FFCP PHASE1:Mm9::chr8:27834958..27834963,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=154|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:27834958..27834963,+|id=chr8:27834958..27834963,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,2.19e-19,19;CL:0000034,3.84e-14,97;CL:0000763,7.92e-13,16;CL:0000988,1.60e-12,32;CL:0002032,1.60e-12,32;CL:0000037,1.60e-12,32;CL:0000837,1.60e-12,32;CL:0000050,2.57e-11,9;CL:0000839,5.20e-10,13;CL:0002027,7.09e-10,3;CL:0002006,7.09e-10,3;CL:0002024,7.09e-10,3;CL:0000723,3.48e-09,91;CL:0000048,3.48e-09,91;CL:0002250,8.11e-09,3;CL:0000553,3.42e-08,6;CL:0000556,3.42e-08,6;CL:0002320,7.11e-08,46;CL:0000134,7.11e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,3.82e-12,6;DOID:0060100,1.28e-09,3;DOID:4045,1.28e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.46e-08,32;UBERON:0002384,7.11e-08,46;UBERON:0002371,9.40e-08,16|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0,0,0,3.33109761815663,4.45445588257617,9.09430441566591,0.157731082679119,0.137114433605739,1.69755860719212,0,0.397163804803541,4.4403964153619,0,0.45881856213434,0,0.430761996159075,0,0.570070258369122,0.252030129759931,0.665191531965914,6.35030673459631,1.23012957516914,0,1.44425809875637,2.65975432573588,1.63335485009895,5.02237956884289,3.1253413780952,3.14114246384279,1.17646297606203,4.09827290975067,4.85510353031154,0.125896817975577,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0.672187598284928,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,1.15265491596466,0.311068836925433,0,0,1.14260393761521,0,0.489963196859816,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0.604572480854284,0,0,0,0,0,0,0,0,0.259786004602869,0,0.422530259330042,0,0,0,1.5154372870785,0.760079596425296,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,4.55297473122497,2.99951365496704,4.06624726633807,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,1.60931473103431,0.180062129805349,0.90422890701429,0.204109497453984,0.2562274405697,0.655912071918102,0,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,1.40442637462647,1.54408744268829,0.852490498186778,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.464473343720877,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0.589676985339609,0.899448449539415,0.608580364165509,0.482354319504834,0.50925170356284,1.15078454980324,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0.252578877947112,0,0,0,0.568474235311454,0,0.848725428875941,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0,0.712262414669021,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.477489376012546,0,0,0,0.512612642393558,0.206386867963223,0,0.753473828018764,0.546776910884101,1.60144721244566,1.35982743995084,1.95932033253121,1.79659965945751,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.330916980914195,0,0.516639293910924,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.51968329191118,0,0.39736270956253,0.841368146639782,0.295379054349154,0.807731599585181,0.304827226619999,0.504130925684203,0.0974578807397524,0.769694733122636,0.233753804363138,0,1.10992976687032,0.0897138566094757,1.00730769818447,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.62272408550506,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0,0.282328141245992,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0,0,0,0.882365676478062,0|short_description=p@chr8:27834958..27834963,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=154 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:27834958..27834963,+ | |||
|id=chr8:27834958..27834963,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.19e-19,19;CL:0000034,3.84e-14,97;CL:0000763,7.92e-13,16;CL:0000988,1.60e-12,32;CL:0002032,1.60e-12,32;CL:0000037,1.60e-12,32;CL:0000837,1.60e-12,32;CL:0000050,2.57e-11,9;CL:0000839,5.20e-10,13;CL:0002027,7.09e-10,3;CL:0002006,7.09e-10,3;CL:0002024,7.09e-10,3;CL:0000723,3.48e-09,91;CL:0000048,3.48e-09,91;CL:0002250,8.11e-09,3;CL:0000553,3.42e-08,6;CL:0000556,3.42e-08,6;CL:0002320,7.11e-08,46;CL:0000134,7.11e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.82e-12,6;DOID:0060100,1.28e-09,3;DOID:4045,1.28e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.46e-08,32;UBERON:0002384,7.11e-08,46;UBERON:0002371,9.40e-08,16 | |||
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0.129123323441576,0.140788722151667,0.468129052643987,0.171217968225505,0,0,0,3.33109761815663,4.45445588257617,9.09430441566591,0.157731082679119,0.137114433605739,1.69755860719212,0,0.397163804803541,4.4403964153619,0,0.45881856213434,0,0.430761996159075,0,0.570070258369122,0.252030129759931,0.665191531965914,6.35030673459631,1.23012957516914,0,1.44425809875637,2.65975432573588,1.63335485009895,5.02237956884289,3.1253413780952,3.14114246384279,1.17646297606203,4.09827290975067,4.85510353031154,0.125896817975577,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0.672187598284928,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,1.15265491596466,0.311068836925433,0,0,1.14260393761521,0,0.489963196859816,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.284743361598206,0,0,0.604572480854284,0,0,0,0,0,0,0,0,0.259786004602869,0,0.422530259330042,0,0,0,1.5154372870785,0.760079596425296,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,4.55297473122497,2.99951365496704,4.06624726633807,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,1.60931473103431,0.180062129805349,0.90422890701429,0.204109497453984,0.2562274405697,0.655912071918102,0,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,1.40442637462647,1.54408744268829,0.852490498186778,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0,0.660837565967596,0.264450566663544,0.213288250535234,0.464473343720877,0.515469845288373,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0.589676985339609,0.899448449539415,0.608580364165509,0.482354319504834,0.50925170356284,1.15078454980324,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0.252578877947112,0,0,0,0.568474235311454,0,0.848725428875941,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0,0,0,0.712262414669021,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0.477489376012546,0,0,0,0.512612642393558,0.206386867963223,0,0.753473828018764,0.546776910884101,1.60144721244566,1.35982743995084,1.95932033253121,1.79659965945751,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.330916980914195,0,0.516639293910924,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.51968329191118,0,0.39736270956253,0.841368146639782,0.295379054349154,0.807731599585181,0.304827226619999,0.504130925684203,0.0974578807397524,0.769694733122636,0.233753804363138,0,1.10992976687032,0.0897138566094757,1.00730769818447,0,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.62272408550506,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0,0.282328141245992,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0,0,0,0,0,0.882365676478062,0 | |||
|short_description=p@chr8:27834958..27834963,+ | |||
}} |
Revision as of 15:27, 14 September 2013
Short description: | p@chr8:27834958..27834963, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:27834958..27834963, + |
Coexpression cluster: | MCL_coexpression_mm9:154 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.19e-19 | 19 |
stem cell | 3.84e-14 | 97 |
myeloid cell | 7.92e-13 | 16 |
hematopoietic cell | 1.60e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.60e-12 | 32 |
hematopoietic stem cell | 1.60e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.60e-12 | 32 |
megakaryocyte-erythroid progenitor cell | 2.57e-11 | 9 |
myeloid lineage restricted progenitor cell | 5.20e-10 | 13 |
CD9-positive, CD41-positive megakaryocyte cell | 7.09e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.09e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.09e-10 | 3 |
somatic stem cell | 3.48e-09 | 91 |
multi fate stem cell | 3.48e-09 | 91 |
intestinal crypt stem cell | 8.11e-09 | 3 |
megakaryocyte progenitor cell | 3.42e-08 | 6 |
megakaryocyte | 3.42e-08 | 6 |
connective tissue cell | 7.11e-08 | 46 |
mesenchymal cell | 7.11e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.46e-08 | 32 |
connective tissue | 7.11e-08 | 46 |
bone marrow | 9.40e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.82e-12 | 6 |
musculoskeletal system cancer | 1.28e-09 | 3 |
muscle cancer | 1.28e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.