FFCP PHASE1:Mm9::chr7:148615253..148615328,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57754|HGNC=|MCL_coexpression_id=1|UniProt=Q9JKC6|association_with_transcript=0bp_to_ENSMUST00000084436,ENSMUST00000137488,NM_021316,uc009kky.1_5end|description=CAGE_peak_1_at_Cend1_5end|id=chr7:148615253..148615328,-|ontology_enrichment_celltype=CL:0000221!2.04e-16!44;CL:0000133!2.04e-16!44;CL:0002319!2.79e-16!43;CL:0000117!2.41e-13!23;CL:0000337!2.41e-13!23;CL:0000540!2.50e-13!33;CL:0000047!2.50e-13!33;CL:0000031!2.50e-13!33;CL:0000404!2.50e-13!33;CL:0000055!9.90e-13!50;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39|ontology_enrichment_celltype_v019_2=CL:0000221,4.52e-17,44;CL:0000133,4.52e-17,44;CL:0002319,6.25e-17,43;CL:0000117,7.29e-14,23;CL:0000337,7.29e-14,23;CL:0000540,7.58e-14,33;CL:0000047,7.58e-14,33;CL:0000031,7.58e-14,33;CL:0000404,7.58e-14,33;CL:0000393,3.05e-11,39;CL:0000211,3.05e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.84e-33!75;UBERON:0001016!8.84e-33!75;UBERON:0001017!1.57e-32!73;UBERON:0005743!1.57e-32!73;UBERON:0004121!3.41e-29!102;UBERON:0000924!3.41e-29!102;UBERON:0006601!3.41e-29!102;UBERON:0002346!8.46e-28!71;UBERON:0003075!8.46e-28!71;UBERON:0007284!8.46e-28!71;UBERON:0000033!7.11e-26!63;UBERON:0001049!1.60e-25!52;UBERON:0005068!1.60e-25!52;UBERON:0006241!1.60e-25!52;UBERON:0007135!1.60e-25!52;UBERON:0000955!2.14e-24!50;UBERON:0006238!2.14e-24!50;UBERON:0002616!8.40e-24!49;UBERON:0003056!1.93e-20!49;UBERON:0002020!1.42e-19!34;UBERON:0003080!1.89e-18!40;UBERON:0002780!9.37e-18!39;UBERON:0001890!9.37e-18!39;UBERON:0006240!9.37e-18!39;UBERON:0002791!1.25e-16!29;UBERON:0003528!1.25e-16!29;UBERON:0001893!1.25e-16!29;UBERON:0000956!3.83e-12!21;UBERON:0001869!3.83e-12!21;UBERON:0000203!3.83e-12!21;UBERON:0007811!9.72e-11!86;UBERON:0002619!2.59e-10!17;UBERON:0000153!1.43e-09!94;UBERON:0003076!1.22e-07!12;UBERON:0003057!1.22e-07!12;UBERON:0002021!2.23e-07!10;UBERON:0000411!2.23e-07!10;UBERON:0001950!2.23e-07!10;UBERON:0000468!7.10e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.66e-34,75;UBERON:0001017,6.67e-34,73;UBERON:0002346,2.88e-29,64;UBERON:0003075,2.88e-29,64;UBERON:0007284,2.88e-29,64;UBERON:0004121,6.60e-29,95;UBERON:0000924,6.60e-29,95;UBERON:0006601,6.60e-29,95;UBERON:0010314,2.03e-28,92;UBERON:0000073,4.14e-28,54;UBERON:0001049,1.40e-26,52;UBERON:0005068,1.40e-26,52;UBERON:0006241,1.40e-26,52;UBERON:0007135,1.40e-26,52;UBERON:0000955,4.06e-23,47;UBERON:0006238,4.06e-23,47;UBERON:0010371,6.59e-23,73;UBERON:0002616,1.64e-22,46;UBERON:0003056,2.82e-21,49;UBERON:0002020,2.27e-20,34;UBERON:0003080,3.40e-19,40;UBERON:0002780,1.81e-18,39;UBERON:0001890,1.81e-18,39;UBERON:0006240,1.81e-18,39;UBERON:0003528,2.70e-17,29;UBERON:0002791,2.70e-17,29;UBERON:0001893,2.70e-17,29;UBERON:0000956,1.31e-12,21;UBERON:0001869,1.31e-12,21;UBERON:0000203,1.31e-12,21;UBERON:0002619,1.07e-10,17;UBERON:0003076,6.56e-08,12;UBERON:0003057,6.56e-08,12;UBERON:0002021,1.23e-07,10;UBERON:0000411,1.23e-07,10;UBERON:0001950,1.23e-07,10|phase1_expression=15.2141404749554,1.04692622291808,1.36499771816861,0,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,94.0578789070832,0,0,0.47997726838022,1.14704640533585,1.72269589234506,2.58457197695445,1.50829862880122,1.33016393619462,1.00812051903972,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,10.9534788208725,51.8899872185463,45.6947260087701,34.4140921361482,18.7581804977986,30.188038516644,0,0,0,12.3484529297255,4.29800159908135,5.15672092277442,120.58061067232,175.625005118315,110.286664210075,14.2314703469035,4.4464739805557,0.449949858640699,1.97773272513395,0.7104801149461,46.1384170198343,51.1010346077668,41.5795345356995,51.1672506277108,49.005715994872,489.034485299312,465.149147244098,57.4481848318134,58.9449646762154,49.6378144769411,577.007216436797,658.228227829143,672.028582996065,98.1233980712642,112.987239848976,85.9507061418654,734.530470372633,474.971642866738,495.371919292418,336.171216025455,357.352918805748,190.127434741807,6.05809546665472,19.724177187871,0.579728977403356,0,0,1.61910957491345,1.29955283489534,0,27.5271063458234,0,0,0,16.4786801138716,0,0,0,0,0,0,15.300639882354,0.258937883647172,2.67195850316685,6.41895709034703,7.30717147949139,8.30215790121811,7.68685466818375,6.46737889246376,3.14166478324189,0.494389935468748,6.07317299063629,0,0.485300549842228,0.220841518460394,0,7.45567044872489,425.117717260766,297.833217088733,1.78819938646014,0,0,0,621.331572251205,405.345534097303,117.486819225528,493.139596385488,443.410603010793,685.492759001989,512.520150031046,1.2220723662038,0.497627882440372,0.505445516867349,25.6739064181498,3.6433724029557,8.5063778640385,20.5270827978098,18.2352829581215,25.7858331783533,24.2134931338366,22.113606996096,106.327085373735,7.97601573851516,7.37513712654495,4.22282697993477,1.7535658594206,1.39023624612799,0,0.61734640922383,1.79130840136644,0,0,0,17.3985648929822,14.540615718828,11.3439098720439,5.20838418287463,6.68998387941173,4.78228049950873,3.022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| ||
|EntrezGene=57754 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9JKC6 | |||
|association_with_transcript=0bp_to_ENSMUST00000084436,ENSMUST00000137488,NM_021316,uc009kky.1_5end | |||
|description=CAGE_peak_1_at_Cend1_5end | |||
|id=chr7:148615253..148615328,- | |||
|ontology_enrichment_celltype=CL:0000221!2.04e-16!44;CL:0000133!2.04e-16!44;CL:0002319!2.79e-16!43;CL:0000117!2.41e-13!23;CL:0000337!2.41e-13!23;CL:0000540!2.50e-13!33;CL:0000047!2.50e-13!33;CL:0000031!2.50e-13!33;CL:0000404!2.50e-13!33;CL:0000055!9.90e-13!50;CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.52e-17,44;CL:0000133,4.52e-17,44;CL:0002319,6.25e-17,43;CL:0000117,7.29e-14,23;CL:0000337,7.29e-14,23;CL:0000540,7.58e-14,33;CL:0000047,7.58e-14,33;CL:0000031,7.58e-14,33;CL:0000404,7.58e-14,33;CL:0000393,3.05e-11,39;CL:0000211,3.05e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.84e-33!75;UBERON:0001016!8.84e-33!75;UBERON:0001017!1.57e-32!73;UBERON:0005743!1.57e-32!73;UBERON:0004121!3.41e-29!102;UBERON:0000924!3.41e-29!102;UBERON:0006601!3.41e-29!102;UBERON:0002346!8.46e-28!71;UBERON:0003075!8.46e-28!71;UBERON:0007284!8.46e-28!71;UBERON:0000033!7.11e-26!63;UBERON:0001049!1.60e-25!52;UBERON:0005068!1.60e-25!52;UBERON:0006241!1.60e-25!52;UBERON:0007135!1.60e-25!52;UBERON:0000955!2.14e-24!50;UBERON:0006238!2.14e-24!50;UBERON:0002616!8.40e-24!49;UBERON:0003056!1.93e-20!49;UBERON:0002020!1.42e-19!34;UBERON:0003080!1.89e-18!40;UBERON:0002780!9.37e-18!39;UBERON:0001890!9.37e-18!39;UBERON:0006240!9.37e-18!39;UBERON:0002791!1.25e-16!29;UBERON:0003528!1.25e-16!29;UBERON:0001893!1.25e-16!29;UBERON:0000956!3.83e-12!21;UBERON:0001869!3.83e-12!21;UBERON:0000203!3.83e-12!21;UBERON:0007811!9.72e-11!86;UBERON:0002619!2.59e-10!17;UBERON:0000153!1.43e-09!94;UBERON:0003076!1.22e-07!12;UBERON:0003057!1.22e-07!12;UBERON:0002021!2.23e-07!10;UBERON:0000411!2.23e-07!10;UBERON:0001950!2.23e-07!10;UBERON:0000468!7.10e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.66e-34,75;UBERON:0001017,6.67e-34,73;UBERON:0002346,2.88e-29,64;UBERON:0003075,2.88e-29,64;UBERON:0007284,2.88e-29,64;UBERON:0004121,6.60e-29,95;UBERON:0000924,6.60e-29,95;UBERON:0006601,6.60e-29,95;UBERON:0010314,2.03e-28,92;UBERON:0000073,4.14e-28,54;UBERON:0001049,1.40e-26,52;UBERON:0005068,1.40e-26,52;UBERON:0006241,1.40e-26,52;UBERON:0007135,1.40e-26,52;UBERON:0000955,4.06e-23,47;UBERON:0006238,4.06e-23,47;UBERON:0010371,6.59e-23,73;UBERON:0002616,1.64e-22,46;UBERON:0003056,2.82e-21,49;UBERON:0002020,2.27e-20,34;UBERON:0003080,3.40e-19,40;UBERON:0002780,1.81e-18,39;UBERON:0001890,1.81e-18,39;UBERON:0006240,1.81e-18,39;UBERON:0003528,2.70e-17,29;UBERON:0002791,2.70e-17,29;UBERON:0001893,2.70e-17,29;UBERON:0000956,1.31e-12,21;UBERON:0001869,1.31e-12,21;UBERON:0000203,1.31e-12,21;UBERON:0002619,1.07e-10,17;UBERON:0003076,6.56e-08,12;UBERON:0003057,6.56e-08,12;UBERON:0002021,1.23e-07,10;UBERON:0000411,1.23e-07,10;UBERON:0001950,1.23e-07,10 | |||
|phase1_expression=15.2141404749554,1.04692622291808,1.36499771816861,0,0,0.16787927191189,0.700837921786577,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,94.0578789070832,0,0,0.47997726838022,1.14704640533585,1.72269589234506,2.58457197695445,1.50829862880122,1.33016393619462,1.00812051903972,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,10.9534788208725,51.8899872185463,45.6947260087701,34.4140921361482,18.7581804977986,30.188038516644,0,0,0,12.3484529297255,4.29800159908135,5.15672092277442,120.58061067232,175.625005118315,110.286664210075,14.2314703469035,4.4464739805557,0.449949858640699,1.97773272513395,0.7104801149461,46.1384170198343,51.1010346077668,41.5795345356995,51.1672506277108,49.005715994872,489.034485299312,465.149147244098,57.4481848318134,58.9449646762154,49.6378144769411,577.007216436797,658.228227829143,672.028582996065,98.1233980712642,112.987239848976,85.9507061418654,734.530470372633,474.971642866738,495.371919292418,336.171216025455,357.352918805748,190.127434741807,6.05809546665472,19.724177187871,0.579728977403356,0,0,1.61910957491345,1.29955283489534,0,27.5271063458234,0,0,0,16.4786801138716,0,0,0,0,0,0,15.300639882354,0.258937883647172,2.67195850316685,6.41895709034703,7.30717147949139,8.30215790121811,7.68685466818375,6.46737889246376,3.14166478324189,0.494389935468748,6.07317299063629,0,0.485300549842228,0.220841518460394,0,7.45567044872489,425.117717260766,297.833217088733,1.78819938646014,0,0,0,621.331572251205,405.345534097303,117.486819225528,493.139596385488,443.410603010793,685.492759001989,512.520150031046,1.2220723662038,0.497627882440372,0.505445516867349,25.6739064181498,3.6433724029557,8.5063778640385,20.5270827978098,18.2352829581215,25.7858331783533,24.2134931338366,22.113606996096,106.327085373735,7.97601573851516,7.37513712654495,4.22282697993477,1.7535658594206,1.39023624612799,0,0.61734640922383,1.79130840136644,0,0,0,17.3985648929822,14.540615718828,11.3439098720439,5.20838418287463,6.68998387941173,4.78228049950873,3.0229412817553,4.02410102099429,1.86824547787471,2.30383789878873,3.2833492815819,3.32382119138008,3.21639972335731,1.97595103761946,3.75777972529041,393.031913866354,67.9170441703277,0.330418782983798,3.17340679996253,2.55945900642281,1.85789337488351,2.19074684247559,3.22693639397348,2.44615848229357,3.99473814836374,1.89811624617805,3.12928013975621,3.01602250560323,2.78539060857611,3.50935356814416,1.79763881730844,1.51296634912286,3.18626037206988,3.41402221715547,2.05647322697512,7.88954149711563,2.8511185898344,1.74557238450863,1.8936671370386,1.01178459398812,2.36176236767363,1.72698600625512,1.60416313098341,0.296452627087149,0.667380422864376,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,1.29327233116623,3.60033682363921,0.814824882210129,0.339490171550376,0.938760993154008,0.502518772325447,0,0.195133647857799,0,0.221464689648775,0.956728611944923,0.983179888294428,0.518054945597687,0.578596234326046,0,0,0.491764273019036,0.551873492609465,806.606164098667,733.393523007415,0,0.757412781613119,11.6738041184015,14.4462335389756,18.5264122050207,3.58453196928828,6.46116154838943,4.24614796183249,10.1202675418724,17.2430956167674,15.0209355619679,327.426421433821,0.709700426041343,1.6025904330053,1.14020871547503,3.62934270539578,0,0.485561272309963,0.302323556964751,0.565815239267694,0.885905678642318,1.84461088766356,1.03371317267288,1.45413491791002,0.712994756769443,3.47640433729398,0,0,4.08527526904546,6.30213829109586,6.07985813778946,4.28674070063185,1.59606210278046,17.8368817602071,35.5425884500581,29.2286351150015,1.87737366450968,0.847328283455281,12.5701186891328,0.49465875882444,0,0.180938774784468,0.358117032009409,0.328281799490123,2.33184669303881,773.038084081815,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,6.68269432610579,3.16335993581135,3.86306987541013,3.13215488383224,3.13632444021703,1.9652630737156,3.37160865962052,4.71124697634415,3.14107130380836,2.72191443912765,1.24267862617385,2.81846469342095,1.94371509857172,2.31641886639937,3.30567020184881,2.19571699912143,2.19642963138012,0.821500670520278,2.0832701575032,2.30690557736564,0.966336483304024,0.576060012515731,0,1.41907650703115,0.924398614483445,0.129920822977795,0.179026695667481,0.596044064343795,0.240390899039938,0.590758108698309,0.403865799792591,0.685861259894999,0.100826185136841,0.0974578807397524,0.384847366561318,0.350630706544707,2.0405734525369,4.43971906748129,4.75483440030221,3.52557694364565,8.88672132548076,10.322536149815,2.01466786693992,1.71494703263253,4.01257683228291,585.647660793898,586.914676546651,615.289781433912,440.115999982184,439.822977692752,454.7471262286,419.188972643951,472.386942182207,480.784095932241,454.593553718098,14.8415907045373,19.1531939232495,18.7806966329548,18.7192172142586,30.3939085810574,30.3341788942523,25.3361269693841,26.7845574410562,29.524567282447,25.2697211763797,21.0387818908899,25.27592974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| |||
|short_description=p1@Cend1 | |||
}} |
Revision as of 12:18, 14 September 2013
Short description: | p1@Cend1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cend1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000084436, ENSMUST00000137488, NM_021316, uc009kky.1_5end |
EntrezGene: | Cend1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.52e-17 | 44 |
neurectodermal cell | 4.52e-17 | 44 |
neural cell | 6.25e-17 | 43 |
CNS neuron (sensu Vertebrata) | 7.29e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.29e-14 | 23 |
neuron | 7.58e-14 | 33 |
neuronal stem cell | 7.58e-14 | 33 |
neuroblast | 7.58e-14 | 33 |
electrically signaling cell | 7.58e-14 | 33 |
electrically responsive cell | 3.05e-11 | 39 |
electrically active cell | 3.05e-11 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.