FFCP PHASE1:Mm9::chr4:154772168..154772189,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14403|HGNC=|MCL_coexpression_id=39|UniProt=P22933,Q14AH9|association_with_transcript=0bp_to_NM_008072,uc008wdf.2_5end|description=CAGE_peak_1_at_Gabrd_5end|id=chr4:154772168..154772189,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.82e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.40e-31!50;UBERON:0006238!5.40e-31!50;UBERON:0002616!8.37e-30!49;UBERON:0000033!8.68e-28!63;UBERON:0001049!1.40e-26!52;UBERON:0005068!1.40e-26!52;UBERON:0006241!1.40e-26!52;UBERON:0007135!1.40e-26!52;UBERON:0003080!2.50e-21!40;UBERON:0003056!3.90e-21!49;UBERON:0002346!5.23e-21!71;UBERON:0003075!5.23e-21!71;UBERON:0007284!5.23e-21!71;UBERON:0001017!6.27e-21!73;UBERON:0005743!6.27e-21!73;UBERON:0002780!2.53e-20!39;UBERON:0001890!2.53e-20!39;UBERON:0006240!2.53e-20!39;UBERON:0000073!5.05e-20!75;UBERON:0001016!5.05e-20!75;UBERON:0007811!1.45e-19!86;UBERON:0002791!5.09e-18!29;UBERON:0003528!5.09e-18!29;UBERON:0001893!5.09e-18!29;UBERON:0000153!1.13e-17!94;UBERON:0002020!2.92e-17!34;UBERON:0004121!9.02e-16!102;UBERON:0000924!9.02e-16!102;UBERON:0006601!9.02e-16!102;UBERON:0000956!1.63e-15!21;UBERON:0001869!1.63e-15!21;UBERON:0000203!1.63e-15!21;UBERON:0002021!3.54e-14!10;UBERON:0000411!3.54e-14!10;UBERON:0001950!3.54e-14!10;UBERON:0002619!1.37e-13!17;UBERON:0000064!6.20e-08!99;UBERON:0000025!6.66e-08!114;UBERON:0002298!1.19e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.94e-30,54;UBERON:0002021,1.96e-29,10;UBERON:0000411,1.96e-29,10;UBERON:0001950,1.96e-29,10;UBERON:0000955,3.35e-29,47;UBERON:0006238,3.35e-29,47;UBERON:0002616,3.32e-27,46;UBERON:0001049,1.57e-23,52;UBERON:0005068,1.57e-23,52;UBERON:0006241,1.57e-23,52;UBERON:0007135,1.57e-23,52;UBERON:0003528,3.74e-23,29;UBERON:0002791,3.74e-23,29;UBERON:0001893,3.74e-23,29;UBERON:0003080,5.10e-23,40;UBERON:0001017,8.47e-23,73;UBERON:0001016,4.72e-22,75;UBERON:0002780,2.91e-21,39;UBERON:0001890,2.91e-21,39;UBERON:0006240,2.91e-21,39;UBERON:0003056,4.12e-20,49;UBERON:0002346,4.16e-20,64;UBERON:0003075,4.16e-20,64;UBERON:0007284,4.16e-20,64;UBERON:0002619,7.53e-20,17;UBERON:0002020,3.08e-19,34;UBERON:0000956,1.08e-18,21;UBERON:0001869,1.08e-18,21;UBERON:0000203,1.08e-18,21;UBERON:0004121,8.05e-18,95;UBERON:0000924,8.05e-18,95;UBERON:0006601,8.05e-18,95;UBERON:0010371,4.93e-17,73;UBERON:0010314,1.62e-12,92;UBERON:0004684,1.82e-09,3;UBERON:0002275,1.82e-09,3;UBERON:0000025,3.73e-09,114;UBERON:0004111,3.08e-08,122|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0,0,0,0.122490799214954,0.383381884072945,0,5.50579404996943,20.1745994174597,12.4421291937557,0,0,0,6.14202597803038,0.56276261003168,1.37518422999129,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,37.7687228144896,46.2877222057736,0,0,0,0,1.19832511523858,18.3000241127451,2.76439574648302,13.210648334613,16.8772201838018,14.9607392082883,21.0913641988085,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.374806898238915,2.06962696591213,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.820481806145422,0,0.757412781613119,0,0,0,0,0,0,0,0,0,7.06906896127976,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,7.90652579663893,12.4287813856938,17.7597609166213,20.9660882459299,26.718218271055,24.9279986138601,19.5756525067224,22.516060161211,12.2348450425735,20.7104124700728,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p1@Gabrd}} | ||
|EntrezGene=14403 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=P22933,Q14AH9 | |||
|association_with_transcript=0bp_to_NM_008072,uc008wdf.2_5end | |||
|description=CAGE_peak_1_at_Gabrd_5end | |||
|id=chr4:154772168..154772189,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.82e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.40e-31!50;UBERON:0006238!5.40e-31!50;UBERON:0002616!8.37e-30!49;UBERON:0000033!8.68e-28!63;UBERON:0001049!1.40e-26!52;UBERON:0005068!1.40e-26!52;UBERON:0006241!1.40e-26!52;UBERON:0007135!1.40e-26!52;UBERON:0003080!2.50e-21!40;UBERON:0003056!3.90e-21!49;UBERON:0002346!5.23e-21!71;UBERON:0003075!5.23e-21!71;UBERON:0007284!5.23e-21!71;UBERON:0001017!6.27e-21!73;UBERON:0005743!6.27e-21!73;UBERON:0002780!2.53e-20!39;UBERON:0001890!2.53e-20!39;UBERON:0006240!2.53e-20!39;UBERON:0000073!5.05e-20!75;UBERON:0001016!5.05e-20!75;UBERON:0007811!1.45e-19!86;UBERON:0002791!5.09e-18!29;UBERON:0003528!5.09e-18!29;UBERON:0001893!5.09e-18!29;UBERON:0000153!1.13e-17!94;UBERON:0002020!2.92e-17!34;UBERON:0004121!9.02e-16!102;UBERON:0000924!9.02e-16!102;UBERON:0006601!9.02e-16!102;UBERON:0000956!1.63e-15!21;UBERON:0001869!1.63e-15!21;UBERON:0000203!1.63e-15!21;UBERON:0002021!3.54e-14!10;UBERON:0000411!3.54e-14!10;UBERON:0001950!3.54e-14!10;UBERON:0002619!1.37e-13!17;UBERON:0000064!6.20e-08!99;UBERON:0000025!6.66e-08!114;UBERON:0002298!1.19e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.94e-30,54;UBERON:0002021,1.96e-29,10;UBERON:0000411,1.96e-29,10;UBERON:0001950,1.96e-29,10;UBERON:0000955,3.35e-29,47;UBERON:0006238,3.35e-29,47;UBERON:0002616,3.32e-27,46;UBERON:0001049,1.57e-23,52;UBERON:0005068,1.57e-23,52;UBERON:0006241,1.57e-23,52;UBERON:0007135,1.57e-23,52;UBERON:0003528,3.74e-23,29;UBERON:0002791,3.74e-23,29;UBERON:0001893,3.74e-23,29;UBERON:0003080,5.10e-23,40;UBERON:0001017,8.47e-23,73;UBERON:0001016,4.72e-22,75;UBERON:0002780,2.91e-21,39;UBERON:0001890,2.91e-21,39;UBERON:0006240,2.91e-21,39;UBERON:0003056,4.12e-20,49;UBERON:0002346,4.16e-20,64;UBERON:0003075,4.16e-20,64;UBERON:0007284,4.16e-20,64;UBERON:0002619,7.53e-20,17;UBERON:0002020,3.08e-19,34;UBERON:0000956,1.08e-18,21;UBERON:0001869,1.08e-18,21;UBERON:0000203,1.08e-18,21;UBERON:0004121,8.05e-18,95;UBERON:0000924,8.05e-18,95;UBERON:0006601,8.05e-18,95;UBERON:0010371,4.93e-17,73;UBERON:0010314,1.62e-12,92;UBERON:0004684,1.82e-09,3;UBERON:0002275,1.82e-09,3;UBERON:0000025,3.73e-09,114;UBERON:0004111,3.08e-08,122 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0,0,0,0.122490799214954,0.383381884072945,0,5.50579404996943,20.1745994174597,12.4421291937557,0,0,0,6.14202597803038,0.56276261003168,1.37518422999129,0.589257170947335,0,0.186399445825301,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,37.7687228144896,46.2877222057736,0,0,0,0,1.19832511523858,18.3000241127451,2.76439574648302,13.210648334613,16.8772201838018,14.9607392082883,21.0913641988085,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0.374806898238915,2.06962696591213,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.820481806145422,0,0.757412781613119,0,0,0,0,0,0,0,0,0,7.06906896127976,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,7.90652579663893,12.4287813856938,17.7597609166213,20.9660882459299,26.718218271055,24.9279986138601,19.5756525067224,22.516060161211,12.2348450425735,20.7104124700728,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gabrd | |||
}} |
Revision as of 04:40, 14 September 2013
Short description: | p1@Gabrd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabrd_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_NM_008072, uc008wdf.2_5end |
EntrezGene: | Gabrd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.82e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.