0,0.251308704225729,0,0,0,0.162241263067758,3.66621709861139,2.48813941220186,1.0108910337347,0.631325567659422,4.55421550369463,3.44853156650209,1.98068342785884,3.76762044589288,2.9255694635071,3.07472928683639,3.37326208415024,1.29351685369508,0.646703978798527,0.378212160335639,1.75951124163949,1.7535658594206,1.94633074457919,2.43776516565517,1.64625709126355,1.79130840136644,0.702213187313235,0.51469581422943,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,0.710234206755631,0.590292695242212,0.771335564436891,0.465067889500816,1.3413670069981,0.467061369468678,0.658239399653922,1.97000956894914,0.405344047729279,0.438599962275997,1.75640092232841,0.402619256281115,0,0.102904612379284,0,0.264450566663544,1.2797295032114,1.16118335930219,1.54640953586512,1.00841762311671,1.33426826306922,2.28270751335071,0,0.823494773620054,3.51869292320377,2.78539060857611,2.14460495831032,0,8.64552199498777,7.36822711041159,9.86273084956025,11.0821057231437,14.6520056375005,8.34970444165788,10.861339281387,8.97738494596078,6.26041717530147,2.65698266363284,4.55296310739987,2.22114895059241,0,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0.739012760666419,0.947457058852424,0.814824882210129,0.339490171550376,0.469380496577004,0.837531287209079,0.238043640886014,0.390267295715598,2.36452716159286,1.10732344824387,1.43509291791738,0,1.38147985492716,0.578596234326046,0,1.63171705145613,0,1.10374698521893,0.321101179975584,0.117211686592203,7.21313759657372,1.00988370881749,3.47059041357882,2.34263246577983,9.69405289797595,1.43381278771531,0.891194696329576,1.41538265394416,3.64329631507405,2.92255857911312,1.18586333383957,0.963963949265421,0.709700426041343,0.890328018336276,0.977321756121456,0.329940245945071,1.32745138339963,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.680879211507576,5.58189391497062,5.17434735131018,5.14408884075822,6.20690817747958,6.24290861607247,8.22745103010605,1.8267896946876,0.938686832254841,0.42366414172764,0.882113592219848,1.48397627647332,2.09903754704677,1.93001359770099,1.19372344003136,0.328281799490123,0,0.556275906031529,3.75915937755276,0,0.185194527369712,0.941842285023455,1.77702496037333,2.0590035588587,4.75939603982795,4.3384950220334,3.73139929271944,0,0.790839983952838,0.813277868507395,0,0.418176592028937,0,0.539457385539283,0.247960367176008,0,18.2757112341428,0,0,0.747582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| ||
|EntrezGene=100040736 | |||
|HGNC= | |||
|MCL_coexpression_id=2392 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_030721,uc008ued.2,uc008uee.2,uc012diy.1_5end | |||
|description=CAGE_peak_1_at_9130206I24Rik_5end | |||
|id=chr4:114581876..114581927,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.61e-07!14;UBERON:0003918!3.61e-07!14;UBERON:0005095!3.61e-07!14;UBERON:0007687!3.61e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.46e-08,14;UBERON:0003918,3.46e-08,14;UBERON:0011143,3.46e-08,14;UBERON:0005095,3.46e-08,14;UBERON:0007687,3.46e-08,14 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0,0,0,0.513602189793617,0.34968160967599,4.99664642723494,4.25198061518635,9.79386629379405,1.73504190947031,0.685572168028694,1.69755860719212,0.765389611359628,1.78723712161594,5.74639536105658,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,2.3108129580102,2.99222361645286,1.63335485009895,1.25559489221072,3.906676722619,1.57057123192139,1.17646297606203,2.04913645487534,0.971020706062307,0.251793635951155,0.608261587317087,0.183546752161682,3.12956537739216,0,0,0.388859798148567,3.63964696225943,2.87505128729943,0.335565212115473,0,0.672187598284928,0.514518872071894,0,1.03134418455488,0.202316460859598,0,0,5.42151251310611,9.78224275722253,1.7997994345628,0.988866362566974,2.1314403448383,3.59520132622086,2.30530983192933,0.103689612308478,0.135005938331691,0,1.42825492201902,2.42955395046775,0,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.457438218012048,0.52091337055676,0.279182999001381,2.25105044012672,0.61119299110724,0.883885756421003,2.56269025438385,0,1.13589289999776,2.56943304363071,2.6087803983151,1.72084775396277,0,0.539703191637817,0,0.448026887097336,0.842666520790511,2.21559419351475,4.1565760736459,4.24007489412408,2.11265129665021,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.79928715803342,1.29468941823586,1.48442139064825,3.29622120855658,2.74018930480927,2.07553947530453,1.65794904607885,1.99900802130698,1.38233250462643,0.247194967734374,1.44599356919912,1.76922110389975,2.91180329905337,1.54589062922275,1.93950101254089,24.2309289583559,0,0,0.255457055208591,4.07371423320129,3.59941638596045,2.1601938602421,0,0,0.251308704225729,0,0,0,0.162241263067758,3.66621709861139,2.48813941220186,1.0108910337347,0.631325567659422,4.55421550369463,3.44853156650209,1.98068342785884,3.76762044589288,2.9255694635071,3.07472928683639,3.37326208415024,1.29351685369508,0.646703978798527,0.378212160335639,1.75951124163949,1.7535658594206,1.94633074457919,2.43776516565517,1.64625709126355,1.79130840136644,0.702213187313235,0.51469581422943,1.70498099637356,0.207125772535502,0.234526059981096,0.720248245844059,0.710234206755631,0.590292695242212,0.771335564436891,0.465067889500816,1.3413670069981,0.467061369468678,0.658239399653922,1.97000956894914,0.405344047729279,0.438599962275997,1.75640092232841,0.402619256281115,0,0.102904612379284,0,0.264450566663544,1.2797295032114,1.16118335930219,1.54640953586512,1.00841762311671,1.33426826306922,2.28270751335071,0,0.823494773620054,3.51869292320377,2.78539060857611,2.14460495831032,0,8.64552199498777,7.36822711041159,9.86273084956025,11.0821057231437,14.6520056375005,8.34970444165788,10.861339281387,8.97738494596078,6.26041717530147,2.65698266363284,4.55296310739987,2.22114895059241,0,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0.739012760666419,0.947457058852424,0.814824882210129,0.339490171550376,0.469380496577004,0.837531287209079,0.238043640886014,0.390267295715598,2.36452716159286,1.10732344824387,1.43509291791738,0,1.38147985492716,0.578596234326046,0,1.63171705145613,0,1.10374698521893,0.321101179975584,0.117211686592203,7.21313759657372,1.00988370881749,3.47059041357882,2.34263246577983,9.69405289797595,1.43381278771531,0.891194696329576,1.41538265394416,3.64329631507405,2.92255857911312,1.18586333383957,0.963963949265421,0.709700426041343,0.890328018336276,0.977321756121456,0.329940245945071,1.32745138339963,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.680879211507576,5.58189391497062,5.17434735131018,5.14408884075822,6.20690817747958,6.24290861607247,8.22745103010605,1.8267896946876,0.938686832254841,0.42366414172764,0.882113592219848,1.48397627647332,2.09903754704677,1.93001359770099,1.19372344003136,0.328281799490123,0,0.556275906031529,3.75915937755276,0,0.185194527369712,0.941842285023455,1.77702496037333,2.0590035588587,4.75939603982795,4.3384950220334,3.73139929271944,0,0.790839983952838,0.813277868507395,0,0.418176592028937,0,0.539457385539283,0.247960367176008,0,18.2757112341428,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.645799117388655,0.168956125490778,0.117357238645754,1.0416350787516,0.314578033277133,0.241584120826006,0,0.948033361884535,0.608175645870493,0.924398614483445,0.909445760844565,0.716106782669926,0.79472541912506,0.480781798079875,0.295379054349154,0.302899349844443,0.381034033274999,0.302478555410522,0.584747284438515,1.05833025804362,1.75315353272353,0.453460767230423,0.665957860122194,1.07656627931371,0,0.579568782096571,0.93841237725591,1.09890974560359,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,5.18936737920883,3.59122386060928,3.07320490357441,2.67417388775123,1.4672921383958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| |||
|short_description=p1@9130206I24Rik | |||
}} | |||
Revision as of 03:28, 14 September 2013
| Short description: | p1@9130206I24Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_9130206I24Rik_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2392 |
| Association with transcript: | 0bp_to_NR_030721, uc008ued.2, uc008uee.2, uc012diy.1_5end |
| EntrezGene: | 9130206I24Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney | 3.46e-08 | 14 |
| kidney mesenchyme | 3.46e-08 | 14 |
| upper urinary tract | 3.46e-08 | 14 |
| kidney rudiment | 3.46e-08 | 14 |
| kidney field | 3.46e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
