FFCP PHASE1:Hg19::chrX:48328551..48328585,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18070|TSSclassifier=S|UniProt=Q8WUX1|association_with_transcript=0bp_to_ENST00000376876_5end|coexpression_cluster_id=C14|description=CAGE_peak_8_at_SLC38A5_5end|id=chrX:48328551..48328585,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;4.68e-07;2!CL:0000558;4.68e-07;2|ontology_enrichment_celltype_v019_2=CL:0000764,4.68e-07,2;CL:0000765,4.68e-07,2;CL:0000050,4.68e-07,2;CL:0000038,4.68e-07,2;CL:0000558,4.68e-07,2;CL:0000547,4.68e-07,2;CL:0000549,4.68e-07,2;CL:0000550,4.68e-07,2;CL:0000552,4.68e-07,2|ontology_enrichment_development_v019=UBERON:0006601;2.10e-10;82!UBERON:0006241;1.34e-08;3!UBERON:0003057;1.34e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.59e-48!115;UBERON:0001049!4.31e-46!57;UBERON:0005068!4.31e-46!57;UBERON:0006241!4.31e-46!57;UBERON:0007135!4.31e-46!57;UBERON:0001017!8.16e-40!82;UBERON:0000955!2.00e-39!69;UBERON:0006238!2.00e-39!69;UBERON:0005743!7.49e-39!86;UBERON:0002616!3.37e-37!59;UBERON:0000073!5.85e-37!94;UBERON:0001016!5.85e-37!94;UBERON:0002780!8.82e-34!41;UBERON:0001890!8.82e-34!41;UBERON:0006240!8.82e-34!41;UBERON:0002346!8.14e-33!90;UBERON:0003080!9.45e-33!42;UBERON:0003075!6.61e-32!86;UBERON:0007284!6.61e-32!86;UBERON:0001893!2.10e-29!34;UBERON:0002020!2.98e-29!34;UBERON:0003528!2.98e-29!34;UBERON:0002791!5.96e-28!33;UBERON:0001869!1.16e-26!32;UBERON:0002619!2.14e-23!22;UBERON:0001950!2.93e-23!20;UBERON:0003056!1.61e-22!61;UBERON:0000153!1.52e-20!129;UBERON:0007811!1.52e-20!129;UBERON:0000956!5.21e-20!25;UBERON:0000203!5.21e-20!25;UBERON:0000033!3.47e-18!123;UBERON:0000924!1.89e-17!173;UBERON:0006601!1.89e-17!173;UBERON:0004121!1.42e-16!169;UBERON:0003076!3.81e-14!15;UBERON:0003057!3.81e-14!15;UBERON:0004732!2.47e-11!13;UBERON:0002308!7.73e-11!9;UBERON:0000125!7.73e-11!9;UBERON:0000025!1.13e-10!194;UBERON:0002298!3.37e-10!8;UBERON:0004733!4.67e-10!12;UBERON:0002028!4.67e-10!12;UBERON:0007277!4.67e-10!12;UBERON:0000178!9.40e-10!15;UBERON:0000179!9.40e-10!15;UBERON:0000463!9.40e-10!15;UBERON:0001872!4.41e-09!5;UBERON:0002021!7.46e-09!5;UBERON:0000064!1.25e-08!219;UBERON:0002420!3.58e-08!9;UBERON:0007245!3.58e-08!9;UBERON:0010009!3.58e-08!9;UBERON:0010011!3.58e-08!9;UBERON:0000454!3.58e-08!9;UBERON:0009663!5.11e-08!7;UBERON:0001871!1.74e-07!7;UBERON:0000200!3.04e-07!6;UBERON:0000922!8.83e-07!612|ontology_enrichment_uberon_v019=UBERON:0002619;6.95e-33;22!UBERON:0001950;2.44e-32;20!UBERON:0001893;1.58e-31;34!UBERON:0003528;5.34e-30;34!UBERON:0002020;5.34e-30;34!UBERON:0001869;1.46e-29;32!UBERON:0002791;9.50e-29;32!UBERON:0002780;1.55e-28;41!UBERON:0001890;1.55e-28;41!UBERON:0000956;1.56e-28;25!UBERON:0000203;1.56e-28;25!UBERON:0000073;4.22e-28;53!UBERON:0002616;4.22e-28;53!UBERON:0000955;5.80e-22;68!UBERON:0001017;1.05e-18;75!UBERON:0001016;6.00e-18;83!UBERON:0002298;1.25e-15;6!UBERON:0000178;2.10e-15;15!UBERON:0000179;2.10e-15;15!UBERON:0000463;2.10e-15;15!UBERON:0001872;2.40e-13;5!UBERON:0004732;8.31e-12;13!UBERON:0007023;2.49e-11;114!UBERON:0000200;1.20e-10;6!UBERON:0004733;4.97e-10;12!UBERON:0002028;4.97e-10;12!UBERON:0000125;9.46e-10;9!UBERON:0002308;9.46e-10;9!UBERON:0001871;3.49e-09;6!UBERON:0011216;5.92e-09;132!UBERON:0002021;7.25e-09;5!UBERON:0000988;8.73e-09;3!UBERON:0002240;1.34e-08;3!UBERON:0005174;1.34e-08;3!UBERON:0001137;1.34e-08;3!UBERON:0001896;1.56e-08;3!UBERON:0005290;1.56e-08;3!UBERON:0000922;3.41e-07;49!UBERON:0002390;4.12e-07;32!UBERON:0002420;6.94e-07;9!UBERON:0007245;6.94e-07;9!UBERON:0010009;6.94e-07;9!UBERON:0010011;6.94e-07;9!UBERON:0000454;6.94e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.37e-53,56;UBERON:0005068,1.37e-53,56;UBERON:0006241,1.37e-53,56;UBERON:0007135,1.37e-53,56;UBERON:0000955,1.52e-47,68;UBERON:0006238,1.52e-47,68;UBERON:0000073,2.18e-47,53;UBERON:0002616,2.18e-47,53;UBERON:0001017,1.40e-45,81;UBERON:0001016,3.35e-42,89;UBERON:0007023,5.16e-39,114;UBERON:0002780,1.88e-38,41;UBERON:0001890,1.88e-38,41;UBERON:0003080,1.88e-38,41;UBERON:0006240,1.88e-38,41;UBERON:0003075,6.81e-38,82;UBERON:0007284,6.81e-38,82;UBERON:0001893,4.82e-37,34;UBERON:0003528,7.92e-37,34;UBERON:0002020,7.92e-37,34;UBERON:0002346,1.14e-35,86;UBERON:0001869,5.77e-33,32;UBERON:0002619,6.38e-33,22;UBERON:0002791,1.02e-32,32;UBERON:0001950,2.30e-32,20;UBERON:0000956,1.45e-28,25;UBERON:0000203,1.45e-28,25;UBERON:0010371,9.02e-28,104;UBERON:0003056,9.49e-28,61;UBERON:0011216,5.40e-25,223;UBERON:0010314,8.75e-20,132;UBERON:0004121,1.85e-19,171;UBERON:0000924,1.85e-19,171;UBERON:0006601,1.85e-19,171;UBERON:0003076,9.11e-16,15;UBERON:0003057,9.11e-16,15;UBERON:0002298,1.41e-15,6;UBERON:0000178,2.10e-15,15;UBERON:0000179,2.10e-15,15;UBERON:0000463,2.10e-15,15;UBERON:0000025,1.44e-13,192;UBERON:0001872,2.75e-13,5;UBERON:0004732,9.35e-12,13;UBERON:0000200,1.16e-10,6;UBERON:0004733,5.77e-10,12;UBERON:0002028,5.77e-10,12;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |||
|TSSclassifier=S | |||
|UniProt=Q8WUX1 | |||
|association_with_transcript=0bp_to_ENST00000376876_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_8_at_SLC38A5_5end | |||
|id=chrX:48328551..48328585,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.68e-07;2!CL:0000558;4.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.68e-07,2;CL:0000765,4.68e-07,2;CL:0000050,4.68e-07,2;CL:0000038,4.68e-07,2;CL:0000558,4.68e-07,2;CL:0000547,4.68e-07,2;CL:0000549,4.68e-07,2;CL:0000550,4.68e-07,2;CL:0000552,4.68e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.10e-10;82!UBERON:0006241;1.34e-08;3!UBERON:0003057;1.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@SLC38A5 | |||
}} |
Revision as of 12:04, 14 September 2013
Short description: | p8@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SLC38A5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000376876_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | Q8WUX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.68e-07 | 2 |
erythroblast | 4.68e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.68e-07 | 2 |
erythroid progenitor cell | 4.68e-07 | 2 |
reticulocyte | 4.68e-07 | 2 |
proerythroblast | 4.68e-07 | 2 |
basophilic erythroblast | 4.68e-07 | 2 |
polychromatophilic erythroblast | 4.68e-07 | 2 |
orthochromatic erythroblast | 4.68e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.