FFCP PHASE1:Mm9::chr7:108011867..108011882,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320100|HGNC=|UniProt=D3YTN8|association_with_transcript=29bp_to_ENSMUST00000142885_5end|description=CAGE_peak_2_at_Relt_5end|id=chr7:108011867..108011882,-|ontology_enrichment_celltype=CL:0000988!4.97e-11!32;CL:0002032!4.97e-11!32;CL:0000037!4.97e-11!32;CL:0000566!4.97e-11!32;CL:0000837!4.97e-11!32;CL:0002031!3.58e-10!25;CL:0000063!1.22e-09!66;CL:0000219!1.30e-09!54;CL:0002320!4.51e-09!46;CL:0000134!4.51e-09!46;CL:0000838!6.14e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,1.90e-13,32;CL:0002032,1.90e-13,32;CL:0000037,1.90e-13,32;CL:0000837,1.90e-13,32;CL:0002031,7.61e-13,25;CL:0000219,1.52e-12,54;CL:0002320,1.23e-11,46;CL:0000134,1.23e-11,46;CL:0000838,5.38e-08,12;CL:0000738,9.80e-08,17;CL:0002087,9.80e-08,17;CL:0000049,1.03e-07,19;CL:0000084,1.59e-07,11;CL:0000827,1.59e-07,11;CL:0000763,4.61e-07,16;CL:0000542,5.51e-07,13;CL:0000051,5.51e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.55e-13!48;UBERON:0002405!4.89e-13!70;UBERON:0002390!4.29e-12!45;UBERON:0003061!4.29e-12!45;UBERON:0002384!4.51e-09!46;UBERON:0004177!4.26e-07!29;UBERON:0005057!4.50e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.41e-16,48;UBERON:0002405,2.41e-16,48;UBERON:0002390,7.38e-15,45;UBERON:0003061,7.38e-15,45;UBERON:0002384,1.23e-11,46;UBERON:0004177,1.93e-08,29;UBERON:0005057,1.93e-08,29;UBERON:0000077,6.65e-08,35;UBERON:0002204,7.17e-08,32;UBERON:0001474,9.85e-08,22;UBERON:0004765,9.85e-08,22;UBERON:0001434,9.85e-08,22;UBERON:0002371,1.59e-07,16;UBERON:0003929,4.43e-07,55;UBERON:0000490,9.11e-07,66|phase1_expression=0.160148847104794,6.2815573375085,5.45999087267443,0,0.500895729946347,5.03637815735669,7.47560449905682,4.39019299701359,13.3749286044083,17.5548394741495,2.39705155515707,2.95156988282745,2.56801094896809,3.75907730401689,11.9919514253639,12.755941845559,13.2916756844348,5.67831897644828,3.42786084014347,5.09267582157636,1.02051948181284,14.0993150705257,14.1047886135025,3.03985603307473,2.75291137280604,6.89078356938024,4.73838195774982,5.60225204983311,0,0,3.32595765982957,10.7955214488137,6.1506478758457,0,1.73310971850765,0.332469290716985,2.04169356262369,15.0671387065287,19.533383613095,8.89990364755457,21.7645650571475,13.6609096991689,12.1377588257788,0.503587271902309,0.101376931219515,2.0190142737785,7.04152209913235,1.30815093828268,1.75748946187577,2.52758868796568,0.419959264876088,0,3.85899993932794,2.90144856804538,10.4189077734164,1.02903774414379,0,0,0,0,0,1.69422266034566,1.77858959222228,4.04954872776629,2.96659908770092,1.4209602298922,6.5912024314049,5.76327457982332,0.207379224616955,0.405017814995072,0.420649922702764,0.856952953211411,1.76694832761291,0.122490799214954,0.191690942036473,0.919218786610021,1.10115880999389,1.27687338085188,1.53606533256243,0.131886287730194,0.274462930807229,0,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.142371680799103,0.372798891650601,4.92220256665696,2.56943304363071,3.76823835312181,0,2.719885334831,0,0,0,2.52799956237153,0.852151612890289,0.779358013808606,1.41335829804136,0.563373679106722,0,5.09610479413291,0,1.08245520505607,1.26679932737549,2.52762222507392,0.91347103775248,5.69663344023778,0.29688427812965,0.693941307064543,1.52232739156071,0.461230994512117,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.86759614151947,2.65383165584962,2.75003644910596,5.52103796150984,3.87900202508178,0,1.46390398505774,0,1.02182822083437,1.55759661857696,3.59941638596045,1.52484272487678,1.49790639404823,2.28750301409313,0,0.869121600961382,0,0.83115217823824,0.648965052271031,0.407357455401265,2.73695335342205,0.505445516867349,0.631325567659422,0,0.229902104433473,0,0.753524089178575,0.476255494059295,0.12811372028485,0.374806898238915,0,0.431135985865684,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,0.59710280045548,3.51106593656617,1.54408744268829,2.27330799516474,0.207125772535502,0.234526059981096,0.36012412292203,0.473489471170421,0.590292695242212,0,0,0.268273401399619,0,0.658239399653922,0.32833492815819,0.324275238183423,0.438599962275997,1.75640092232841,0.268412837520744,1.68231958851302,0,0.991256348951394,0,0.639864751605702,0.464473343720877,0.644337306610467,0.403367049246685,0.667134131534611,0.380451252225118,1.42358718463353,0.494096864172033,0.251335208800269,0,0.974820435595601,0.898819408654221,0,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.193952487167626,0.420814919341911,0.442655759869801,0.295220295959204,0.156998727841375,0.123397163921801,0,5.6727335943472,4.52085688760367,6.2961391467759,8.11440485554012,8.44120059133459,9.42115651591253,5.4662266115654,2.10775794807546,4.94210543738547,2.87536413054709,1.11642284300551,0.936113019343682,0.757736633841335,0.538192240565737,0,1.66277871149944,1.70542270593436,0.977789858652155,0.339490171550376,0.469380496577004,1.00503754465089,0.476087281772027,1.75620283072019,0.78817572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| ||
|EntrezGene=320100 | |||
|HGNC= | |||
|UniProt=D3YTN8 | |||
|association_with_transcript=29bp_to_ENSMUST00000142885_5end | |||
|description=CAGE_peak_2_at_Relt_5end | |||
|id=chr7:108011867..108011882,- | |||
|ontology_enrichment_celltype=CL:0000988!4.97e-11!32;CL:0002032!4.97e-11!32;CL:0000037!4.97e-11!32;CL:0000566!4.97e-11!32;CL:0000837!4.97e-11!32;CL:0002031!3.58e-10!25;CL:0000063!1.22e-09!66;CL:0000219!1.30e-09!54;CL:0002320!4.51e-09!46;CL:0000134!4.51e-09!46;CL:0000838!6.14e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.90e-13,32;CL:0002032,1.90e-13,32;CL:0000037,1.90e-13,32;CL:0000837,1.90e-13,32;CL:0002031,7.61e-13,25;CL:0000219,1.52e-12,54;CL:0002320,1.23e-11,46;CL:0000134,1.23e-11,46;CL:0000838,5.38e-08,12;CL:0000738,9.80e-08,17;CL:0002087,9.80e-08,17;CL:0000049,1.03e-07,19;CL:0000084,1.59e-07,11;CL:0000827,1.59e-07,11;CL:0000763,4.61e-07,16;CL:0000542,5.51e-07,13;CL:0000051,5.51e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.55e-13!48;UBERON:0002405!4.89e-13!70;UBERON:0002390!4.29e-12!45;UBERON:0003061!4.29e-12!45;UBERON:0002384!4.51e-09!46;UBERON:0004177!4.26e-07!29;UBERON:0005057!4.50e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.41e-16,48;UBERON:0002405,2.41e-16,48;UBERON:0002390,7.38e-15,45;UBERON:0003061,7.38e-15,45;UBERON:0002384,1.23e-11,46;UBERON:0004177,1.93e-08,29;UBERON:0005057,1.93e-08,29;UBERON:0000077,6.65e-08,35;UBERON:0002204,7.17e-08,32;UBERON:0001474,9.85e-08,22;UBERON:0004765,9.85e-08,22;UBERON:0001434,9.85e-08,22;UBERON:0002371,1.59e-07,16;UBERON:0003929,4.43e-07,55;UBERON:0000490,9.11e-07,66 | |||
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| |||
|short_description=p2@Relt | |||
}} |
Revision as of 11:17, 14 September 2013
Short description: | p2@Relt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Relt_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENSMUST00000142885_5end |
EntrezGene: | Relt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.90e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.90e-13 | 32 |
hematopoietic stem cell | 1.90e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.90e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 7.61e-13 | 25 |
motile cell | 1.52e-12 | 54 |
connective tissue cell | 1.23e-11 | 46 |
mesenchymal cell | 1.23e-11 | 46 |
lymphoid lineage restricted progenitor cell | 5.38e-08 | 12 |
leukocyte | 9.80e-08 | 17 |
nongranular leukocyte | 9.80e-08 | 17 |
common myeloid progenitor | 1.03e-07 | 19 |
T cell | 1.59e-07 | 11 |
pro-T cell | 1.59e-07 | 11 |
myeloid cell | 4.61e-07 | 16 |
lymphocyte | 5.51e-07 | 13 |
common lymphoid progenitor | 5.51e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.41e-16 | 48 |
immune system | 2.41e-16 | 48 |
hematopoietic system | 7.38e-15 | 45 |
blood island | 7.38e-15 | 45 |
connective tissue | 1.23e-11 | 46 |
hemopoietic organ | 1.93e-08 | 29 |
immune organ | 1.93e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 6.65e-08 | 35 |
musculoskeletal system | 7.17e-08 | 32 |
bone element | 9.85e-08 | 22 |
skeletal element | 9.85e-08 | 22 |
skeletal system | 9.85e-08 | 22 |
bone marrow | 1.59e-07 | 16 |
gut epithelium | 4.43e-07 | 55 |
unilaminar epithelium | 9.11e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.