FFCP PHASE1:Hg19::chr8:72274470..72274490,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2138|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3519|TSSclassifier=S|UniProt=Q99502|association_with_transcript=-3bp_to_ENST00000340726,NM_000503,uc003xyu.2,uc003xyv.2,uc011lfe.1_5end|description=CAGE_peak_10_at_EYA1_5end|id=chr8:72274470..72274490,-|ontology_enrichment_celltype=CL:0002552!6.93e-11!5;CL:0000035!3.66e-09!20;CL:0000062!2.91e-07!11;CL:0000375!2.91e-07!11;CL:0000335!2.91e-07!11|ontology_enrichment_celltype_v019=CL:0000333;6.04e-07;5!CL:0002552;6.04e-07;5|ontology_enrichment_celltype_v019_2=CL:0002552,5.70e-07,5|ontology_enrichment_development_v019=UBERON:0010122;2.05e-15;2!UBERON:0003056;9.90e-11;3!UBERON:0007123;6.04e-07;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;1.70e-08;4|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-08,4|ontology_enrichment_uberon=UBERON:0007023!2.37e-12!115;UBERON:0002420!1.45e-11!9;UBERON:0007245!1.45e-11!9;UBERON:0010009!1.45e-11!9;UBERON:0010011!1.45e-11!9;UBERON:0000454!1.45e-11!9;UBERON:0002308!2.61e-11!9;UBERON:0000125!2.61e-11!9;UBERON:0009663!2.79e-11!7;UBERON:0002780!1.64e-10!41;UBERON:0001890!1.64e-10!41;UBERON:0006240!1.64e-10!41;UBERON:0003080!3.63e-10!42;UBERON:0000073!4.26e-10!94;UBERON:0001016!4.26e-10!94;UBERON:0000153!8.68e-10!129;UBERON:0007811!8.68e-10!129;UBERON:0000369!8.98e-10!4;UBERON:0002435!8.98e-10!4;UBERON:0000204!8.98e-10!4;UBERON:0010082!8.98e-10!4;UBERON:0000924!9.49e-10!173;UBERON:0006601!9.49e-10!173;UBERON:0001049!1.15e-09!57;UBERON:0005068!1.15e-09!57;UBERON:0006241!1.15e-09!57;UBERON:0007135!1.15e-09!57;UBERON:0005743!1.17e-09!86;UBERON:0004121!1.59e-09!169;UBERON:0001017!2.40e-09!82;UBERON:0002346!3.21e-09!90;UBERON:0002616!3.49e-09!59;UBERON:0003075!4.69e-09!86;UBERON:0007284!4.69e-09!86;UBERON:0000955!7.26e-09!69;UBERON:0006238!7.26e-09!69;UBERON:0002020!1.37e-08!34;UBERON:0003528!1.37e-08!34;UBERON:0000033!3.07e-08!123;UBERON:0005383!7.15e-08!3;UBERON:0005382!7.15e-08!3;UBERON:0003056!9.74e-08!61;UBERON:0002791!1.18e-07!33;UBERON:0001893!2.36e-07!34;UBERON:0001869!9.51e-07!32|ontology_enrichment_uberon_v019=UBERON:0001873;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0002046;6.04e-07;5!UBERON:0000966;6.04e-07;5!UBERON:0000013;6.04e-07;5!UBERON:0002410;6.04e-07;5!UBERON:0005388;6.04e-07;5!UBERON:0001802;6.04e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.54e-15,2;UBERON:0010122,1.54e-15,2;UBERON:0005383,8.17e-11,3;UBERON:0005382,8.17e-11,3;UBERON:0000369,1.96e-08,4;UBERON:0002435,1.96e-08,4;UBERON:0000204,1.96e-08,4;UBERON:0010082,1.96e-08,4;UBERON:0002046,6.04e-07,5;UBERON:0004117,6.04e-07,5;UBERON:0007689,6.04e-07,5;UBERON:0007123,6.04e-07,5;UBERON:0003091,6.04e-07,5;UBERON:0000013,6.39e-07,5;UBERON:0002410,6.39e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,2.27407504055985,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.742585499285292,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.281338832821026,1.11308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.442306057399416,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0.508039992394707,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3519 | |||
|TSSclassifier=S | |||
|UniProt=Q99502 | |||
|association_with_transcript=-3bp_to_ENST00000340726,NM_000503,uc003xyu.2,uc003xyv.2,uc011lfe.1_5end | |||
|description=CAGE_peak_10_at_EYA1_5end | |||
|id=chr8:72274470..72274490,- | |||
|ontology_enrichment_celltype=CL:0002552!6.93e-11!5;CL:0000035!3.66e-09!20;CL:0000062!2.91e-07!11;CL:0000375!2.91e-07!11;CL:0000335!2.91e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.04e-07;5!CL:0002552;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.05e-15;2!UBERON:0003056;9.90e-11;3!UBERON:0007123;6.04e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-12!115;UBERON:0002420!1.45e-11!9;UBERON:0007245!1.45e-11!9;UBERON:0010009!1.45e-11!9;UBERON:0010011!1.45e-11!9;UBERON:0000454!1.45e-11!9;UBERON:0002308!2.61e-11!9;UBERON:0000125!2.61e-11!9;UBERON:0009663!2.79e-11!7;UBERON:0002780!1.64e-10!41;UBERON:0001890!1.64e-10!41;UBERON:0006240!1.64e-10!41;UBERON:0003080!3.63e-10!42;UBERON:0000073!4.26e-10!94;UBERON:0001016!4.26e-10!94;UBERON:0000153!8.68e-10!129;UBERON:0007811!8.68e-10!129;UBERON:0000369!8.98e-10!4;UBERON:0002435!8.98e-10!4;UBERON:0000204!8.98e-10!4;UBERON:0010082!8.98e-10!4;UBERON:0000924!9.49e-10!173;UBERON:0006601!9.49e-10!173;UBERON:0001049!1.15e-09!57;UBERON:0005068!1.15e-09!57;UBERON:0006241!1.15e-09!57;UBERON:0007135!1.15e-09!57;UBERON:0005743!1.17e-09!86;UBERON:0004121!1.59e-09!169;UBERON:0001017!2.40e-09!82;UBERON:0002346!3.21e-09!90;UBERON:0002616!3.49e-09!59;UBERON:0003075!4.69e-09!86;UBERON:0007284!4.69e-09!86;UBERON:0000955!7.26e-09!69;UBERON:0006238!7.26e-09!69;UBERON:0002020!1.37e-08!34;UBERON:0003528!1.37e-08!34;UBERON:0000033!3.07e-08!123;UBERON:0005383!7.15e-08!3;UBERON:0005382!7.15e-08!3;UBERON:0003056!9.74e-08!61;UBERON:0002791!1.18e-07!33;UBERON:0001893!2.36e-07!34;UBERON:0001869!9.51e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0002046;6.04e-07;5!UBERON:0000966;6.04e-07;5!UBERON:0000013;6.04e-07;5!UBERON:0002410;6.04e-07;5!UBERON:0005388;6.04e-07;5!UBERON:0001802;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.54e-15,2;UBERON:0010122,1.54e-15,2;UBERON:0005383,8.17e-11,3;UBERON:0005382,8.17e-11,3;UBERON:0000369,1.96e-08,4;UBERON:0002435,1.96e-08,4;UBERON:0000204,1.96e-08,4;UBERON:0010082,1.96e-08,4;UBERON:0002046,6.04e-07,5;UBERON:0004117,6.04e-07,5;UBERON:0007689,6.04e-07,5;UBERON:0007123,6.04e-07,5;UBERON:0003091,6.04e-07,5;UBERON:0000013,6.39e-07,5;UBERON:0002410,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,2.27407504055985,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.742585499285292,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.281338832821026,1.11308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.32656082487949,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0.442306057399416,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0.508039992394707,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.314727528809989,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554645257684261,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,1.02315497042921,0,0,0.655257829152084,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0.460935950223117,0.171488009437418,0,0,0,0.111231401892069,0.156986185701028,0.157115589916002,0,0,0,0.47775168788705,1.00067161847319,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17773963632631,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.869046000142011,0,0,0,0,0,0.134704106029175,0.286888821570705,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0.603821380773079,0 | |||
|short_description=p10@EYA1 | |||
}} |
Revision as of 05:59, 14 September 2013
Short description: | p10@EYA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_EYA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000340726, NM_000503, uc003xyu.2, uc003xyv.2, uc011lfe.1_5end |
EntrezGene: | EYA1 |
HGNC: | 3519 |
UniProt: | Q99502 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.54e-15 | 2 |
future caudate nucleus | 1.54e-15 | 2 |
caudate-putamen | 8.17e-11 | 3 |
dorsal striatum | 8.17e-11 | 3 |
corpus striatum | 1.96e-08 | 4 |
striatum | 1.96e-08 | 4 |
ventral part of telencephalon | 1.96e-08 | 4 |
future corpus striatum | 1.96e-08 | 4 |
thyroid gland | 6.04e-07 | 5 |
pharyngeal pouch | 6.04e-07 | 5 |
thyroid diverticulum | 6.04e-07 | 5 |
pharyngeal pouch 2 | 6.04e-07 | 5 |
thyroid primordium | 6.04e-07 | 5 |
sympathetic nervous system | 6.39e-07 | 5 |
autonomic nervous system | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.70e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.