FFCP PHASE1:Hg19::chr8:52773432..52773452,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115294|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30483|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000519975_5end|coexpression_cluster_id=C14|description=CAGE_peak_6_at_PCMTD1_5end|id=chr8:52773432..52773452,-|ontology_enrichment_celltype=CL:0000738!1.80e-07!140|ontology_enrichment_celltype_v019=CL:0000775;5.60e-21;3!CL:0000094;3.44e-08;8|ontology_enrichment_celltype_v019_2=CL:0000775,2.94e-21,3;CL:0000094,2.72e-08,8|ontology_enrichment_development_v019=UBERON:0000358;3.33e-08;1!UBERON:0010227;6.85e-08;1!UBERON:0010226;6.85e-08;1!UBERON:0005754;6.85e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.15e-15!115;UBERON:0000178!2.23e-08!15;UBERON:0000179!2.23e-08!15;UBERON:0000463!2.23e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.83e-36;15!UBERON:0000179;3.83e-36;15!UBERON:0000463;3.83e-36;15!UBERON:0002390;7.48e-15;32!UBERON:0004151;1.07e-09;3!UBERON:0002193;2.60e-08;42!UBERON:0002084;6.85e-08;1!UBERON:0002079;6.85e-08;1!UBERON:0000998;6.85e-08;1!UBERON:0006868;6.85e-08;1!UBERON:0002082;6.85e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.49e-36,15;UBERON:0000179,3.49e-36,15;UBERON:0000463,3.49e-36,15;UBERON:0004151,6.57e-10,3;UBERON:0007023,5.60e-09,114;UBERON:0002079,4.40e-08,1;UBERON:0002084,5.05e-08,1;UBERON:0002082,5.05e-08,1;UBERON:0010226,5.05e-08,1;UBERON:0000998,8.12e-08,1;UBERON:0006868,8.12e-08,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0,0,0,0,0.398927315243264,0,0.870627715885752,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0.632924774881769,0.211255286311942,0.637812899895131,0.628975936525128,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0.547992461293902,0,0.546138611262131,0.889509253863555,1.28019066769952,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.822405995998037,0,0.32592226663359,0.946895611469467,0,0,1.17842362989935,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0,0.276350017785848,0,1.18629250529648,0.267540828089713,0,0,0,0.34362744548263,1.01207876807801,0.318565414324097,0,0.950452044448374,0.301150238155546,0,1.24930726552346,0.473554504088034,1.64225599384209,0.403213486449465,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.37223371266318,0,0.0974370051611986,0,0,0.484938170456436,0,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,2.76269842704961,0,0,0,0.337169380156203,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0.502257091432126,0,0,0,0,0,0,0,0,0,1.2937654491571,0.256686072559497,0,1.30139853857622,0,0,0,8.23907726341901,2.99161459204025,1.65766205374414,0.24538298343828,0,0.542530047399471,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.74709290462411,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0.131124414959424,0,0,0.784349769176855,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.55597265731176,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.229723400206959,9.13405696617905,11.4695581071356,19.3680043639215,11.6733569974317,7.4045209155515,1.2969466223854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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30483 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000519975_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_6_at_PCMTD1_5end | |||
|id=chr8:52773432..52773452,- | |||
|ontology_enrichment_celltype=CL:0000738!1.80e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.60e-21;3!CL:0000094;3.44e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.94e-21,3;CL:0000094,2.72e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.33e-08;1!UBERON:0010227;6.85e-08;1!UBERON:0010226;6.85e-08;1!UBERON:0005754;6.85e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-15!115;UBERON:0000178!2.23e-08!15;UBERON:0000179!2.23e-08!15;UBERON:0000463!2.23e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.83e-36;15!UBERON:0000179;3.83e-36;15!UBERON:0000463;3.83e-36;15!UBERON:0002390;7.48e-15;32!UBERON:0004151;1.07e-09;3!UBERON:0002193;2.60e-08;42!UBERON:0002084;6.85e-08;1!UBERON:0002079;6.85e-08;1!UBERON:0000998;6.85e-08;1!UBERON:0006868;6.85e-08;1!UBERON:0002082;6.85e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.49e-36,15;UBERON:0000179,3.49e-36,15;UBERON:0000463,3.49e-36,15;UBERON:0004151,6.57e-10,3;UBERON:0007023,5.60e-09,114;UBERON:0002079,4.40e-08,1;UBERON:0002084,5.05e-08,1;UBERON:0002082,5.05e-08,1;UBERON:0010226,5.05e-08,1;UBERON:0000998,8.12e-08,1;UBERON:0006868,8.12e-08,1 | |||
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| |||
|short_description=p6@PCMTD1 | |||
}} |
Revision as of 05:29, 14 September 2013
Short description: | p6@PCMTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PCMTD1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000519975_5end |
EntrezGene: | PCMTD1 |
HGNC: | 30483 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.94e-21 | 3 |
granulocyte | 2.72e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 3.49e-36 | 15 |
haemolymphatic fluid | 3.49e-36 | 15 |
organism substance | 3.49e-36 | 15 |
cardiac chamber | 6.57e-10 | 3 |
adult organism | 5.60e-09 | 114 |
left cardiac atrium | 4.40e-08 | 1 |
heart left ventricle | 5.05e-08 | 1 |
cardiac ventricle | 5.05e-08 | 1 |
future cardiac ventricle | 5.05e-08 | 1 |
seminal vesicle | 8.12e-08 | 1 |
seminal fluid secreting gland | 8.12e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.