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FFCP PHASE1:Mm9::chr7:52960730..52960762,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=13170|HGNC=|UniProt=Q3USN7,Q60925|association_with_transcript=113bp_to_NM_016974,uc009gws.2_5end|description=CAGE_peak_3_at_Dbp_5end|id=chr7:52960730..52960762,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.87e-09!63;UBERON:0000955!6.19e-09!50;UBERON:0006238!6.19e-09!50;UBERON:0002616!1.59e-08!49;UBERON:0004121!1.74e-08!102;UBERON:0000924!1.74e-08!102;UBERON:0006601!1.74e-08!102;UBERON:0000073!3.96e-08!75;UBERON:0001016!3.96e-08!75;UBERON:0001017!6.54e-08!73;UBERON:0005743!6.54e-08!73;UBERON:0001049!9.37e-08!52;UBERON:0005068!9.37e-08!52;UBERON:0006241!9.37e-08!52;UBERON:0007135!9.37e-08!52;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0004111!4.20e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-13,54;UBERON:0000955,5.44e-12,47;UBERON:0006238,5.44e-12,47;UBERON:0002021,5.89e-12,10;UBERON:0000411,5.89e-12,10;UBERON:0001950,5.89e-12,10;UBERON:0004121,1.05e-11,95;UBERON:0000924,1.05e-11,95;UBERON:0006601,1.05e-11,95;UBERON:0001049,1.07e-11,52;UBERON:0005068,1.07e-11,52;UBERON:0006241,1.07e-11,52;UBERON:0007135,1.07e-11,52;UBERON:0001016,1.15e-11,75;UBERON:0001017,1.36e-11,73;UBERON:0002616,2.51e-11,46;UBERON:0010314,3.47e-10,92;UBERON:0004111,4.69e-10,122;UBERON:0007023,2.05e-09,51;UBERON:0002346,2.63e-09,64;UBERON:0003075,2.63e-09,64;UBERON:0007284,2.63e-09,64;UBERON:0010371,4.31e-09,73;UBERON:0003080,6.74e-09,40;UBERON:0000025,1.22e-08,114;UBERON:0003528,1.62e-08,29;UBERON:0002791,1.62e-08,29;UBERON:0001893,1.62e-08,29;UBERON:0002619,2.69e-08,17;UBERON:0002780,3.10e-08,39;UBERON:0001890,3.10e-08,39;UBERON:0006240,3.10e-08,39;UBERON:0002020,3.65e-08,34;UBERON:0003056,1.62e-07,49;UBERON:0000956,2.48e-07,21;UBERON:0001869,2.48e-07,21;UBERON:0000203,2.48e-07,21|phase1_expression=0.320297694209588,0.697950815278722,0,0,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,1.10411757875383,0.274228867211478,0.84877930359606,2.63634199468316,0.397163804803541,0,0,0.22940928106717,0,0,0.430942465371778,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,1.4192770370732,0.367093504323363,2.34717403304412,0.65407546914134,0.878744730937887,1.55543919259427,0.839918529752175,1.43752564364972,0.503347818173209,0,0,1.28629718017973,2.86533439938757,1.03134418455488,0.202316460859598,0,0,0,0,2.2497492932035,0.988866362566974,0,5.39280198933128,11.9107674649682,0,0,0,1.71390590642282,0.883474163806454,0,0.0958454710182364,0,4.40463523997555,6.2566795661742,6.60508093001847,0,0,0,3.07101298901519,7.87867654044352,5.65353516774197,1.17851434189467,0.427115042397309,0,0.302904773332736,1.058001841495,3.76823835312181,0,0.679971333707751,1.61910957491345,0,1.79210754838934,6.88177658645584,2.55645483867087,4.1565760736459,4.24007489412408,1.12674735821344,1.28326477414318,0,0,0,0,0,2.16949371466214,0.258937883647172,5.93768556259299,0,0,0,0.150722640552623,1.17588707135705,1.25666591329675,0,38.1742302268567,0.884610551949874,1.29413479957927,1.32504911076236,0.484875253135222,3.72783522436244,4.68449275218475,2.72280718857492,1.02182822083437,0.11981512450592,0,0.127070227073065,4.04434726393021,10.5225138648284,0.251308704225729,5.73620256634512,5.11430914660661,3.1168206683934,4.05603157669394,0.81471491080253,0.497627882440372,0.758168275301024,1.05220927943237,0.260240885925407,0.459804208866946,0,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,4.39795730256327,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.583826711835847,0.658239399653922,2.13417703302824,2.59420190546738,2.92399974850665,0.878200461164203,0.402619256281115,3.78521907415429,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0.949058123089023,0.164698954724011,0.502670417600539,0,0,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.350679099451593,1.39120381673366,1.32849133181642,0.156998727841375,0.246794327843601,4.44678940630723,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,5.35784251483154,0.189491411770485,0,0.509235257325564,0,0.502518772325447,0,0,0,0.44292937929755,0.797273843287435,3.93271955317771,0.345369963731791,0.144649058581512,0,0,0.491764273019036,1.93155722413313,1.28440471990234,1.17211686592203,0.163934945376675,1.51482556322624,0.315508219416257,0,0.215423397732799,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,2.89189184779626,0.567760340833074,0.712262414669021,0.162886959353576,2.96946221350564,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,0,0.340439605753788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|EntrezGene=13170
|HGNC=
|UniProt=Q3USN7,Q60925
|association_with_transcript=113bp_to_NM_016974,uc009gws.2_5end
|description=CAGE_peak_3_at_Dbp_5end
|id=chr7:52960730..52960762,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.87e-09!63;UBERON:0000955!6.19e-09!50;UBERON:0006238!6.19e-09!50;UBERON:0002616!1.59e-08!49;UBERON:0004121!1.74e-08!102;UBERON:0000924!1.74e-08!102;UBERON:0006601!1.74e-08!102;UBERON:0000073!3.96e-08!75;UBERON:0001016!3.96e-08!75;UBERON:0001017!6.54e-08!73;UBERON:0005743!6.54e-08!73;UBERON:0001049!9.37e-08!52;UBERON:0005068!9.37e-08!52;UBERON:0006241!9.37e-08!52;UBERON:0007135!9.37e-08!52;UBERON:0002021!1.22e-07!10;UBERON:0000411!1.22e-07!10;UBERON:0001950!1.22e-07!10;UBERON:0004111!4.20e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.84e-13,54;UBERON:0000955,5.44e-12,47;UBERON:0006238,5.44e-12,47;UBERON:0002021,5.89e-12,10;UBERON:0000411,5.89e-12,10;UBERON:0001950,5.89e-12,10;UBERON:0004121,1.05e-11,95;UBERON:0000924,1.05e-11,95;UBERON:0006601,1.05e-11,95;UBERON:0001049,1.07e-11,52;UBERON:0005068,1.07e-11,52;UBERON:0006241,1.07e-11,52;UBERON:0007135,1.07e-11,52;UBERON:0001016,1.15e-11,75;UBERON:0001017,1.36e-11,73;UBERON:0002616,2.51e-11,46;UBERON:0010314,3.47e-10,92;UBERON:0004111,4.69e-10,122;UBERON:0007023,2.05e-09,51;UBERON:0002346,2.63e-09,64;UBERON:0003075,2.63e-09,64;UBERON:0007284,2.63e-09,64;UBERON:0010371,4.31e-09,73;UBERON:0003080,6.74e-09,40;UBERON:0000025,1.22e-08,114;UBERON:0003528,1.62e-08,29;UBERON:0002791,1.62e-08,29;UBERON:0001893,1.62e-08,29;UBERON:0002619,2.69e-08,17;UBERON:0002780,3.10e-08,39;UBERON:0001890,3.10e-08,39;UBERON:0006240,3.10e-08,39;UBERON:0002020,3.65e-08,34;UBERON:0003056,1.62e-07,49;UBERON:0000956,2.48e-07,21;UBERON:0001869,2.48e-07,21;UBERON:0000203,2.48e-07,21
|phase1_expression=0.320297694209588,0.697950815278722,0,0,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0.999329285446988,0.202475267389826,0,1.10411757875383,0.274228867211478,0.84877930359606,2.63634199468316,0.397163804803541,0,0,0.22940928106717,0,0,0.430942465371778,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,1.4192770370732,0.367093504323363,2.34717403304412,0.65407546914134,0.878744730937887,1.55543919259427,0.839918529752175,1.43752564364972,0.503347818173209,0,0,1.28629718017973,2.86533439938757,1.03134418455488,0.202316460859598,0,0,0,0,2.2497492932035,0.988866362566974,0,5.39280198933128,11.9107674649682,0,0,0,1.71390590642282,0.883474163806454,0,0.0958454710182364,0,4.40463523997555,6.2566795661742,6.60508093001847,0,0,0,3.07101298901519,7.87867654044352,5.65353516774197,1.17851434189467,0.427115042397309,0,0.302904773332736,1.058001841495,3.76823835312181,0,0.679971333707751,1.61910957491345,0,1.79210754838934,6.88177658645584,2.55645483867087,4.1565760736459,4.24007489412408,1.12674735821344,1.28326477414318,0,0,0,0,0,2.16949371466214,0.258937883647172,5.93768556259299,0,0,0,0.150722640552623,1.17588707135705,1.25666591329675,0,38.1742302268567,0.884610551949874,1.29413479957927,1.32504911076236,0.484875253135222,3.72783522436244,4.68449275218475,2.72280718857492,1.02182822083437,0.11981512450592,0,0.127070227073065,4.04434726393021,10.5225138648284,0.251308704225729,5.73620256634512,5.11430914660661,3.1168206683934,4.05603157669394,0.81471491080253,0.497627882440372,0.758168275301024,1.05220927943237,0.260240885925407,0.459804208866946,0,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,4.39795730256327,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.583826711835847,0.658239399653922,2.13417703302824,2.59420190546738,2.92399974850665,0.878200461164203,0.402619256281115,3.78521907415429,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0,0,0,0.190225626112559,0.949058123089023,0.164698954724011,0.502670417600539,0,0,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.350679099451593,1.39120381673366,1.32849133181642,0.156998727841375,0.246794327843601,4.44678940630723,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,5.35784251483154,0.189491411770485,0,0.509235257325564,0,0.502518772325447,0,0,0,0.44292937929755,0.797273843287435,3.93271955317771,0.345369963731791,0.144649058581512,0,0,0.491764273019036,1.93155722413313,1.28440471990234,1.17211686592203,0.163934945376675,1.51482556322624,0.315508219416257,0,0.215423397732799,0.477937595905104,0.668396022247182,0,0,0.292255857911312,0,2.89189184779626,0.567760340833074,0.712262414669021,0.162886959353576,2.96946221350564,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,0,0.340439605753788,0,0.129358683782755,1.07168517515796,0.532020700926821,0.713475270408282,0.658196082408484,1.522324745573,0,0,0,3.79238381765404,0.161464426695906,0.301564624640779,0.835606408021955,0.164140899745061,0,2.41052892613663,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0.686334519619568,0,0.139951452323658,0.138199973804424,1.90934123603023,0,0.203319467126849,0,0.209088296014469,0,0.404593039154462,0.661227645802687,0,0.259229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.469428954583016,0.13020438484395,1.04859344425711,0.966336483304024,1.72818003754719,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,15.1909357022192,0,0,0.167884616364078,0.772758376128762,0.187682475451182,1.46521299413812,1.07184189539533,1.00314420807073,2.82375921308533,3.68260189205742,5.15605962095457,4.81188910562325,5.48066015816514,13.5970901530146,7.42524750254986,9.90706647093285,14.5005570874945,10.8729665467882,0,0,0.170733605754134,0,0.209613162627982,0,0.666740183404846,0,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.187283014939765,0.512201219238954,0.459483751644906,0.476293691283074,0.347652977834566,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.564656282491984,0.169229215783353,0.182927972872773,0.263069711437843,0.543216455383447,0,0.711810108745045,0.591026894253381,0.818462086339379,0.77468420592983,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,1.14772999241306,2.20591419119516,1.39120701372253
|short_description=p3@Dbp
}}

Revision as of 13:48, 14 September 2013

Short description:p3@Dbp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dbp_5end
Coexpression cluster:NA
Association with transcript: 113bp_to_NM_016974, uc009gws.2_5end
EntrezGene:Dbp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dbp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H138.17
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.84e-1354
brain5.44e-1247
future brain5.44e-1247
occipital lobe5.89e-1210
visual cortex5.89e-1210
neocortex5.89e-1210
ectoderm-derived structure1.05e-1195
ectoderm1.05e-1195
presumptive ectoderm1.05e-1195
neural tube1.07e-1152
neural rod1.07e-1152
future spinal cord1.07e-1152
neural keel1.07e-1152
nervous system1.15e-1175
central nervous system1.36e-1173
regional part of brain2.51e-1146
structure with developmental contribution from neural crest3.47e-1092
anatomical conduit4.69e-10122
adult organism2.05e-0951
neurectoderm2.63e-0964
neural plate2.63e-0964
presumptive neural plate2.63e-0964
ecto-epithelium4.31e-0973
anterior neural tube6.74e-0940
tube1.22e-08114
brain grey matter1.62e-0829
regional part of telencephalon1.62e-0829
telencephalon1.62e-0829
regional part of cerebral cortex2.69e-0817
regional part of forebrain3.10e-0839
forebrain3.10e-0839
future forebrain3.10e-0839
gray matter3.65e-0834
pre-chordal neural plate1.62e-0749
cerebral cortex2.48e-0721
cerebral hemisphere2.48e-0721
pallium2.48e-0721







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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