FFCP PHASE1:Mm9::chr7:133967218..133967320,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68952|HGNC=|MCL_coexpression_id=2369|UniProt=Q7TNV1|association_with_transcript=401bp_to_ENSMUST00000079423,NM_029978,uc009jsy.2_5end|description=CAGE_peak_2_at_Fam57b_5end|id=chr7:133967218..133967320,+|ontology_enrichment_celltype=CL:0000117!2.10e-15!23;CL:0000337!2.10e-15!23;CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0002319!8.70e-11!43;CL:0000221!9.86e-11!44;CL:0000133!9.86e-11!44;CL:0000393!5.01e-10!39;CL:0000211!5.01e-10!39;CL:0000055!2.55e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.06e-20,23;CL:0000337,9.06e-20,23;CL:0000540,2.60e-16,33;CL:0000047,2.60e-16,33;CL:0000031,2.60e-16,33;CL:0000404,2.60e-16,33;CL:0000393,4.12e-12,39;CL:0000211,4.12e-12,39;CL:0002319,1.03e-10,43;CL:0000221,3.10e-10,44;CL:0000133,3.10e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.16e-29!71;UBERON:0003075!6.16e-29!71;UBERON:0007284!6.16e-29!71;UBERON:0004121!5.71e-28!102;UBERON:0000924!5.71e-28!102;UBERON:0006601!5.71e-28!102;UBERON:0000073!9.36e-27!75;UBERON:0001016!9.36e-27!75;UBERON:0001017!1.70e-26!73;UBERON:0005743!1.70e-26!73;UBERON:0000033!1.34e-24!63;UBERON:0001049!4.62e-23!52;UBERON:0005068!4.62e-23!52;UBERON:0006241!4.62e-23!52;UBERON:0007135!4.62e-23!52;UBERON:0003056!3.32e-21!49;UBERON:0000955!4.85e-21!50;UBERON:0006238!4.85e-21!50;UBERON:0002616!1.95e-20!49;UBERON:0002020!4.06e-17!34;UBERON:0003080!4.82e-17!40;UBERON:0002780!1.86e-16!39;UBERON:0001890!1.86e-16!39;UBERON:0006240!1.86e-16!39;UBERON:0002791!1.20e-13!29;UBERON:0003528!1.20e-13!29;UBERON:0001893!1.20e-13!29;UBERON:0007811!1.50e-12!86;UBERON:0000153!8.44e-10!94;UBERON:0000956!3.25e-09!21;UBERON:0001869!3.25e-09!21;UBERON:0000203!3.25e-09!21;UBERON:0002619!3.78e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.24e-34,64;UBERON:0003075,1.24e-34,64;UBERON:0007284,1.24e-34,64;UBERON:0000073,1.34e-31,54;UBERON:0001017,3.61e-31,73;UBERON:0001016,1.08e-30,75;UBERON:0001049,3.24e-30,52;UBERON:0005068,3.24e-30,52;UBERON:0006241,3.24e-30,52;UBERON:0007135,3.24e-30,52;UBERON:0004121,9.31e-29,95;UBERON:0000924,9.31e-29,95;UBERON:0006601,9.31e-29,95;UBERON:0010371,1.58e-28,73;UBERON:0003056,3.29e-27,49;UBERON:0000955,3.26e-25,47;UBERON:0006238,3.26e-25,47;UBERON:0002616,1.99e-24,46;UBERON:0002020,8.79e-23,34;UBERON:0010314,9.55e-23,92;UBERON:0003080,1.25e-22,40;UBERON:0002780,7.49e-22,39;UBERON:0001890,7.49e-22,39;UBERON:0006240,7.49e-22,39;UBERON:0003528,3.59e-18,29;UBERON:0002791,3.59e-18,29;UBERON:0001893,3.59e-18,29;UBERON:0000956,2.70e-12,21;UBERON:0001869,2.70e-12,21;UBERON:0000203,2.70e-12,21;UBERON:0002619,1.49e-09,17;UBERON:0003076,6.21e-08,12;UBERON:0003057,6.21e-08,12;UBERON:0002021,6.93e-08,10;UBERON:0000411,6.93e-08,10;UBERON:0001950,6.93e-08,10;UBERON:0002420,3.56e-07,8;UBERON:0007245,3.56e-07,8;UBERON:0010009,3.56e-07,8;UBERON:0010011,3.56e-07,8;UBERON:0000454,3.56e-07,8;UBERON:0002240,7.06e-07,6;UBERON:0005174,7.06e-07,6;UBERON:0001137,7.06e-07,6|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,53.0069127452146,57.6600167406516,51.9741750875067,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,16.5903379693564,20.3858966880853,13.0401476037857,41.4193927385515,40.1980744531937,27.4379390241497,34.887751450638,29.4150011715207,9.91042928994498,18.8977260366078,19.5080297235429,70.5591639356537,89.6578907303615,66.1559980607085,18.9844439320939,1.68828783009504,10.6958773443767,44.1942878210502,50.1148316412842,51.6326464936083,0.832988126665025,1.81371744256285,1.15945795480671,0,0,0.539703191637817,0,0,3.23022166303029,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,1.33597925158342,3.99016251562112,4.56698217468212,1.61430848079241,3.91878865436819,3.99801604261396,0.251333182659351,0.247194967734374,0.86759614151947,0.884610551949874,0.485300549842228,1.76673214768315,0.969750506270444,0,29.8636412951778,57.3883976668867,0,0,0,0,17.3757141709594,12.3525162761029,32.9214402535705,11.1247564923057,12.7857728665165,17.8697718321222,12.3303359931496,0,0.124406970610093,0.252722758433675,48.1911849980025,0.780722657776222,4.13823787980251,8.82304436046211,10.3986324306643,9.72921937863988,10.6334387836425,12.1812241927647,180.057546034355,0,0.189106080167819,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.730999937126662,0.658650345873152,0.268412837520744,9.04246778825747,18.6257348406505,0,0.264450566663544,0.639864751605702,1.16118335930219,0.902072229254653,1.00841762311671,0.444756087689741,0.570676878337677,0,0.494096864172033,0.754005626400808,0.596869416123452,0.58489226135736,0,0,0,0.189667900953082,0.685491075658373,0,0.203651327845314,0.58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| ||
|EntrezGene=68952 | |||
|HGNC= | |||
|MCL_coexpression_id=2369 | |||
|UniProt=Q7TNV1 | |||
|association_with_transcript=401bp_to_ENSMUST00000079423,NM_029978,uc009jsy.2_5end | |||
|description=CAGE_peak_2_at_Fam57b_5end | |||
|id=chr7:133967218..133967320,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.10e-15!23;CL:0000337!2.10e-15!23;CL:0000540!2.19e-14!33;CL:0000047!2.19e-14!33;CL:0000031!2.19e-14!33;CL:0000404!2.19e-14!33;CL:0002319!8.70e-11!43;CL:0000221!9.86e-11!44;CL:0000133!9.86e-11!44;CL:0000393!5.01e-10!39;CL:0000211!5.01e-10!39;CL:0000055!2.55e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.06e-20,23;CL:0000337,9.06e-20,23;CL:0000540,2.60e-16,33;CL:0000047,2.60e-16,33;CL:0000031,2.60e-16,33;CL:0000404,2.60e-16,33;CL:0000393,4.12e-12,39;CL:0000211,4.12e-12,39;CL:0002319,1.03e-10,43;CL:0000221,3.10e-10,44;CL:0000133,3.10e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.16e-29!71;UBERON:0003075!6.16e-29!71;UBERON:0007284!6.16e-29!71;UBERON:0004121!5.71e-28!102;UBERON:0000924!5.71e-28!102;UBERON:0006601!5.71e-28!102;UBERON:0000073!9.36e-27!75;UBERON:0001016!9.36e-27!75;UBERON:0001017!1.70e-26!73;UBERON:0005743!1.70e-26!73;UBERON:0000033!1.34e-24!63;UBERON:0001049!4.62e-23!52;UBERON:0005068!4.62e-23!52;UBERON:0006241!4.62e-23!52;UBERON:0007135!4.62e-23!52;UBERON:0003056!3.32e-21!49;UBERON:0000955!4.85e-21!50;UBERON:0006238!4.85e-21!50;UBERON:0002616!1.95e-20!49;UBERON:0002020!4.06e-17!34;UBERON:0003080!4.82e-17!40;UBERON:0002780!1.86e-16!39;UBERON:0001890!1.86e-16!39;UBERON:0006240!1.86e-16!39;UBERON:0002791!1.20e-13!29;UBERON:0003528!1.20e-13!29;UBERON:0001893!1.20e-13!29;UBERON:0007811!1.50e-12!86;UBERON:0000153!8.44e-10!94;UBERON:0000956!3.25e-09!21;UBERON:0001869!3.25e-09!21;UBERON:0000203!3.25e-09!21;UBERON:0002619!3.78e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.24e-34,64;UBERON:0003075,1.24e-34,64;UBERON:0007284,1.24e-34,64;UBERON:0000073,1.34e-31,54;UBERON:0001017,3.61e-31,73;UBERON:0001016,1.08e-30,75;UBERON:0001049,3.24e-30,52;UBERON:0005068,3.24e-30,52;UBERON:0006241,3.24e-30,52;UBERON:0007135,3.24e-30,52;UBERON:0004121,9.31e-29,95;UBERON:0000924,9.31e-29,95;UBERON:0006601,9.31e-29,95;UBERON:0010371,1.58e-28,73;UBERON:0003056,3.29e-27,49;UBERON:0000955,3.26e-25,47;UBERON:0006238,3.26e-25,47;UBERON:0002616,1.99e-24,46;UBERON:0002020,8.79e-23,34;UBERON:0010314,9.55e-23,92;UBERON:0003080,1.25e-22,40;UBERON:0002780,7.49e-22,39;UBERON:0001890,7.49e-22,39;UBERON:0006240,7.49e-22,39;UBERON:0003528,3.59e-18,29;UBERON:0002791,3.59e-18,29;UBERON:0001893,3.59e-18,29;UBERON:0000956,2.70e-12,21;UBERON:0001869,2.70e-12,21;UBERON:0000203,2.70e-12,21;UBERON:0002619,1.49e-09,17;UBERON:0003076,6.21e-08,12;UBERON:0003057,6.21e-08,12;UBERON:0002021,6.93e-08,10;UBERON:0000411,6.93e-08,10;UBERON:0001950,6.93e-08,10;UBERON:0002420,3.56e-07,8;UBERON:0007245,3.56e-07,8;UBERON:0010009,3.56e-07,8;UBERON:0010011,3.56e-07,8;UBERON:0000454,3.56e-07,8;UBERON:0002240,7.06e-07,6;UBERON:0005174,7.06e-07,6;UBERON:0001137,7.06e-07,6 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,53.0069127452146,57.6600167406516,51.9741750875067,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,16.5903379693564,20.3858966880853,13.0401476037857,41.4193927385515,40.1980744531937,27.4379390241497,34.887751450638,29.4150011715207,9.91042928994498,18.8977260366078,19.5080297235429,70.5591639356537,89.6578907303615,66.1559980607085,18.9844439320939,1.68828783009504,10.6958773443767,44.1942878210502,50.1148316412842,51.6326464936083,0.832988126665025,1.81371744256285,1.15945795480671,0,0,0.539703191637817,0,0,3.23022166303029,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,1.33597925158342,3.99016251562112,4.56698217468212,1.61430848079241,3.91878865436819,3.99801604261396,0.251333182659351,0.247194967734374,0.86759614151947,0.884610551949874,0.485300549842228,1.76673214768315,0.969750506270444,0,29.8636412951778,57.3883976668867,0,0,0,0,17.3757141709594,12.3525162761029,32.9214402535705,11.1247564923057,12.7857728665165,17.8697718321222,12.3303359931496,0,0.124406970610093,0.252722758433675,48.1911849980025,0.780722657776222,4.13823787980251,8.82304436046211,10.3986324306643,9.72921937863988,10.6334387836425,12.1812241927647,180.057546034355,0,0.189106080167819,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.730999937126662,0.658650345873152,0.268412837520744,9.04246778825747,18.6257348406505,0,0.264450566663544,0.639864751605702,1.16118335930219,0.902072229254653,1.00841762311671,0.444756087689741,0.570676878337677,0,0.494096864172033,0.754005626400808,0.596869416123452,0.58489226135736,0,0,0,0.189667900953082,0.685491075658373,0,0.203651327845314,0.581857461502877,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,40.9404004468869,32.5848488726325,0,4.54447668967871,0.94652465824877,2.34263246577983,1.50796378412959,0,1.55959071857676,0.849229592366497,0.404810701674894,4.38383786866968,1.58115111178609,16.708708453934,0,0,0,0.329940245945071,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,5.10659408630682,1.44048875225048,1.4229455216103,1.92903331528433,5.32020700926821,6.42127743367454,6.08831376227848,7.00269382963578,0,0,0,0.49465875882444,0,0.241251699712623,0,0,0.874442509889552,54.7004640931004,0,0.412773735926445,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,0.609958401380546,0.648032044930808,1.04544148007234,0.87345025498471,0,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0.258319646955462,0.337912250981556,0.469428954583016,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0.608175645870493,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0.221985953374065,0.717710852875806,0.167884616364078,0,0,0,0,0.501572104035363,19.7663144915973,15.1907328047368,18.3326564300607,34.7143428334249,8.22099023724771,11.3309084608455,10.1253375034771,8.55610286126019,14.5005570874945,10.8729665467882,6.2272408550506,11.5717213286299,8.36594668195257,11.9122291363464,9.22297915563122,6.43452279575049,6.66740183404846,7.82933217507798,6.73930340142812,6.82282471762253,6.84394109703647,6.22466926574051,9.92599979180754,7.74704344098918,7.3517400263185,8.09699275181225,6.02598494913249,5.98018583437486,5.35711671044299,5.00476328456951,6.51451579532289,7.63145966485151,6.91464950847231,5.95920308192547,6.39943786824248,7.69992931814256,6.76833499629258,7.3659519202596,5.43216455383447,4.48913817326191,5.33857581558784,5.71325997778268,2.86461730218783,8.83139994760006,4.24394544158511,15.7380664100906,5.14649538579898,3.65280791882107,4.3996316375834,2.42650561031467,3.01428186306548 | |||
|short_description=p2@Fam57b | |||
}} |
Revision as of 11:50, 14 September 2013
Short description: | p2@Fam57b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam57b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2369 |
Association with transcript: | 401bp_to_ENSMUST00000079423, NM_029978, uc009jsy.2_5end |
EntrezGene: | Fam57b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.06e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.06e-20 | 23 |
neuron | 2.60e-16 | 33 |
neuronal stem cell | 2.60e-16 | 33 |
neuroblast | 2.60e-16 | 33 |
electrically signaling cell | 2.60e-16 | 33 |
electrically responsive cell | 4.12e-12 | 39 |
electrically active cell | 4.12e-12 | 39 |
neural cell | 1.03e-10 | 43 |
ectodermal cell | 3.10e-10 | 44 |
neurectodermal cell | 3.10e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.