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FFCP PHASE1:Mm9::chr6:142705278..142705295,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12764|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000144920_5end|description=CAGE_peak_2_at_Cmas_5end|id=chr6:142705278..142705295,+|ontology_enrichment_celltype=CL:0000117!2.61e-09!23;CL:0000337!2.61e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-09,23;CL:0000337,2.61e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.72e-11!52;UBERON:0005068!1.72e-11!52;UBERON:0006241!1.72e-11!52;UBERON:0007135!1.72e-11!52;UBERON:0002020!9.67e-11!34;UBERON:0000955!1.13e-10!50;UBERON:0006238!1.13e-10!50;UBERON:0002616!1.72e-10!49;UBERON:0003080!6.46e-10!40;UBERON:0002780!1.41e-09!39;UBERON:0001890!1.41e-09!39;UBERON:0006240!1.41e-09!39;UBERON:0002791!1.30e-08!29;UBERON:0003528!1.30e-08!29;UBERON:0001893!1.30e-08!29;UBERON:0000033!1.10e-07!63;UBERON:0000064!1.15e-07!99;UBERON:0000344!1.83e-07!15;UBERON:0001017!5.65e-07!73;UBERON:0005743!5.65e-07!73;UBERON:0001242!9.64e-07!13;UBERON:0000060!9.64e-07!13;UBERON:0001262!9.64e-07!13;UBERON:0004786!9.64e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.27e-12,54;UBERON:0001049,1.65e-11,52;UBERON:0005068,1.65e-11,52;UBERON:0006241,1.65e-11,52;UBERON:0007135,1.65e-11,52;UBERON:0002020,9.66e-11,34;UBERON:0003080,6.46e-10,40;UBERON:0002780,1.41e-09,39;UBERON:0001890,1.41e-09,39;UBERON:0006240,1.41e-09,39;UBERON:0000955,3.21e-09,47;UBERON:0006238,3.21e-09,47;UBERON:0002616,4.82e-09,46;UBERON:0003528,1.30e-08,29;UBERON:0002791,1.30e-08,29;UBERON:0001893,1.30e-08,29;UBERON:0000344,1.83e-07,15;UBERON:0001017,5.46e-07,73;UBERON:0001242,9.64e-07,13;UBERON:0001262,9.64e-07,13;UBERON:0004786,9.64e-07,13|phase1_expression=4.00372117761985,8.02643437570531,6.3699893514535,5.44435580352294,8.5152274090879,9.56911849897772,9.57811826441655,5.81054955487093,3.23814060948833,2.57470978954193,3.4243593645101,3.66951931378547,5.30722262786738,5.68232615723483,1.33243904726265,3.64455481301687,6.29605690315332,2.36596624018678,2.4680598049033,5.94145512517242,3.48677489619386,3.87234709683453,4.17919662622297,6.39969691173627,6.65286915094793,8.03924749761028,10.3382879078178,7.75696437669201,7.79096019771133,7.05684363327806,10.4213340007993,5.71527606113668,5.53558308826113,0,6.93243887403059,5.15327400611326,8.5751129630195,5.4409111995798,3.906676722619,4.71171369576418,4.70585190424811,2.73218193983378,7.76816564849846,1.1330713617802,1.31790010585369,0.734187008646726,0,1.52617609466313,1.75748946187577,2.3331587888914,1.95980990275508,0,3.52343472721246,3.62681071005672,4.03312558970957,3.60163210450326,2.0057340795713,4.12537673821954,9.71119012126069,6.34789175126439,13.3104594736298,2.03306719241479,1.77858959222228,5.39939830368839,3.9554654502679,4.2628806896766,1.79760066311043,2.30530983192933,2.48855069540346,3.51015439662396,3.57552434297349,9.42648248532552,6.62605622854841,3.30725157880376,4.02550978276593,11.0306254393203,6.60695285996332,14.0456071893706,11.981309593987,10.4190167306853,11.4359554503012,10.939180781692,13.6799669510677,14.069065250792,13.5990440521361,8.54422897873636,6.83384067835694,6.52398060388552,3.25622631332691,2.19157524309678,4.05810284182349,4.30211938490693,7.47968467078526,4.31762553310254,1.94932925234301,2.68816132258401,2.10666630197628,1.87473354835864,2.85764605063156,1.7666978725517,5.63373679106722,2.56652954828636,2.54805239706646,7.11066703153331,5.62876706629157,7.34743609877786,7.07734223020697,3.9964357901671,2.07150306917737,1.1875371125186,3.64319186208885,1.82679286987285,1.84492397804847,1.95939432718409,1.99900802130698,1.0053327306374,4.44950941921873,0.86759614151947,3.5384422077995,2.42650274921114,3.97514733228708,4.84875253135222,0,4.39171195517321,3.97948742945565,4.85368404896324,7.54835284387298,9.59844369589452,6.09937089950711,6.29120685500255,5.49000723382352,5.02617408451458,8.8650403298061,13.0414883238469,9.14267396062064,9.24775199486219,2.64782346010822,2.73695335342205,3.79084137650512,2.31486041475121,1.95180664444056,2.06911893990126,3.78130472591233,2.41127708537144,2.72145996605311,1.5373646434182,3.46696380870997,2.32833033665114,3.23351989399263,2.08016688184601,2.63926686245923,2.84954452155847,2.22437799380478,1.74126083261083,3.08673204611915,2.58744546864041,4.21327912387941,6.17634977075316,4.83077948972507,3.93538967817454,2.57978665979206,3.78130329068131,2.84093682702252,2.36117078096885,3.39387648352232,3.95307706075693,3.21928081679543,3.50296027101508,2.79751744852917,2.29834449710733,1.70244500046297,3.36259971078264,3.73235195994786,3.35516046900929,8.20130799400096,3.39585220851639,4.95628174475697,5.81791246659797,0.426576501070468,2.09013004674395,3.73715637834071,2.42020229548011,2.89091456998331,4.56541502670142,4.2707615539006,3.78807595865225,4.27269854960458,2.58643413653496,3.50935356814416,1.79763881730844,4.75503709724327,3.78368419183298,2.46568271239006,1.94222471436539,2.25415471346161,0.814605311381257,2.90928730751439,2.66516115583211,2.08680572510049,1.18088118383682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|EntrezGene=12764
|HGNC=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000144920_5end
|description=CAGE_peak_2_at_Cmas_5end
|id=chr6:142705278..142705295,+
|ontology_enrichment_celltype=CL:0000117!2.61e-09!23;CL:0000337!2.61e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.61e-09,23;CL:0000337,2.61e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.72e-11!52;UBERON:0005068!1.72e-11!52;UBERON:0006241!1.72e-11!52;UBERON:0007135!1.72e-11!52;UBERON:0002020!9.67e-11!34;UBERON:0000955!1.13e-10!50;UBERON:0006238!1.13e-10!50;UBERON:0002616!1.72e-10!49;UBERON:0003080!6.46e-10!40;UBERON:0002780!1.41e-09!39;UBERON:0001890!1.41e-09!39;UBERON:0006240!1.41e-09!39;UBERON:0002791!1.30e-08!29;UBERON:0003528!1.30e-08!29;UBERON:0001893!1.30e-08!29;UBERON:0000033!1.10e-07!63;UBERON:0000064!1.15e-07!99;UBERON:0000344!1.83e-07!15;UBERON:0001017!5.65e-07!73;UBERON:0005743!5.65e-07!73;UBERON:0001242!9.64e-07!13;UBERON:0000060!9.64e-07!13;UBERON:0001262!9.64e-07!13;UBERON:0004786!9.64e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.27e-12,54;UBERON:0001049,1.65e-11,52;UBERON:0005068,1.65e-11,52;UBERON:0006241,1.65e-11,52;UBERON:0007135,1.65e-11,52;UBERON:0002020,9.66e-11,34;UBERON:0003080,6.46e-10,40;UBERON:0002780,1.41e-09,39;UBERON:0001890,1.41e-09,39;UBERON:0006240,1.41e-09,39;UBERON:0000955,3.21e-09,47;UBERON:0006238,3.21e-09,47;UBERON:0002616,4.82e-09,46;UBERON:0003528,1.30e-08,29;UBERON:0002791,1.30e-08,29;UBERON:0001893,1.30e-08,29;UBERON:0000344,1.83e-07,15;UBERON:0001017,5.46e-07,73;UBERON:0001242,9.64e-07,13;UBERON:0001262,9.64e-07,13;UBERON:0004786,9.64e-07,13
|phase1_expression=4.00372117761985,8.02643437570531,6.3699893514535,5.44435580352294,8.5152274090879,9.56911849897772,9.57811826441655,5.81054955487093,3.23814060948833,2.57470978954193,3.4243593645101,3.66951931378547,5.30722262786738,5.68232615723483,1.33243904726265,3.64455481301687,6.29605690315332,2.36596624018678,2.4680598049033,5.94145512517242,3.48677489619386,3.87234709683453,4.17919662622297,6.39969691173627,6.65286915094793,8.03924749761028,10.3382879078178,7.75696437669201,7.79096019771133,7.05684363327806,10.4213340007993,5.71527606113668,5.53558308826113,0,6.93243887403059,5.15327400611326,8.5751129630195,5.4409111995798,3.906676722619,4.71171369576418,4.70585190424811,2.73218193983378,7.76816564849846,1.1330713617802,1.31790010585369,0.734187008646726,0,1.52617609466313,1.75748946187577,2.3331587888914,1.95980990275508,0,3.52343472721246,3.62681071005672,4.03312558970957,3.60163210450326,2.0057340795713,4.12537673821954,9.71119012126069,6.34789175126439,13.3104594736298,2.03306719241479,1.77858959222228,5.39939830368839,3.9554654502679,4.2628806896766,1.79760066311043,2.30530983192933,2.48855069540346,3.51015439662396,3.57552434297349,9.42648248532552,6.62605622854841,3.30725157880376,4.02550978276593,11.0306254393203,6.60695285996332,14.0456071893706,11.981309593987,10.4190167306853,11.4359554503012,10.939180781692,13.6799669510677,14.069065250792,13.5990440521361,8.54422897873636,6.83384067835694,6.52398060388552,3.25622631332691,2.19157524309678,4.05810284182349,4.30211938490693,7.47968467078526,4.31762553310254,1.94932925234301,2.68816132258401,2.10666630197628,1.87473354835864,2.85764605063156,1.7666978725517,5.63373679106722,2.56652954828636,2.54805239706646,7.11066703153331,5.62876706629157,7.34743609877786,7.07734223020697,3.9964357901671,2.07150306917737,1.1875371125186,3.64319186208885,1.82679286987285,1.84492397804847,1.95939432718409,1.99900802130698,1.0053327306374,4.44950941921873,0.86759614151947,3.5384422077995,2.42650274921114,3.97514733228708,4.84875253135222,0,4.39171195517321,3.97948742945565,4.85368404896324,7.54835284387298,9.59844369589452,6.09937089950711,6.29120685500255,5.49000723382352,5.02617408451458,8.8650403298061,13.0414883238469,9.14267396062064,9.24775199486219,2.64782346010822,2.73695335342205,3.79084137650512,2.31486041475121,1.95180664444056,2.06911893990126,3.78130472591233,2.41127708537144,2.72145996605311,1.5373646434182,3.46696380870997,2.32833033665114,3.23351989399263,2.08016688184601,2.63926686245923,2.84954452155847,2.22437799380478,1.74126083261083,3.08673204611915,2.58744546864041,4.21327912387941,6.17634977075316,4.83077948972507,3.93538967817454,2.57978665979206,3.78130329068131,2.84093682702252,2.36117078096885,3.39387648352232,3.95307706075693,3.21928081679543,3.50296027101508,2.79751744852917,2.29834449710733,1.70244500046297,3.36259971078264,3.73235195994786,3.35516046900929,8.20130799400096,3.39585220851639,4.95628174475697,5.81791246659797,0.426576501070468,2.09013004674395,3.73715637834071,2.42020229548011,2.89091456998331,4.56541502670142,4.2707615539006,3.78807595865225,4.27269854960458,2.58643413653496,3.50935356814416,1.79763881730844,4.75503709724327,3.78368419183298,2.46568271239006,1.94222471436539,2.25415471346161,0.814605311381257,2.90928730751439,2.66516115583211,2.08680572510049,1.18088118383682,2.19798218977925,2.09775178667061,5.03969466048153,2.33583148002532,3.53806191203765,4.94696647246678,4.86864291332407,5.30589751455317,5.60176873919124,3.45235364940973,4.37765112292595,4.3929826110093,2.87536413054709,4.83783231969054,1.24815069245824,2.52578877947112,2.69096120282868,1.4473305640901,2.21703828199926,3.7898282354097,1.30371981153621,2.20668611507745,2.34690248288502,2.68010011906905,1.90434912708811,3.12213836572478,2.67979744980525,2.21464689648775,2.87018583583477,2.29408640602033,2.76295970985433,2.31438493730419,4.52373851817817,4.89515115436839,4.42587845717133,3.86311444826625,5.29816946959713,7.03270119553219,2.78689407140348,1.00988370881749,2.2085575359138,0.780877488593277,1.72338718186239,1.19484398976276,1.11399337041197,1.69845918473299,2.42886421004937,2.33804686329049,0.790575555893047,4.81981974632711,2.2710413633323,1.95872164033981,4.39794790254655,1.48473110675282,2.65490276679926,1.69946445308487,1.209294227859,2.07465587731488,3.83892460745005,4.30409207121498,3.87642439752332,2.54473610634254,4.27796854061666,3.16036757935816,6.32511651449993,3.09406629744561,7.14923172082955,2.34079422240703,2.97524972700335,4.28674070063185,4.25616560741457,3.74574516964348,4.60737257685939,5.48036908406279,2.11204537257339,4.87213762986786,2.42581237860458,2.30840754118072,1.61464426695906,1.86970067277283,2.02932984805332,1.31312719796049,4.08073171281791,7.6024373824309,2.9048049735635,2.47664241555867,2.40752885580625,4.52084296811258,3.2806614653046,6.17701067657611,10.8786195196067,10.7762618289217,7.04819866402561,2.86401185404534,1.89801596148681,2.84647253977588,2.59212817972323,3.55450103224597,2.18362563746178,2.69728692769641,3.38879168473877,1.57053565190418,4.92536898508813,9.94142900939081,2.81846469342095,4.48549638131936,3.64008679005615,3.30567020184881,1.93739735216597,1.18269287843545,2.34714477291508,3.3853140059427,2.72634295506848,3.14059357073808,4.03242008761012,0.948033361884535,3.24360344464263,3.08132871494482,2.98817892848929,3.22248052201467,1.98681354781265,2.76449533895928,2.95379054349154,2.3222283488074,2.51482461961499,2.92395936896837,2.92373642219257,4.04089734889384,3.74006086981021,2.49403421976732,3.10780334723691,1.88399098879899,2.68615386182526,2.51146472241848,3.19060208267009,2.56412273974171,0.857473516316263,2.50786052017682,7.90652579663893,8.74617949363636,8.02053718815155,10.1393377582776,9.59115527678899,12.0863023582352,14.1754725048679,10.8077088773813,5.89085131679466,6.73088405277366,3.94391920819871,4.78829848081237,4.09760653809922,3.40349403895612,4.82110274044359,5.69914876195044,2.66696073361938,2.47242068686673,2.56735367673452,2.77966932940177,2.02783439912192,2.26351609663291,3.183811253976,2.62503124859964,3.9056118889817,5.23923060411381,4.86714168968393,4.82273051159263,9.89006161927936,4.12156976376312,3.42869252385415,2.30718548007139,4.29185141905178,2.90692833264657,2.63506265162926,3.63842813934209,1.46342378298218,1.8414879800649,4.07412341537585,1.12228454331548,3.6776855618494,4.82671963640261,2.45538625901814,3.87342102964915,4.82266527452853,2.49810577937946,3.04111090979031,3.00819475667618,2.67803664896381,3.08827986767322,3.2461496986859
|short_description=p2@Cmas
}}

Revision as of 09:18, 14 September 2013

Short description:p2@Cmas
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cmas_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000144920_5end
EntrezGene:Cmas
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Cmas

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B97.79
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.10
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G34.87
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.05
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.61e-0923
neuroblast (sensu Vertebrata)2.61e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.27e-1254
neural tube1.65e-1152
neural rod1.65e-1152
future spinal cord1.65e-1152
neural keel1.65e-1152
gray matter9.66e-1134
anterior neural tube6.46e-1040
regional part of forebrain1.41e-0939
forebrain1.41e-0939
future forebrain1.41e-0939
brain3.21e-0947
future brain3.21e-0947
regional part of brain4.82e-0946
brain grey matter1.30e-0829
regional part of telencephalon1.30e-0829
telencephalon1.30e-0829
mucosa1.83e-0715
central nervous system5.46e-0773
intestinal mucosa9.64e-0713
wall of intestine9.64e-0713
gastrointestinal system mucosa9.64e-0713







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