FFCP PHASE1:Mm9::chr8:86773600..86773632,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=101966|HGNC=|UniProt=Q8R1F0|association_with_transcript=27bp_to_ENSMUST00000019506,NM_001007571,uc009mmh.2,uc012ghh.1_5end|description=CAGE_peak_1_at_D8Ertd738e_5end|id=chr8:86773600..86773632,-|ontology_enrichment_celltype=CL:0002371!1.57e-14!118;CL:0000063!5.84e-14!66;CL:0000144!4.24e-13!121;CL:0000012!4.24e-13!121;CL:0000548!6.67e-13!115;CL:0000004!6.67e-13!115;CL:0000255!6.67e-13!115;CL:0000066!7.30e-10!25;CL:0000219!9.38e-09!54;CL:0000223!3.26e-08!20;CL:0002076!2.62e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,7.30e-10,25;CL:0000219,9.38e-09,54;CL:0000223,3.26e-08,20;CL:0002076,2.62e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=122.033421493853,191.936474201649,184.274691952762,193.577095236371,179.821567050739,132.792504082305,135.495331545405,111.691674776963,206.95942156295,198.018589268406,150.671812038444,166.883356618244,104.261244528104,115.220090388239,108.926892113722,90.3039692558624,114.028586134888,94.0077252767548,83.9140333667121,108.219361208498,90.145887560134,94.7235674456446,106.308314179547,139.833377521437,140.398480013108,209.020434937867,180.920038386811,158.371356024128,146.508056400864,151.722138115478,164.524038906236,89.539324957808,74.422839297733,47.5445043046316,131.138635367079,151.605996566945,121.889105688634,195.454271554136,286.750071440235,229.303399860524,287.056966159135,282.097785287838,266.059673461072,100.21386710856,95.8012000024413,112.514159075111,179.950009200049,180.52482948301,147.629114797565,161.765676029804,133.687032652221,182.565756743514,153.856649754944,118.95939128986,102.172514939309,118.0820811405,107.736573416973,143.872513745406,94.6841036822918,92.5734213726058,109.652832806569,215.843966928037,190.309086367784,186.72919133589,184.918009800024,228.774597012644,149.500455148684,142.544991274297,77.9745884559752,100.984441872105,102.428256178123,139.397680389056,140.693260586178,105.83205052172,95.2703981921269,113.063910753033,82.5869107495415,98.4469376636797,103.223590348196,85.4623144491656,85.7239220554578,102.099020629125,141.266597494699,148.006566438332,106.80597519599,83.6745182745216,87.131468649051,95.8093151542045,110.408789879782,98.6208859393551,83.4809727460832,184.130709674017,158.433320753906,161.371254299707,189.734713894719,161.737706242138,128.647088840685,138.218991610805,194.060145438343,167.129618743391,113.519796340004,171.957479735186,196.200034574117,227.541345009066,148.945836215715,135.040808298228,147.107613499302,122.290935179113,49.4571357766098,86.6902092138577,119.531390141868,114.174554367053,130.758986944185,137.760493465097,92.7774899300711,135.217252270731,77.8664148363278,100.641152416259,96.4225501625363,119.222168411241,101.366256973321,105.217929930343,80.1484573237925,59.4345017933441,71.2118803165747,96.307309813639,129.879594964418,152.375293672326,144.351777955001,64.7095562228834,68.625090422794,71.4973263522198,67.4438362346033,79.2717917724025,77.2971525761563,88.4214883719279,102.755918124969,97.2862510170927,104.374499233108,88.806463184092,97.3300913361024,105.984870143831,83.008641840266,84.9975172593433,64.7707471920641,81.3522123808796,73.7432572285066,79.6806381876168,108.43070044522,73.9404773456173,71.4361564105632,97.1037094654156,83.692222016905,81.8392591327091,90.955704292311,90.7596256692329,112.354109970118,110.144904245098,108.550456769116,97.5562388642214,115.62134757068,147.29076627511,86.8853179597722,130.257921416781,140.383072727514,127.428601723224,146.745550565592,159.384692331186,163.901610513827,173.032507139366,142.113623133885,172.077385199616,176.957392924587,178.360330532534,70.2368428204185,62.0514812647085,108.70777960167,96.2600062655301,104.937819263335,94.288088775338,66.237875119556,65.7488290272097,83.3917664418264,89.0255930206777,112.463387586049,101.125158200543,107.571469366515,98.0855407162874,88.9036237263188,77.2984691442631,122.117998179202,103.553462092271,91.6095961603385,105.108631600951,69.8787961173099,92.661354169618,102.212960737339,92.3688747955495,90.1120654020666,123.992524302866,146.322814348161,158.812149967357,164.531208033368,86.7594549723689,90.6136967471866,97.5901567750265,89.4613135323298,89.9590805876515,127.822177594273,102.419824932489,93.0656201688703,129.318425611586,48.8811902193005,110.525861457546,132.928048746803,154.073115547738,151.590814426016,138.94373415265,90.1595568013031,121.463994944881,87.6751573258099,103.035267065539,107.957514212711,87.1032538697442,75.6978778017524,88.2004088317251,76.6106800356088,81.4990057907492,72.3924649704991,104.544794788641,102.056824282744,110.801178873438,126.664678508989,134.344703903221,116.056368432493,85.2644546081623,77.2248337841279,94.1209843335392,126.393842885417,172.185172353382,117.369057622847,116.741184544695,109.650509445995,110.642553452032,89.1194696329576,90.0183367908487,95.1305148936002,108.134667427185,101.19367115431,66.8348338157359,59.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| ||
|EntrezGene=101966 | |||
|HGNC= | |||
|UniProt=Q8R1F0 | |||
|association_with_transcript=27bp_to_ENSMUST00000019506,NM_001007571,uc009mmh.2,uc012ghh.1_5end | |||
|description=CAGE_peak_1_at_D8Ertd738e_5end | |||
|id=chr8:86773600..86773632,- | |||
|ontology_enrichment_celltype=CL:0002371!1.57e-14!118;CL:0000063!5.84e-14!66;CL:0000144!4.24e-13!121;CL:0000012!4.24e-13!121;CL:0000548!6.67e-13!115;CL:0000004!6.67e-13!115;CL:0000255!6.67e-13!115;CL:0000066!7.30e-10!25;CL:0000219!9.38e-09!54;CL:0000223!3.26e-08!20;CL:0002076!2.62e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.30e-10,25;CL:0000219,9.38e-09,54;CL:0000223,3.26e-08,20;CL:0002076,2.62e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=122.033421493853,191.936474201649,184.274691952762,193.577095236371,179.821567050739,132.792504082305,135.495331545405,111.691674776963,206.95942156295,198.018589268406,150.671812038444,166.883356618244,104.261244528104,115.220090388239,108.926892113722,90.3039692558624,114.028586134888,94.0077252767548,83.9140333667121,108.219361208498,90.145887560134,94.7235674456446,106.308314179547,139.833377521437,140.398480013108,209.020434937867,180.920038386811,158.371356024128,146.508056400864,151.722138115478,164.524038906236,89.539324957808,74.422839297733,47.5445043046316,131.138635367079,151.605996566945,121.889105688634,195.454271554136,286.750071440235,229.303399860524,287.056966159135,282.097785287838,266.059673461072,100.21386710856,95.8012000024413,112.514159075111,179.950009200049,180.52482948301,147.629114797565,161.765676029804,133.687032652221,182.565756743514,153.856649754944,118.95939128986,102.172514939309,118.0820811405,107.736573416973,143.872513745406,94.6841036822918,92.5734213726058,109.652832806569,215.843966928037,190.309086367784,186.72919133589,184.918009800024,228.774597012644,149.500455148684,142.544991274297,77.9745884559752,100.984441872105,102.428256178123,139.397680389056,140.693260586178,105.83205052172,95.2703981921269,113.063910753033,82.5869107495415,98.4469376636797,103.223590348196,85.4623144491656,85.7239220554578,102.099020629125,141.266597494699,148.006566438332,106.80597519599,83.6745182745216,87.131468649051,95.8093151542045,110.408789879782,98.6208859393551,83.4809727460832,184.130709674017,158.433320753906,161.371254299707,189.734713894719,161.737706242138,128.647088840685,138.218991610805,194.060145438343,167.129618743391,113.519796340004,171.957479735186,196.200034574117,227.541345009066,148.945836215715,135.040808298228,147.107613499302,122.290935179113,49.4571357766098,86.6902092138577,119.531390141868,114.174554367053,130.758986944185,137.760493465097,92.7774899300711,135.217252270731,77.8664148363278,100.641152416259,96.4225501625363,119.222168411241,101.366256973321,105.217929930343,80.1484573237925,59.4345017933441,71.2118803165747,96.307309813639,129.879594964418,152.375293672326,144.351777955001,64.7095562228834,68.625090422794,71.4973263522198,67.4438362346033,79.2717917724025,77.2971525761563,88.4214883719279,102.755918124969,97.2862510170927,104.374499233108,88.806463184092,97.3300913361024,105.984870143831,83.008641840266,84.9975172593433,64.7707471920641,81.3522123808796,73.7432572285066,79.6806381876168,108.43070044522,73.9404773456173,71.4361564105632,97.1037094654156,83.692222016905,81.8392591327091,90.955704292311,90.7596256692329,112.354109970118,110.144904245098,108.550456769116,97.5562388642214,115.62134757068,147.29076627511,86.8853179597722,130.257921416781,140.383072727514,127.428601723224,146.745550565592,159.384692331186,163.901610513827,173.032507139366,142.113623133885,172.077385199616,176.957392924587,178.360330532534,70.2368428204185,62.0514812647085,108.70777960167,96.2600062655301,104.937819263335,94.288088775338,66.237875119556,65.7488290272097,83.3917664418264,89.0255930206777,112.463387586049,101.125158200543,107.571469366515,98.0855407162874,88.9036237263188,77.2984691442631,122.117998179202,103.553462092271,91.6095961603385,105.108631600951,69.8787961173099,92.661354169618,102.212960737339,92.3688747955495,90.1120654020666,123.992524302866,146.322814348161,158.812149967357,164.531208033368,86.7594549723689,90.6136967471866,97.5901567750265,89.4613135323298,89.9590805876515,127.822177594273,102.419824932489,93.0656201688703,129.318425611586,48.8811902193005,110.525861457546,132.928048746803,154.073115547738,151.590814426016,138.94373415265,90.1595568013031,121.463994944881,87.6751573258099,103.035267065539,107.957514212711,87.1032538697442,75.6978778017524,88.2004088317251,76.6106800356088,81.4990057907492,72.3924649704991,104.544794788641,102.056824282744,110.801178873438,126.664678508989,134.344703903221,116.056368432493,85.2644546081623,77.2248337841279,94.1209843335392,126.393842885417,172.185172353382,117.369057622847,116.741184544695,109.650509445995,110.642553452032,89.1194696329576,90.0183367908487,95.1305148936002,108.134667427185,101.19367115431,66.8348338157359,59.7567758726811,101.319328486668,84.0496710264453,63.6784674673987,108.85101343877,124.546466347505,143.603689558257,151.072668884474,143.516719940056,123.588929473459,81.1464840548214,102.880045442134,117.644134866958,123.88640911084,176.049076320248,145.421115979943,87.8334182844773,106.055984384442,124.960488534141,104.167799025354,84.7686316810068,104.702495932415,97.2484711758535,93.1662744290674,107.948985709307,130.488555652113,112.469483008031,80.4644914354423,79.7634267877773,81.1811969532978,81.8894279861516,74.0275457850226,111.928641265863,75.653523220288,85.6063112797242,112.893616775883,93.152847266965,106.239809750646,107.441662988726,108.440854099892,88.7287404567925,78.5127647535721,78.2211851733039,144.155263320282,81.931022337514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| |||
|short_description=p1@D8Ertd738e | |||
}} | |||
Revision as of 16:15, 14 September 2013
| Short description: | p1@D8Ertd738e |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_D8Ertd738e_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 27bp_to_ENSMUST00000019506, NM_001007571, uc009mmh.2, uc012ghh.1_5end |
| EntrezGene: | D8Ertd738e |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 7.30e-10 | 25 |
| motile cell | 9.38e-09 | 54 |
| endodermal cell | 3.26e-08 | 20 |
| endo-epithelial cell | 2.62e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
