FFCP PHASE1:Mm9::chr9:53823159..53823170,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=270162|HGNC=|MCL_coexpression_id=2|UniProt=Q0P556,Q3V1U8,B7ZN22|association_with_transcript=-51bp_to_ENSMUST00000048409,NM_177769,uc009pmq.1,uc009pmr.1,uc009pms.1_5end|description=CAGE_peak_4_at_Elmod1_5end|id=chr9:53823159..53823170,-|ontology_enrichment_celltype=CL:0000117!1.77e-15!23;CL:0000337!1.77e-15!23;CL:0000540!9.54e-10!33;CL:0000047!9.54e-10!33;CL:0000031!9.54e-10!33;CL:0000404!9.54e-10!33;CL:0000393!2.70e-07!39;CL:0000211!2.70e-07!39;CL:0002609!6.46e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-16,23;CL:0000337,2.62e-16,23;CL:0002609,2.29e-11,6;CL:0000540,2.58e-10,33;CL:0000047,2.58e-10,33;CL:0000031,2.58e-10,33;CL:0000404,2.58e-10,33;CL:0000393,3.25e-08,39;CL:0000211,3.25e-08,39;CL:0002319,3.78e-07,43;CL:0000221,6.49e-07,44;CL:0000133,6.49e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.43e-29!34;UBERON:0001049!1.03e-28!52;UBERON:0005068!1.03e-28!52;UBERON:0006241!1.03e-28!52;UBERON:0007135!1.03e-28!52;UBERON:0000955!3.51e-25!50;UBERON:0006238!3.51e-25!50;UBERON:0002616!3.56e-24!49;UBERON:0002791!4.14e-24!29;UBERON:0003528!4.14e-24!29;UBERON:0001893!4.14e-24!29;UBERON:0001017!6.64e-24!73;UBERON:0005743!6.64e-24!73;UBERON:0000073!7.68e-23!75;UBERON:0001016!7.68e-23!75;UBERON:0000033!2.01e-21!63;UBERON:0002346!3.01e-21!71;UBERON:0003075!3.01e-21!71;UBERON:0007284!3.01e-21!71;UBERON:0003080!7.54e-21!40;UBERON:0002780!5.42e-20!39;UBERON:0001890!5.42e-20!39;UBERON:0006240!5.42e-20!39;UBERON:0000956!3.12e-19!21;UBERON:0001869!3.12e-19!21;UBERON:0000203!3.12e-19!21;UBERON:0004121!6.80e-19!102;UBERON:0000924!6.80e-19!102;UBERON:0006601!6.80e-19!102;UBERON:0003056!3.60e-17!49;UBERON:0002619!2.98e-15!17;UBERON:0002021!3.41e-13!10;UBERON:0000411!3.41e-13!10;UBERON:0001950!3.41e-13!10;UBERON:0007811!4.56e-12!86;UBERON:0000153!5.75e-10!94;UBERON:0003076!2.75e-08!12;UBERON:0003057!2.75e-08!12;UBERON:0002240!5.71e-07!6;UBERON:0005174!5.71e-07!6;UBERON:0001137!5.71e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.78e-45,54;UBERON:0001049,1.21e-43,52;UBERON:0005068,1.21e-43,52;UBERON:0006241,1.21e-43,52;UBERON:0007135,1.21e-43,52;UBERON:0002020,8.85e-42,34;UBERON:0001017,4.13e-37,73;UBERON:0001016,6.83e-36,75;UBERON:0000955,2.60e-35,47;UBERON:0006238,2.60e-35,47;UBERON:0000956,6.86e-35,21;UBERON:0001869,6.86e-35,21;UBERON:0000203,6.86e-35,21;UBERON:0002346,6.25e-34,64;UBERON:0003075,6.25e-34,64;UBERON:0007284,6.25e-34,64;UBERON:0002616,1.39e-33,46;UBERON:0003528,7.77e-33,29;UBERON:0002791,7.77e-33,29;UBERON:0001893,7.77e-33,29;UBERON:0003080,4.77e-29,40;UBERON:0010371,9.72e-29,73;UBERON:0002780,1.40e-27,39;UBERON:0001890,1.40e-27,39;UBERON:0006240,1.40e-27,39;UBERON:0002619,1.51e-27,17;UBERON:0004121,1.59e-26,95;UBERON:0000924,1.59e-26,95;UBERON:0006601,1.59e-26,95;UBERON:0002021,7.60e-23,10;UBERON:0000411,7.60e-23,10;UBERON:0001950,7.60e-23,10;UBERON:0003056,1.60e-22,49;UBERON:0010314,4.13e-21,92;UBERON:0000025,1.88e-15,114;UBERON:0003076,1.23e-14,12;UBERON:0003057,1.23e-14,12;UBERON:0004111,6.67e-14,122;UBERON:0002240,1.83e-11,6;UBERON:0005174,1.83e-11,6;UBERON:0001137,1.83e-11,6;UBERON:0001948,4.51e-10,5;UBERON:0002315,4.51e-10,5;UBERON:0011216,1.59e-08,194;UBERON:0000483,2.57e-07,174;UBERON:0001954,2.96e-07,7;UBERON:0003022,2.96e-07,7;UBERON:0002421,2.96e-07,7;UBERON:0000349,2.96e-07,7;UBERON:0002600,2.96e-07,7;UBERON:0000119,3.84e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,0,0,2.17748185847803,1.75507719831198,1.89292465216244,1.99955689082663,1.76694832761291,1.5923803897944,1.53352753629178,1.83843757322004,0,2.80912143787413,1.99688493233117,0.659431438650969,0.914876436024097,0.52091337055676,0.279182999001381,0,1.98637722109853,2.35702868378934,2.98980529678116,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,1.49790639404823,8.23501085073528,3.14135880282161,6.43149984711423,6.90431734791892,1.24672826735736,3.0825839982874,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,6.07137213037778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4245405375755,12.889106622201,16.6139698897425,8.248952752497,6.16574267793578,5.2877572817279,9.45031500324528,9.45674526770863,8.60970577069989,12.4262474820437,0.103787347584177,0,0.170733605754134,0.729320151204882,0,0.551530525350042,1.33348036680969,0.412070114477788,0.962757628775446,0,0.25347929989024,0.377252682772152,0.468207537349412,0.128050304809739,0.459483751644906,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.788035859004508,0.818462086339379,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,0,0,0,0.231867835620421|short_description=p4@Elmod1}} | ||
|EntrezGene=270162 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q0P556,Q3V1U8,B7ZN22 | |||
|association_with_transcript=-51bp_to_ENSMUST00000048409,NM_177769,uc009pmq.1,uc009pmr.1,uc009pms.1_5end | |||
|description=CAGE_peak_4_at_Elmod1_5end | |||
|id=chr9:53823159..53823170,- | |||
|ontology_enrichment_celltype=CL:0000117!1.77e-15!23;CL:0000337!1.77e-15!23;CL:0000540!9.54e-10!33;CL:0000047!9.54e-10!33;CL:0000031!9.54e-10!33;CL:0000404!9.54e-10!33;CL:0000393!2.70e-07!39;CL:0000211!2.70e-07!39;CL:0002609!6.46e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.62e-16,23;CL:0000337,2.62e-16,23;CL:0002609,2.29e-11,6;CL:0000540,2.58e-10,33;CL:0000047,2.58e-10,33;CL:0000031,2.58e-10,33;CL:0000404,2.58e-10,33;CL:0000393,3.25e-08,39;CL:0000211,3.25e-08,39;CL:0002319,3.78e-07,43;CL:0000221,6.49e-07,44;CL:0000133,6.49e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.43e-29!34;UBERON:0001049!1.03e-28!52;UBERON:0005068!1.03e-28!52;UBERON:0006241!1.03e-28!52;UBERON:0007135!1.03e-28!52;UBERON:0000955!3.51e-25!50;UBERON:0006238!3.51e-25!50;UBERON:0002616!3.56e-24!49;UBERON:0002791!4.14e-24!29;UBERON:0003528!4.14e-24!29;UBERON:0001893!4.14e-24!29;UBERON:0001017!6.64e-24!73;UBERON:0005743!6.64e-24!73;UBERON:0000073!7.68e-23!75;UBERON:0001016!7.68e-23!75;UBERON:0000033!2.01e-21!63;UBERON:0002346!3.01e-21!71;UBERON:0003075!3.01e-21!71;UBERON:0007284!3.01e-21!71;UBERON:0003080!7.54e-21!40;UBERON:0002780!5.42e-20!39;UBERON:0001890!5.42e-20!39;UBERON:0006240!5.42e-20!39;UBERON:0000956!3.12e-19!21;UBERON:0001869!3.12e-19!21;UBERON:0000203!3.12e-19!21;UBERON:0004121!6.80e-19!102;UBERON:0000924!6.80e-19!102;UBERON:0006601!6.80e-19!102;UBERON:0003056!3.60e-17!49;UBERON:0002619!2.98e-15!17;UBERON:0002021!3.41e-13!10;UBERON:0000411!3.41e-13!10;UBERON:0001950!3.41e-13!10;UBERON:0007811!4.56e-12!86;UBERON:0000153!5.75e-10!94;UBERON:0003076!2.75e-08!12;UBERON:0003057!2.75e-08!12;UBERON:0002240!5.71e-07!6;UBERON:0005174!5.71e-07!6;UBERON:0001137!5.71e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.78e-45,54;UBERON:0001049,1.21e-43,52;UBERON:0005068,1.21e-43,52;UBERON:0006241,1.21e-43,52;UBERON:0007135,1.21e-43,52;UBERON:0002020,8.85e-42,34;UBERON:0001017,4.13e-37,73;UBERON:0001016,6.83e-36,75;UBERON:0000955,2.60e-35,47;UBERON:0006238,2.60e-35,47;UBERON:0000956,6.86e-35,21;UBERON:0001869,6.86e-35,21;UBERON:0000203,6.86e-35,21;UBERON:0002346,6.25e-34,64;UBERON:0003075,6.25e-34,64;UBERON:0007284,6.25e-34,64;UBERON:0002616,1.39e-33,46;UBERON:0003528,7.77e-33,29;UBERON:0002791,7.77e-33,29;UBERON:0001893,7.77e-33,29;UBERON:0003080,4.77e-29,40;UBERON:0010371,9.72e-29,73;UBERON:0002780,1.40e-27,39;UBERON:0001890,1.40e-27,39;UBERON:0006240,1.40e-27,39;UBERON:0002619,1.51e-27,17;UBERON:0004121,1.59e-26,95;UBERON:0000924,1.59e-26,95;UBERON:0006601,1.59e-26,95;UBERON:0002021,7.60e-23,10;UBERON:0000411,7.60e-23,10;UBERON:0001950,7.60e-23,10;UBERON:0003056,1.60e-22,49;UBERON:0010314,4.13e-21,92;UBERON:0000025,1.88e-15,114;UBERON:0003076,1.23e-14,12;UBERON:0003057,1.23e-14,12;UBERON:0004111,6.67e-14,122;UBERON:0002240,1.83e-11,6;UBERON:0005174,1.83e-11,6;UBERON:0001137,1.83e-11,6;UBERON:0001948,4.51e-10,5;UBERON:0002315,4.51e-10,5;UBERON:0011216,1.59e-08,194;UBERON:0000483,2.57e-07,174;UBERON:0001954,2.96e-07,7;UBERON:0003022,2.96e-07,7;UBERON:0002421,2.96e-07,7;UBERON:0000349,2.96e-07,7;UBERON:0002600,2.96e-07,7;UBERON:0000119,3.84e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,0,0,2.17748185847803,1.75507719831198,1.89292465216244,1.99955689082663,1.76694832761291,1.5923803897944,1.53352753629178,1.83843757322004,0,2.80912143787413,1.99688493233117,0.659431438650969,0.914876436024097,0.52091337055676,0.279182999001381,0,1.98637722109853,2.35702868378934,2.98980529678116,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,2.34224637609238,1.04723353406728,0,0,0,0,1.49790639404823,8.23501085073528,3.14135880282161,6.43149984711423,6.90431734791892,1.24672826735736,3.0825839982874,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,6.07137213037778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4245405375755,12.889106622201,16.6139698897425,8.248952752497,6.16574267793578,5.2877572817279,9.45031500324528,9.45674526770863,8.60970577069989,12.4262474820437,0.103787347584177,0,0.170733605754134,0.729320151204882,0,0.551530525350042,1.33348036680969,0.412070114477788,0.962757628775446,0,0.25347929989024,0.377252682772152,0.468207537349412,0.128050304809739,0.459483751644906,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.788035859004508,0.818462086339379,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p4@Elmod1 | |||
}} |
Revision as of 18:14, 14 September 2013
Short description: | p4@Elmod1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Elmod1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -51bp_to_ENSMUST00000048409, NM_177769, uc009pmq.1, uc009pmr.1, uc009pms.1_5end |
EntrezGene: | Elmod1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.62e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.62e-16 | 23 |
neuron of cerebral cortex | 2.29e-11 | 6 |
neuron | 2.58e-10 | 33 |
neuronal stem cell | 2.58e-10 | 33 |
neuroblast | 2.58e-10 | 33 |
electrically signaling cell | 2.58e-10 | 33 |
electrically responsive cell | 3.25e-08 | 39 |
electrically active cell | 3.25e-08 | 39 |
neural cell | 3.78e-07 | 43 |
ectodermal cell | 6.49e-07 | 44 |
neurectodermal cell | 6.49e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.