FFCP PHASE1:Mm9::chr4:89354785..89354801,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=242523|HGNC=|MCL_coexpression_id=70|UniProt=Q8CFG4|association_with_transcript=-87bp_to_ENSMUST00000052478,NM_175647,uc008tol.1_5end|description=CAGE_peak_2_at_Dmrta1_5end|id=chr4:89354785..89354801,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000710,5.27e-09,1;CL:0002077,5.27e-09,1;CL:0005014,5.27e-09,1;CL:0002315,5.27e-09,1;CL:0002490,5.27e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.55e-12!26;UBERON:0000990!1.55e-12!26;UBERON:0003133!2.33e-12!24;UBERON:0000991!3.39e-09!18;UBERON:0005564!3.39e-09!18;UBERON:0003135!1.09e-08!15;UBERON:0004176!1.13e-08!17;UBERON:0009196!1.13e-08!17;UBERON:0009117!1.13e-08!17;UBERON:0003101!6.47e-08!16;UBERON:0000079!6.47e-08!16;UBERON:0000473!9.77e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.46e-19,15;UBERON:0003101,4.01e-18,16;UBERON:0000079,4.01e-18,16;UBERON:0003133,3.07e-16,24;UBERON:0005156,5.75e-15,26;UBERON:0000990,5.75e-15,26;UBERON:0000473,9.04e-15,14;UBERON:0004176,3.55e-12,17;UBERON:0009196,3.55e-12,17;UBERON:0009117,3.55e-12,17;UBERON:0000991,1.67e-11,18;UBERON:0005564,1.67e-11,18;UBERON:0000996,2.09e-09,1;UBERON:0003886,1.59e-07,38;UBERON:0002553,2.52e-07,39|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0,0,0,0.244981598429908,0,0,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0,0.589257170947335,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,1.0108910337347,0,0.650602214813519,0.229902104433473,0,0.452114453507145,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0.567318240503458,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.631016438832513,0,0.861693590931196,0.477937595905104,0,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0.851640511249612,0,0.488660878060728,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,10.7101658349996,0.448549638131936,0.330916980914195,0.388902376688095,0.129159823477731,0,0.821500670520278,6.38001485735356,27.8925856172391,19.3267296660805,10.0810502190253,0,0.405450430580328,0,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.73260649706906,7.28852488868824,0,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.518936737920883,1.59609949360412,0,0.486213434136588,0,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.25384382367503,0,0,0,0,0,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p2@Dmrta1}} | ||
|EntrezGene=242523 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|UniProt=Q8CFG4 | |||
|association_with_transcript=-87bp_to_ENSMUST00000052478,NM_175647,uc008tol.1_5end | |||
|description=CAGE_peak_2_at_Dmrta1_5end | |||
|id=chr4:89354785..89354801,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000710,5.27e-09,1;CL:0002077,5.27e-09,1;CL:0005014,5.27e-09,1;CL:0002315,5.27e-09,1;CL:0002490,5.27e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.55e-12!26;UBERON:0000990!1.55e-12!26;UBERON:0003133!2.33e-12!24;UBERON:0000991!3.39e-09!18;UBERON:0005564!3.39e-09!18;UBERON:0003135!1.09e-08!15;UBERON:0004176!1.13e-08!17;UBERON:0009196!1.13e-08!17;UBERON:0009117!1.13e-08!17;UBERON:0003101!6.47e-08!16;UBERON:0000079!6.47e-08!16;UBERON:0000473!9.77e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.46e-19,15;UBERON:0003101,4.01e-18,16;UBERON:0000079,4.01e-18,16;UBERON:0003133,3.07e-16,24;UBERON:0005156,5.75e-15,26;UBERON:0000990,5.75e-15,26;UBERON:0000473,9.04e-15,14;UBERON:0004176,3.55e-12,17;UBERON:0009196,3.55e-12,17;UBERON:0009117,3.55e-12,17;UBERON:0000991,1.67e-11,18;UBERON:0005564,1.67e-11,18;UBERON:0000996,2.09e-09,1;UBERON:0003886,1.59e-07,38;UBERON:0002553,2.52e-07,39 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.518448061542388,0.675029691658453,0,0,0,0.244981598429908,0,0,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0,0.589257170947335,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,1.0108910337347,0,0.650602214813519,0.229902104433473,0,0.452114453507145,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0.567318240503458,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0.631016438832513,0,0.861693590931196,0.477937595905104,0,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0.851640511249612,0,0.488660878060728,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,10.7101658349996,0.448549638131936,0.330916980914195,0.388902376688095,0.129159823477731,0,0.821500670520278,6.38001485735356,27.8925856172391,19.3267296660805,10.0810502190253,0,0.405450430580328,0,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0.73260649706906,7.28852488868824,0,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.518936737920883,1.59609949360412,0,0.486213434136588,0,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.25384382367503,0,0,0,0,0,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p2@Dmrta1 | |||
}} |
Revision as of 05:35, 14 September 2013
Short description: | p2@Dmrta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dmrta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -87bp_to_ENSMUST00000052478, NM_175647, uc008tol.1_5end |
EntrezGene: | Dmrta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurecto-epithelial cell | 5.27e-09 | 1 |
ecto-epithelial cell | 5.27e-09 | 1 |
auditory epithelial support cell | 5.27e-09 | 1 |
supporting cell of cochlea | 5.27e-09 | 1 |
organ of Corti supporting cell | 5.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.46e-19 | 15 |
male organism | 4.01e-18 | 16 |
male reproductive system | 4.01e-18 | 16 |
reproductive organ | 3.07e-16 | 24 |
reproductive structure | 5.75e-15 | 26 |
reproductive system | 5.75e-15 | 26 |
testis | 9.04e-15 | 14 |
external genitalia | 3.55e-12 | 17 |
indifferent external genitalia | 3.55e-12 | 17 |
indifferent gonad | 3.55e-12 | 17 |
gonad | 1.67e-11 | 18 |
gonad primordium | 1.67e-11 | 18 |
vagina | 2.09e-09 | 1 |
body cavity precursor | 1.59e-07 | 38 |
anatomical cavity | 2.52e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.