FFCP PHASE1:Mm9::chr9:111174316..111174327,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77781|HGNC=|MCL_coexpression_id=13|UniProt=Q8VEH5|association_with_transcript=-21bp_to_ENSMUST00000060711,NM_175266,uc009rvr.1_5end|description=CAGE_peak_4_at_Epm2aip1_5end|id=chr9:111174316..111174327,+|ontology_enrichment_celltype=CL:0000117!9.74e-11!23;CL:0000337!9.74e-11!23;CL:0000540!4.07e-08!33;CL:0000047!4.07e-08!33;CL:0000031!4.07e-08!33;CL:0000404!4.07e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-15,23;CL:0000337,2.72e-15,23;CL:0000540,1.18e-10,33;CL:0000047,1.18e-10,33;CL:0000031,1.18e-10,33;CL:0000404,1.18e-10,33;CL:0000393,8.23e-08,39;CL:0000211,8.23e-08,39;CL:0000221,9.78e-07,44;CL:0000133,9.78e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.92e-16!52;UBERON:0005068!9.92e-16!52;UBERON:0006241!9.92e-16!52;UBERON:0007135!9.92e-16!52;UBERON:0000033!4.71e-15!63;UBERON:0001017!3.34e-14!73;UBERON:0005743!3.34e-14!73;UBERON:0002346!9.49e-14!71;UBERON:0003075!9.49e-14!71;UBERON:0007284!9.49e-14!71;UBERON:0000073!1.11e-13!75;UBERON:0001016!1.11e-13!75;UBERON:0002616!1.25e-13!49;UBERON:0000955!1.61e-13!50;UBERON:0006238!1.61e-13!50;UBERON:0002020!1.11e-12!34;UBERON:0003056!1.33e-12!49;UBERON:0004121!1.73e-11!102;UBERON:0000924!1.73e-11!102;UBERON:0006601!1.73e-11!102;UBERON:0003080!2.10e-11!40;UBERON:0002780!7.53e-11!39;UBERON:0001890!7.53e-11!39;UBERON:0006240!7.53e-11!39;UBERON:0002791!1.37e-09!29;UBERON:0003528!1.37e-09!29;UBERON:0001893!1.37e-09!29;UBERON:0000153!2.90e-09!94;UBERON:0007811!1.36e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-22,54;UBERON:0001049,6.38e-21,52;UBERON:0005068,6.38e-21,52;UBERON:0006241,6.38e-21,52;UBERON:0007135,6.38e-21,52;UBERON:0002346,5.93e-20,64;UBERON:0003075,5.93e-20,64;UBERON:0007284,5.93e-20,64;UBERON:0001017,3.13e-19,73;UBERON:0001016,2.99e-18,75;UBERON:0002020,8.69e-18,34;UBERON:0010371,1.28e-17,73;UBERON:0004121,6.06e-16,95;UBERON:0000924,6.06e-16,95;UBERON:0006601,6.06e-16,95;UBERON:0002616,9.15e-16,46;UBERON:0000955,3.62e-15,47;UBERON:0006238,3.62e-15,47;UBERON:0003056,7.11e-15,49;UBERON:0003080,4.76e-14,40;UBERON:0002780,2.97e-13,39;UBERON:0001890,2.97e-13,39;UBERON:0006240,2.97e-13,39;UBERON:0003528,3.67e-13,29;UBERON:0002791,3.67e-13,29;UBERON:0001893,3.67e-13,29;UBERON:0010314,1.41e-12,92;UBERON:0002021,6.51e-09,10;UBERON:0000411,6.51e-09,10;UBERON:0001950,6.51e-09,10;UBERON:0000956,7.18e-09,21;UBERON:0001869,7.18e-09,21;UBERON:0000203,7.18e-09,21;UBERON:0003076,8.04e-08,12;UBERON:0003057,8.04e-08,12;UBERON:0002240,5.57e-07,6;UBERON:0005174,5.57e-07,6;UBERON:0001137,5.57e-07,6;UBERON:0002619,6.34e-07,17|phase1_expression=3.04282809499109,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0,0.516493293766305,0.140788722151667,0.468129052643987,0,0.319088635981346,1.36960583944965,0.174840804837995,0.333109761815663,0.404950534779652,0,0.157731082679119,0.274228867211478,0.42438965179803,0.340173160604279,0.297872853602656,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0,0.612508068787107,0,0,0,0.588231488031014,0,0,0.629484089877886,0.304130793658544,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,0,0.335565212115473,0,0.672187598284928,0.771778308107841,0,0,2.83243045203437,1.5869729378161,2.53532561402472,0,0,0.449949858640699,0,0,0,0.384218305321555,1.03689612308478,1.4850653216486,1.89292465216244,3.42781181284564,2.42955395046775,0.857435594504678,1.0543001812006,0,1.10115880999389,2.80912143787413,3.99376986466233,2.50583946687368,3.65950574409639,4.16730696445408,2.51264699101243,2.25105044012672,2.13917546887534,6.18720029494702,5.41012387036591,2.79599168737951,0.605809546665472,0.302286240427142,0.869593466105033,0,0.679971333707751,0,0,0.448026887097336,0.561777680527007,0,0,0,1.26759077799012,1.28326477414318,0,0,0,0,0,0.34255163915718,0.776813650941515,0.593768556259299,0.520455980298408,0,0.230615497256059,0.753613202763113,0.470354828542819,0.502666365318702,0,0.144599356919912,1.76922110389975,1.94120219936891,0.220841518460394,0.969750506270444,0,1.75668478206928,2.72280718857492,0,0.11981512450592,1.19980546198682,0.127070227073065,2.69623150928681,0.457500602818626,1.00523481690292,1.73824320192276,2.30143911597297,1.66230435647648,1.62241263067758,0.81471491080253,0.124406970610093,0.758168275301024,0.210441855886474,1.04096354370163,1.14951052216736,0.900310649026746,0.753524089178575,1.15662048557257,1.2811372028485,1.40552586839593,2.06962696591213,0.431135985865684,0.378212160335639,2.63926686245923,1.31517439456545,1.11218899690239,2.089512999133,0.205782136407943,0.59710280045548,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.710234206755631,0.393528463494808,0.617068451549513,0.232533944750408,1.07309360559848,1.16765342367169,0.329119699826961,0.492502392237286,0.972825714550269,1.31579988682799,0.658650345873152,0.805238512562231,1.89260953707715,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| ||
|EntrezGene=77781 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q8VEH5 | |||
|association_with_transcript=-21bp_to_ENSMUST00000060711,NM_175266,uc009rvr.1_5end | |||
|description=CAGE_peak_4_at_Epm2aip1_5end | |||
|id=chr9:111174316..111174327,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.74e-11!23;CL:0000337!9.74e-11!23;CL:0000540!4.07e-08!33;CL:0000047!4.07e-08!33;CL:0000031!4.07e-08!33;CL:0000404!4.07e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.72e-15,23;CL:0000337,2.72e-15,23;CL:0000540,1.18e-10,33;CL:0000047,1.18e-10,33;CL:0000031,1.18e-10,33;CL:0000404,1.18e-10,33;CL:0000393,8.23e-08,39;CL:0000211,8.23e-08,39;CL:0000221,9.78e-07,44;CL:0000133,9.78e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.92e-16!52;UBERON:0005068!9.92e-16!52;UBERON:0006241!9.92e-16!52;UBERON:0007135!9.92e-16!52;UBERON:0000033!4.71e-15!63;UBERON:0001017!3.34e-14!73;UBERON:0005743!3.34e-14!73;UBERON:0002346!9.49e-14!71;UBERON:0003075!9.49e-14!71;UBERON:0007284!9.49e-14!71;UBERON:0000073!1.11e-13!75;UBERON:0001016!1.11e-13!75;UBERON:0002616!1.25e-13!49;UBERON:0000955!1.61e-13!50;UBERON:0006238!1.61e-13!50;UBERON:0002020!1.11e-12!34;UBERON:0003056!1.33e-12!49;UBERON:0004121!1.73e-11!102;UBERON:0000924!1.73e-11!102;UBERON:0006601!1.73e-11!102;UBERON:0003080!2.10e-11!40;UBERON:0002780!7.53e-11!39;UBERON:0001890!7.53e-11!39;UBERON:0006240!7.53e-11!39;UBERON:0002791!1.37e-09!29;UBERON:0003528!1.37e-09!29;UBERON:0001893!1.37e-09!29;UBERON:0000153!2.90e-09!94;UBERON:0007811!1.36e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-22,54;UBERON:0001049,6.38e-21,52;UBERON:0005068,6.38e-21,52;UBERON:0006241,6.38e-21,52;UBERON:0007135,6.38e-21,52;UBERON:0002346,5.93e-20,64;UBERON:0003075,5.93e-20,64;UBERON:0007284,5.93e-20,64;UBERON:0001017,3.13e-19,73;UBERON:0001016,2.99e-18,75;UBERON:0002020,8.69e-18,34;UBERON:0010371,1.28e-17,73;UBERON:0004121,6.06e-16,95;UBERON:0000924,6.06e-16,95;UBERON:0006601,6.06e-16,95;UBERON:0002616,9.15e-16,46;UBERON:0000955,3.62e-15,47;UBERON:0006238,3.62e-15,47;UBERON:0003056,7.11e-15,49;UBERON:0003080,4.76e-14,40;UBERON:0002780,2.97e-13,39;UBERON:0001890,2.97e-13,39;UBERON:0006240,2.97e-13,39;UBERON:0003528,3.67e-13,29;UBERON:0002791,3.67e-13,29;UBERON:0001893,3.67e-13,29;UBERON:0010314,1.41e-12,92;UBERON:0002021,6.51e-09,10;UBERON:0000411,6.51e-09,10;UBERON:0001950,6.51e-09,10;UBERON:0000956,7.18e-09,21;UBERON:0001869,7.18e-09,21;UBERON:0000203,7.18e-09,21;UBERON:0003076,8.04e-08,12;UBERON:0003057,8.04e-08,12;UBERON:0002240,5.57e-07,6;UBERON:0005174,5.57e-07,6;UBERON:0001137,5.57e-07,6;UBERON:0002619,6.34e-07,17 | |||
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| |||
|short_description=p4@Epm2aip1 | |||
}} | |||
Revision as of 16:59, 14 September 2013
| Short description: | p4@Epm2aip1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Epm2aip1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:13 |
| Association with transcript: | -21bp_to_ENSMUST00000060711, NM_175266, uc009rvr.1_5end |
| EntrezGene: | Epm2aip1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.72e-15 | 23 |
| neuroblast (sensu Vertebrata) | 2.72e-15 | 23 |
| neuron | 1.18e-10 | 33 |
| neuronal stem cell | 1.18e-10 | 33 |
| neuroblast | 1.18e-10 | 33 |
| electrically signaling cell | 1.18e-10 | 33 |
| electrically responsive cell | 8.23e-08 | 39 |
| electrically active cell | 8.23e-08 | 39 |
| ectodermal cell | 9.78e-07 | 44 |
| neurectodermal cell | 9.78e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
