FFCP PHASE1:Mm9::chr9:77484520..77484539,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=244923|HGNC=|MCL_coexpression_id=14|UniProt=G3X9D8,Q8BWA5|association_with_transcript=0bp_to_ENSMUST00000057781,NM_172925,uc009qtl.1_5end|description=CAGE_peak_4_at_Klhl31_5end|id=chr9:77484520..77484539,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.58e-10!18;UBERON:0000948!3.58e-10!18;UBERON:0005498!3.58e-10!18;UBERON:0004140!3.58e-10!18;UBERON:0009881!3.58e-10!18;UBERON:0004141!3.58e-10!18;UBERON:0003084!3.58e-10!18;UBERON:0007005!3.58e-10!18;UBERON:0004139!3.58e-10!18;UBERON:0004291!3.58e-10!18;UBERON:0003102!7.54e-08!23;UBERON:0004535!2.06e-07!23;UBERON:0001009!2.06e-07!23;UBERON:0000026!7.07e-07!13;UBERON:0004708!7.07e-07!13;UBERON:0002101!7.07e-07!13;UBERON:0004357!7.07e-07!13;UBERON:0009872!7.07e-07!13;UBERON:0004347!7.07e-07!13;UBERON:0005732!7.07e-07!13;UBERON:0005733!7.07e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.35e-13,18;UBERON:0000948,2.35e-13,18;UBERON:0005498,2.35e-13,18;UBERON:0004140,2.35e-13,18;UBERON:0009881,2.35e-13,18;UBERON:0004141,2.35e-13,18;UBERON:0003084,2.35e-13,18;UBERON:0007005,2.35e-13,18;UBERON:0004139,2.35e-13,18;UBERON:0004291,2.35e-13,18;UBERON:0004535,1.99e-09,23;UBERON:0001009,1.99e-09,23;UBERON:0003102,2.16e-08,22;UBERON:0000026,4.14e-08,12;UBERON:0004708,4.14e-08,12;UBERON:0002101,4.14e-08,12;UBERON:0004357,4.14e-08,12;UBERON:0004347,4.14e-08,12;UBERON:0005732,4.14e-08,12;UBERON:0005733,4.14e-08,12;UBERON:0005418,8.94e-08,5;UBERON:0002472,8.94e-08,5;UBERON:0008784,8.94e-08,5;UBERON:0006058,8.94e-08,5;UBERON:0004709,8.94e-08,5;UBERON:0002529,8.94e-08,5;UBERON:0010538,8.94e-08,5;UBERON:0005420,8.94e-08,5;UBERON:0010758,8.94e-08,5;UBERON:0000978,8.94e-08,5;UBERON:0002103,8.94e-08,5;UBERON:0000376,8.94e-08,5;UBERON:0000154,8.94e-08,5;UBERON:0010709,8.94e-08,5;UBERON:0005730,8.94e-08,5;UBERON:0010707,2.71e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,25.7013288841106,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,0,0.578397427679647,16.8076004870476,14.5590164952668,47.9226095059054,42.1841470227643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45492976636707,0,4.8401626853889,0.260240885925407,0.689706313300419,0.720248519221397,1.20563854268572,0.816437989815934,1.0249097622788,1.3118241438362,2.32833033665114,0.215567992932842,1.32374256117473,1.58356011747554,1.97276159184817,0.834141747676794,4.52727816478817,2.05782136407943,0,0,0,0,7.45652781127807,4.69052119962192,7.20248245844059,3.31442629819294,4.9191057936851,9.56456099901745,11.39416329277,8.04820204198858,8.52386999280337,11.5191894939436,22.326775114757,26.99591357877,27.0469976736865,29.2001653337097,18.788898626452,0,0,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0,1.24815069245824,0,0.896987067609561,0,0.184753190166605,0.757965647081939,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.630540576424764,0.221464689648775,0.478364305972461,0.983179888294428,2.07221978239075,0.144649058581512,0,0,3.44234991113325,0.275936746304732,0.160550589987792,0,0,172.185172353382,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.661585194164886,16.6535115470895,3.22928853391811,3.61877549568935,1.19372344003136,0.328281799490123,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,3.40282724579238,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,18.7219504067613,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0,0,0,0,0,48.29357171004,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.59609949360412,1.53660245178721,3.40349403895612,1.46729213839588,2.02227859295016,3.55594764482584,4.53277125925567,6.09746498224449,6.06473308233114,3.8021894983536,7.1678009726709,6.9294715527713,8.1311943554184,7.52404643318534,4.76293691283074,5.09891034157364,6.55891349576597,7.41754621445952,7.21274708658547,4.4573002810104,6.92155644021416,5.96090474868302,7.70336008151341,6.86998477031913,5.4153349050673,5.3049112133104,8.15516105457313,4.34573164306758,2.80571135828869,4.27086065247027,3.94017929502254,9.41231399290286,5.73266312388074,4.62975866354739,3.2475375131933,7.95367468714389,8.37997110788363,14.1553365730944,13.2354851471709,22.4911800551809|short_description=p4@Klhl31}} | ||
|EntrezGene=244923 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|UniProt=G3X9D8,Q8BWA5 | |||
|association_with_transcript=0bp_to_ENSMUST00000057781,NM_172925,uc009qtl.1_5end | |||
|description=CAGE_peak_4_at_Klhl31_5end | |||
|id=chr9:77484520..77484539,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.58e-10!18;UBERON:0000948!3.58e-10!18;UBERON:0005498!3.58e-10!18;UBERON:0004140!3.58e-10!18;UBERON:0009881!3.58e-10!18;UBERON:0004141!3.58e-10!18;UBERON:0003084!3.58e-10!18;UBERON:0007005!3.58e-10!18;UBERON:0004139!3.58e-10!18;UBERON:0004291!3.58e-10!18;UBERON:0003102!7.54e-08!23;UBERON:0004535!2.06e-07!23;UBERON:0001009!2.06e-07!23;UBERON:0000026!7.07e-07!13;UBERON:0004708!7.07e-07!13;UBERON:0002101!7.07e-07!13;UBERON:0004357!7.07e-07!13;UBERON:0009872!7.07e-07!13;UBERON:0004347!7.07e-07!13;UBERON:0005732!7.07e-07!13;UBERON:0005733!7.07e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.35e-13,18;UBERON:0000948,2.35e-13,18;UBERON:0005498,2.35e-13,18;UBERON:0004140,2.35e-13,18;UBERON:0009881,2.35e-13,18;UBERON:0004141,2.35e-13,18;UBERON:0003084,2.35e-13,18;UBERON:0007005,2.35e-13,18;UBERON:0004139,2.35e-13,18;UBERON:0004291,2.35e-13,18;UBERON:0004535,1.99e-09,23;UBERON:0001009,1.99e-09,23;UBERON:0003102,2.16e-08,22;UBERON:0000026,4.14e-08,12;UBERON:0004708,4.14e-08,12;UBERON:0002101,4.14e-08,12;UBERON:0004357,4.14e-08,12;UBERON:0004347,4.14e-08,12;UBERON:0005732,4.14e-08,12;UBERON:0005733,4.14e-08,12;UBERON:0005418,8.94e-08,5;UBERON:0002472,8.94e-08,5;UBERON:0008784,8.94e-08,5;UBERON:0006058,8.94e-08,5;UBERON:0004709,8.94e-08,5;UBERON:0002529,8.94e-08,5;UBERON:0010538,8.94e-08,5;UBERON:0005420,8.94e-08,5;UBERON:0010758,8.94e-08,5;UBERON:0000978,8.94e-08,5;UBERON:0002103,8.94e-08,5;UBERON:0000376,8.94e-08,5;UBERON:0000154,8.94e-08,5;UBERON:0010709,8.94e-08,5;UBERON:0005730,8.94e-08,5;UBERON:0010707,2.71e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,25.7013288841106,0,0,0,0,0,0,0,0,0,0,4.45317130904334,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,0,0.578397427679647,16.8076004870476,14.5590164952668,47.9226095059054,42.1841470227643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45492976636707,0,4.8401626853889,0.260240885925407,0.689706313300419,0.720248519221397,1.20563854268572,0.816437989815934,1.0249097622788,1.3118241438362,2.32833033665114,0.215567992932842,1.32374256117473,1.58356011747554,1.97276159184817,0.834141747676794,4.52727816478817,2.05782136407943,0,0,0,0,7.45652781127807,4.69052119962192,7.20248245844059,3.31442629819294,4.9191057936851,9.56456099901745,11.39416329277,8.04820204198858,8.52386999280337,11.5191894939436,22.326775114757,26.99591357877,27.0469976736865,29.2001653337097,18.788898626452,0,0,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0,1.24815069245824,0,0.896987067609561,0,0.184753190166605,0.757965647081939,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.630540576424764,0.221464689648775,0.478364305972461,0.983179888294428,2.07221978239075,0.144649058581512,0,0,3.44234991113325,0.275936746304732,0.160550589987792,0,0,172.185172353382,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.661585194164886,16.6535115470895,3.22928853391811,3.61877549568935,1.19372344003136,0.328281799490123,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,3.40282724579238,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,18.7219504067613,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0,0,0,0,0,48.29357171004,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,1.59609949360412,1.53660245178721,3.40349403895612,1.46729213839588,2.02227859295016,3.55594764482584,4.53277125925567,6.09746498224449,6.06473308233114,3.8021894983536,7.1678009726709,6.9294715527713,8.1311943554184,7.52404643318534,4.76293691283074,5.09891034157364,6.55891349576597,7.41754621445952,7.21274708658547,4.4573002810104,6.92155644021416,5.96090474868302,7.70336008151341,6.86998477031913,5.4153349050673,5.3049112133104,8.15516105457313,4.34573164306758,2.80571135828869,4.27086065247027,3.94017929502254,9.41231399290286,5.73266312388074,4.62975866354739,3.2475375131933,7.95367468714389,8.37997110788363,14.1553365730944,13.2354851471709,22.4911800551809 | |||
|short_description=p4@Klhl31 | |||
}} |
Revision as of 18:48, 14 September 2013
Short description: | p4@Klhl31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Klhl31_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 0bp_to_ENSMUST00000057781, NM_172925, uc009qtl.1_5end |
EntrezGene: | Klhl31 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.35e-13 | 18 |
heart | 2.35e-13 | 18 |
primitive heart tube | 2.35e-13 | 18 |
primary heart field | 2.35e-13 | 18 |
anterior lateral plate mesoderm | 2.35e-13 | 18 |
heart tube | 2.35e-13 | 18 |
heart primordium | 2.35e-13 | 18 |
cardiac mesoderm | 2.35e-13 | 18 |
cardiogenic plate | 2.35e-13 | 18 |
heart rudiment | 2.35e-13 | 18 |
cardiovascular system | 1.99e-09 | 23 |
circulatory system | 1.99e-09 | 23 |
surface structure | 2.16e-08 | 22 |
appendage | 4.14e-08 | 12 |
paired limb/fin | 4.14e-08 | 12 |
limb | 4.14e-08 | 12 |
paired limb/fin bud | 4.14e-08 | 12 |
limb bud | 4.14e-08 | 12 |
limb/fin field | 4.14e-08 | 12 |
limb field | 4.14e-08 | 12 |
hindlimb bud | 8.94e-08 | 5 |
stylopod | 8.94e-08 | 5 |
lower limb segment | 8.94e-08 | 5 |
multi-limb segment region | 8.94e-08 | 5 |
pelvic appendage | 8.94e-08 | 5 |
limb segment | 8.94e-08 | 5 |
paired limb/fin segment | 8.94e-08 | 5 |
pelvic appendage bud | 8.94e-08 | 5 |
subdivision of organism along appendicular axis | 8.94e-08 | 5 |
leg | 8.94e-08 | 5 |
hindlimb | 8.94e-08 | 5 |
hindlimb stylopod | 8.94e-08 | 5 |
posterior region of body | 8.94e-08 | 5 |
pelvic complex | 8.94e-08 | 5 |
hindlimb/pelvic fin field | 8.94e-08 | 5 |
appendage girdle complex | 2.71e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.