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FFCP PHASE1:Mm9::chr8:73891395..73891439,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67023|HGNC=|MCL_coexpression_id=208|UniProt=|association_with_transcript=-100bp_to_ENSMUST00000127517_5end|description=CAGE_peak_4_at_Use1_5end|id=chr8:73891395..73891439,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!5.81e-18!50;UBERON:0006238!5.81e-18!50;UBERON:0002616!1.99e-17!49;UBERON:0000033!6.15e-17!63;UBERON:0001049!4.20e-16!52;UBERON:0005068!4.20e-16!52;UBERON:0006241!4.20e-16!52;UBERON:0007135!4.20e-16!52;UBERON:0001017!1.93e-14!73;UBERON:0005743!1.93e-14!73;UBERON:0000073!4.50e-13!75;UBERON:0001016!4.50e-13!75;UBERON:0003080!1.31e-12!40;UBERON:0002780!5.04e-12!39;UBERON:0001890!5.04e-12!39;UBERON:0006240!5.04e-12!39;UBERON:0002346!3.87e-11!71;UBERON:0003075!3.87e-11!71;UBERON:0007284!3.87e-11!71;UBERON:0003056!7.95e-11!49;UBERON:0002020!8.53e-10!34;UBERON:0002791!8.81e-10!29;UBERON:0003528!8.81e-10!29;UBERON:0001893!8.81e-10!29;UBERON:0007811!5.50e-09!86;UBERON:0004121!6.21e-09!102;UBERON:0000924!6.21e-09!102;UBERON:0006601!6.21e-09!102;UBERON:0000153!1.14e-07!94;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.80e-18,54;UBERON:0000955,2.39e-16,47;UBERON:0006238,2.39e-16,47;UBERON:0001049,2.54e-16,52;UBERON:0005068,2.54e-16,52;UBERON:0006241,2.54e-16,52;UBERON:0007135,2.54e-16,52;UBERON:0002616,8.39e-16,46;UBERON:0001017,2.08e-15,73;UBERON:0001016,3.60e-14,75;UBERON:0002346,2.57e-13,64;UBERON:0003075,2.57e-13,64;UBERON:0007284,2.57e-13,64;UBERON:0003080,8.65e-13,40;UBERON:0002780,3.53e-12,39;UBERON:0001890,3.53e-12,39;UBERON:0006240,3.53e-12,39;UBERON:0004121,2.55e-11,95;UBERON:0000924,2.55e-11,95;UBERON:0006601,2.55e-11,95;UBERON:0010371,4.64e-11,73;UBERON:0010314,5.14e-11,92;UBERON:0003056,7.53e-11,49;UBERON:0003528,6.40e-10,29;UBERON:0002791,6.40e-10,29;UBERON:0001893,6.40e-10,29;UBERON:0002020,7.95e-10,34;UBERON:0000956,7.39e-07,21;UBERON:0001869,7.39e-07,21;UBERON:0000203,7.39e-07,21|phase1_expression=2.08193501236232,1.04692622291808,1.81999695755814,2.11724947914781,1.50268718983904,1.34303417529512,1.40167584357315,2.1950964985068,0.422366166455,0.468129052643987,0.34243593645101,0.159544317990673,1.36960583944965,1.66098764596095,0.333109761815663,0.202475267389826,0,3.15462165358238,3.42786084014347,2.54633791078818,4.76242424845991,0.397163804803541,0.522399578277871,1.11994695955385,1.83527424853736,0,0.86152399231815,0.430942465371778,3.04037471130198,1.26015064879965,0.221730510655305,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,8.37063261473815,7.813353445238,7.85285615960697,17.0587131528994,10.9287277593351,8.73918635456076,0.629484089877886,0.608261587317087,0.367093504323363,3.12956537739216,2.39827672018491,1.97717564461025,3.4997381833371,2.09979632438044,1.43752564364972,3.02008690903925,0.725362142011344,2.68875039313971,0.771778308107841,1.71920063963254,0.515672092277442,1.41621522601718,4.23192783417626,2.53532561402472,0.677689064138264,0,0.449949858640699,2.96659908770092,4.9733608046227,1.79760066311043,3.45796474789399,1.97010263386108,2.29510095163874,2.52389953621658,3.42781181284564,1.32521124570968,1.71487118900936,1.53352753629178,0.919218786610021,12.1127469099328,7.53355294702608,7.83393319606842,2.37395317914349,2.37867873366265,3.64639359389732,10.3297709630511,10.6924895906019,10.3902808488231,2.94628585473668,2.13557521198654,0.745597783301202,0.454357159999104,0.226714680320357,0.869593466105033,0.860423876981386,0,1.07940638327563,3.89865850468601,0,3.37066608316204,0.340860645156116,1.03914401841148,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,0.253359865475099,0.505524445014783,1.94112595522402,0.776813650941515,1.33597925158342,0.867426633830679,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.753999547978053,0.741584903203122,3.47038456607788,3.5384422077995,2.26473589926373,1.10420759230197,3.39412677194655,0,4.9772735491963,4.39838084308256,1.78819938646014,0.599075622529601,1.79970819298022,1.01656181658452,7.78911324905078,4.11750542536764,1.38219787324151,4.86708096538374,3.06858548796397,8.51930982694196,4.2182728397617,0.916554274652847,1.7416975885413,3.0326731012041,3.15662783829711,1.04096354370163,1.14951052216736,0.360124259610698,1.35634336052144,0.884474488967262,1.15302348256365,1.59292931751539,2.84573707812917,0,0.189106080167819,1.40760899331159,1.53437012699302,1.39023624612799,1.74126083261083,1.23469281844766,0.398068533636986,2.1066395619397,1.54408744268829,1.42081749697796,0.621377317606506,0.703578179943289,1.2604344302271,1.42046841351126,1.18058539048442,1.85120535464854,1.86027155800326,1.87791380979733,1.28441876603886,1.48103864922132,1.47750717671186,2.67527071501324,3.94739966048397,4.83010253640311,5.77087600669599,3.78521907415429,1.85228302282712,2.31293148088659,0.793351699990633,1.2797295032114,0,0.38660238396628,0.40336704924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|EntrezGene=67023
|HGNC=
|MCL_coexpression_id=208
|UniProt=
|association_with_transcript=-100bp_to_ENSMUST00000127517_5end
|description=CAGE_peak_4_at_Use1_5end
|id=chr8:73891395..73891439,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!5.81e-18!50;UBERON:0006238!5.81e-18!50;UBERON:0002616!1.99e-17!49;UBERON:0000033!6.15e-17!63;UBERON:0001049!4.20e-16!52;UBERON:0005068!4.20e-16!52;UBERON:0006241!4.20e-16!52;UBERON:0007135!4.20e-16!52;UBERON:0001017!1.93e-14!73;UBERON:0005743!1.93e-14!73;UBERON:0000073!4.50e-13!75;UBERON:0001016!4.50e-13!75;UBERON:0003080!1.31e-12!40;UBERON:0002780!5.04e-12!39;UBERON:0001890!5.04e-12!39;UBERON:0006240!5.04e-12!39;UBERON:0002346!3.87e-11!71;UBERON:0003075!3.87e-11!71;UBERON:0007284!3.87e-11!71;UBERON:0003056!7.95e-11!49;UBERON:0002020!8.53e-10!34;UBERON:0002791!8.81e-10!29;UBERON:0003528!8.81e-10!29;UBERON:0001893!8.81e-10!29;UBERON:0007811!5.50e-09!86;UBERON:0004121!6.21e-09!102;UBERON:0000924!6.21e-09!102;UBERON:0006601!6.21e-09!102;UBERON:0000153!1.14e-07!94;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.80e-18,54;UBERON:0000955,2.39e-16,47;UBERON:0006238,2.39e-16,47;UBERON:0001049,2.54e-16,52;UBERON:0005068,2.54e-16,52;UBERON:0006241,2.54e-16,52;UBERON:0007135,2.54e-16,52;UBERON:0002616,8.39e-16,46;UBERON:0001017,2.08e-15,73;UBERON:0001016,3.60e-14,75;UBERON:0002346,2.57e-13,64;UBERON:0003075,2.57e-13,64;UBERON:0007284,2.57e-13,64;UBERON:0003080,8.65e-13,40;UBERON:0002780,3.53e-12,39;UBERON:0001890,3.53e-12,39;UBERON:0006240,3.53e-12,39;UBERON:0004121,2.55e-11,95;UBERON:0000924,2.55e-11,95;UBERON:0006601,2.55e-11,95;UBERON:0010371,4.64e-11,73;UBERON:0010314,5.14e-11,92;UBERON:0003056,7.53e-11,49;UBERON:0003528,6.40e-10,29;UBERON:0002791,6.40e-10,29;UBERON:0001893,6.40e-10,29;UBERON:0002020,7.95e-10,34;UBERON:0000956,7.39e-07,21;UBERON:0001869,7.39e-07,21;UBERON:0000203,7.39e-07,21
|phase1_expression=2.08193501236232,1.04692622291808,1.81999695755814,2.11724947914781,1.50268718983904,1.34303417529512,1.40167584357315,2.1950964985068,0.422366166455,0.468129052643987,0.34243593645101,0.159544317990673,1.36960583944965,1.66098764596095,0.333109761815663,0.202475267389826,0,3.15462165358238,3.42786084014347,2.54633791078818,4.76242424845991,0.397163804803541,0.522399578277871,1.11994695955385,1.83527424853736,0,0.86152399231815,0.430942465371778,3.04037471130198,1.26015064879965,0.221730510655305,0,0,0,2.02196133825892,1.99481574430191,2.45003227514843,8.37063261473815,7.813353445238,7.85285615960697,17.0587131528994,10.9287277593351,8.73918635456076,0.629484089877886,0.608261587317087,0.367093504323363,3.12956537739216,2.39827672018491,1.97717564461025,3.4997381833371,2.09979632438044,1.43752564364972,3.02008690903925,0.725362142011344,2.68875039313971,0.771778308107841,1.71920063963254,0.515672092277442,1.41621522601718,4.23192783417626,2.53532561402472,0.677689064138264,0,0.449949858640699,2.96659908770092,4.9733608046227,1.79760066311043,3.45796474789399,1.97010263386108,2.29510095163874,2.52389953621658,3.42781181284564,1.32521124570968,1.71487118900936,1.53352753629178,0.919218786610021,12.1127469099328,7.53355294702608,7.83393319606842,2.37395317914349,2.37867873366265,3.64639359389732,10.3297709630511,10.6924895906019,10.3902808488231,2.94628585473668,2.13557521198654,0.745597783301202,0.454357159999104,0.226714680320357,0.869593466105033,0.860423876981386,0,1.07940638327563,3.89865850468601,0,3.37066608316204,0.340860645156116,1.03914401841148,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,0.253359865475099,0.505524445014783,1.94112595522402,0.776813650941515,1.33597925158342,0.867426633830679,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.753999547978053,0.741584903203122,3.47038456607788,3.5384422077995,2.26473589926373,1.10420759230197,3.39412677194655,0,4.9772735491963,4.39838084308256,1.78819938646014,0.599075622529601,1.79970819298022,1.01656181658452,7.78911324905078,4.11750542536764,1.38219787324151,4.86708096538374,3.06858548796397,8.51930982694196,4.2182728397617,0.916554274652847,1.7416975885413,3.0326731012041,3.15662783829711,1.04096354370163,1.14951052216736,0.360124259610698,1.35634336052144,0.884474488967262,1.15302348256365,1.59292931751539,2.84573707812917,0,0.189106080167819,1.40760899331159,1.53437012699302,1.39023624612799,1.74126083261083,1.23469281844766,0.398068533636986,2.1066395619397,1.54408744268829,1.42081749697796,0.621377317606506,0.703578179943289,1.2604344302271,1.42046841351126,1.18058539048442,1.85120535464854,1.86027155800326,1.87791380979733,1.28441876603886,1.48103864922132,1.47750717671186,2.67527071501324,3.94739966048397,4.83010253640311,5.77087600669599,3.78521907415429,1.85228302282712,2.31293148088659,0.793351699990633,1.2797295032114,0,0.38660238396628,0.403367049246685,1.33426826306922,3.23383564391351,2.84717436926707,2.14108641141214,2.01068167040216,2.18852119245266,1.9496408711912,0.898819408654221,0.648414149624083,1.59313018603494,0.758671603812327,0.685491075658373,1.1270773567308,1.22190796707189,0.581857461502877,0.350679099451593,0.632365371242573,1.18088118383682,1.8839847340965,1.85095745882701,0.889357881261447,0.500535317148282,0.196558995113203,0.224862112384854,0.811440485554012,0.964708639009667,1.2731292589071,0.287696137450811,1.29708181420028,1.64736847912849,1.43768206527355,1.48856379067401,0.624075346229121,1.26289438973556,1.07638448113147,0.964887042726734,1.84753190166605,0.757965647081939,0.325929952884052,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.780534591431195,1.57635144106191,0.44292937929755,0.637819074629948,0.491589944147214,1.03610989119537,0.578596234326046,0,0.54390568381871,0,1.37968373152366,7.86697890940181,6.91548950893999,0.491804836130026,5.30188947129183,1.26203287766503,0.390438744296638,1.29254038639679,0.238968797952552,1.33679204449436,0.849229592366497,0,0.292255857911312,0,4.4984984299053,1.56134093729095,1.24645922567079,0.325773918707152,1.64970122972535,5.30980553359851,0.242780636154981,0.604647113929502,0.565815239267694,2.06711325016541,1.84461088766356,1.55056975900933,0.727067458955011,1.42598951353889,0.316036757935816,2.10837217149998,0,7.14923172082955,0.720244376125241,1.81102157295856,2.7863814554107,1.77340233642274,2.49716344642899,2.46823530903181,3.65357938937519,1.17335854031855,1.48282449604674,1.98475558249466,3.46261131177108,0.322928853391811,0.301564624640779,0.119372344003136,0.820704498725306,2.62332752966866,5.37733375830478,1.02522528478712,1.23832120777933,0.925972636848558,0.753473828018764,0.546776910884101,0.228778173206523,2.20971958992012,1.11961161858926,1.65839968565309,1.90934123603023,0.790839983952838,0.406638934253697,0.540026704109006,1.04544148007234,0.87345025498471,0.404593039154462,0.661227645802687,2.09404753587224,0.648074866458964,2.4853572523477,37.2037339531566,0.598066184175915,0.992750942742586,1.16670713006429,0.645799117388655,1.01373675294467,0.821500670520278,1.17183946359555,1.25831213310853,3.38217769156408,6.62469014393091,2.21207784439725,0.810900861160657,1.02710957164827,0.909445760844565,0.895133478337407,1.78813219303138,1.32214994471966,0.590758108698309,1.00966449948148,0.609654453239999,0.806609481094724,0.877120926657772,0.865906574762965,1.28564592399726,6.57518112484113,0.221985953374065,0.0897138566094757,0.335769232728157,2.89784391048286,0.750729901804728,0.73260649706906,0.857473516316263,6.01886524842436,2.82375921308533,5.52390283808612,4.58316410751517,3.95262319390481,5.48066015816514,6.7985450765073,4.05013500139084,3.60256962579376,4.07828168085784,2.07104124700728,0.93408612825759,0,1.19513524027894,0.972426868273176,1.46729213839588,1.65459157605013,1.33348036680969,1.44224540067226,0.320919209591815,0.758091635291392,2.02783439912192,0.565879024158229,1.77918864192777,1.40855335290712,1.32101578597911,0.952587382566147,2.0859178670074,1.92909220463705,2.06042950401653,2.35518272215036,2.05721551431249,1.06485483695602,1.66905332963125,0.726732083161643,1.31753132581463,1.4384483341585,2.56099162021882,1.31534855718921,1.08643291076689,1.68342681497322,1.54225523561426,1.97008964751127,1.22769312950907,1.39443157067369,1.35034627686799,2.24829520144151,1.40358965067245,1.28922632428979,2.48674831689496,3.08827986767322,3.47801753430632
|short_description=p4@Use1
}}

Revision as of 16:01, 14 September 2013

Short description:p4@Use1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Use1_5end
Coexpression cluster:MCL_coexpression_mm9:208
Association with transcript: -100bp_to_ENSMUST00000127517_5end
EntrezGene:Use1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Use1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G537.20
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.80e-1854
brain2.39e-1647
future brain2.39e-1647
neural tube2.54e-1652
neural rod2.54e-1652
future spinal cord2.54e-1652
neural keel2.54e-1652
regional part of brain8.39e-1646
central nervous system2.08e-1573
nervous system3.60e-1475
neurectoderm2.57e-1364
neural plate2.57e-1364
presumptive neural plate2.57e-1364
anterior neural tube8.65e-1340
regional part of forebrain3.53e-1239
forebrain3.53e-1239
future forebrain3.53e-1239
ectoderm-derived structure2.55e-1195
ectoderm2.55e-1195
presumptive ectoderm2.55e-1195
ecto-epithelium4.64e-1173
structure with developmental contribution from neural crest5.14e-1192
pre-chordal neural plate7.53e-1149
brain grey matter6.40e-1029
regional part of telencephalon6.40e-1029
telencephalon6.40e-1029
gray matter7.95e-1034
cerebral cortex7.39e-0721
cerebral hemisphere7.39e-0721
pallium7.39e-0721







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