FFCP PHASE1:Hg19::chr1:101705165..101705181,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3839 | |||
|description=CAGE_peak_at_chr1:101705165..101705181,+ | |||
|id=chr1:101705165..101705181,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.86e-25!24;CL:0000071!3.62e-19!18;CL:0002546!3.62e-19!18;CL:0000115!1.08e-18!35;CL:0002078!2.08e-13!44;CL:1000413!4.46e-12!9;CL:0000213!9.50e-10!57;CL:0000215!9.50e-10!57;CL:0000084!9.02e-09!25;CL:0000827!9.02e-09!25;CL:0000791!3.39e-08!18;CL:0000789!3.39e-08!18;CL:0002420!3.39e-08!18;CL:0002419!3.39e-08!18;CL:0000790!3.39e-08!18;CL:0005020!1.61e-07!6;CL:0002138!1.61e-07!6;CL:0005022!1.61e-07!6;CL:0002544!2.02e-07!6;CL:0000542!2.46e-07!53;CL:0000051!2.46e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.68e-60;24!CL:0000071;1.13e-40;18!CL:0000115;1.27e-37;36!CL:1000413;5.72e-30;9!CL:0002078;5.16e-23;45!CL:0002138;7.04e-21;6!CL:0000213;1.06e-14;58!CL:0000215;1.06e-14;58!CL:0002544;6.12e-12;6!CL:0002144;2.14e-11;3!CL:0000076;2.13e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.54e-60,24;CL:0000115,5.39e-45,36;CL:0000071,8.47e-41,18;CL:0002546,8.47e-41,18;CL:0002078,1.82e-35,45;CL:1000413,6.70e-30,9;CL:0000213,6.49e-27,58;CL:0000215,6.49e-27,58;CL:0005020,8.67e-21,6;CL:0002138,8.67e-21,6;CL:0005022,8.67e-21,6;CL:0002544,7.83e-12,6;CL:0000222,1.79e-11,121;CL:0002144,2.51e-11,3;CL:0000076,1.56e-10,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.13e-40;18!CL:0005022;7.04e-21;6!UBERON:0010226;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.62e-19!18;UBERON:0004638!3.62e-19!18;UBERON:0004852!3.62e-19!18;UBERON:0007023!4.60e-16!115;UBERON:0000487!8.29e-15!22;UBERON:0006914!1.80e-12!25;UBERON:0003915!4.46e-12!9;UBERON:0004700!4.46e-12!9;UBERON:0001917!4.46e-12!9;UBERON:0001009!1.91e-11!113;UBERON:0004535!1.60e-10!110;UBERON:0000055!1.01e-07!69;UBERON:0000178!1.25e-07!15;UBERON:0000179!1.25e-07!15;UBERON:0000463!1.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.13e-40;18!UBERON:0001986;1.13e-40;18!UBERON:0004852;1.13e-40;18!UBERON:0000487;5.27e-33;22!UBERON:0003915;5.72e-30;9!UBERON:0004700;5.72e-30;9!UBERON:0001917;5.72e-30;9!UBERON:0006914;7.33e-29;25!UBERON:0000490;1.01e-20;33!UBERON:0001473;1.01e-15;8!UBERON:0004536;1.01e-15;8!UBERON:0006558;1.01e-15;8!UBERON:0000055;2.48e-13;65!UBERON:0002465;1.29e-12;10!UBERON:0010523;2.14e-11;3!UBERON:0001915;2.14e-11;3!UBERON:0001982;2.14e-11;3!UBERON:0007500;9.46e-10;56!UBERON:0001981;9.46e-10;56!UBERON:0004537;9.46e-10;56!UBERON:0002084;6.46e-09;1!UBERON:0002082;6.46e-09;1!UBERON:0002049;9.78e-09;75!UBERON:0007798;9.78e-09;75!UBERON:0002193;4.46e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.47e-41,18;UBERON:0001986,8.47e-41,18;UBERON:0004852,8.47e-41,18;UBERON:0000487,4.16e-33,22;UBERON:0003915,6.70e-30,9;UBERON:0004700,6.70e-30,9;UBERON:0001917,6.70e-30,9;UBERON:0006914,5.96e-29,25;UBERON:0000055,1.48e-22,68;UBERON:0004535,7.82e-22,109;UBERON:0001009,3.71e-21,112;UBERON:0002049,2.58e-19,78;UBERON:0007798,2.58e-19,78;UBERON:0001473,1.18e-15,8;UBERON:0004536,1.18e-15,8;UBERON:0006558,1.18e-15,8;UBERON:0007500,8.10e-14,59;UBERON:0001981,8.10e-14,59;UBERON:0004537,8.10e-14,59;UBERON:0006965,8.10e-14,59;UBERON:0002465,1.45e-12,10;UBERON:0010523,2.51e-11,3;UBERON:0001915,2.51e-11,3;UBERON:0001982,2.51e-11,3;UBERON:0004872,3.76e-11,83;UBERON:0002084,5.75e-09,1;UBERON:0002082,5.75e-09,1;UBERON:0010226,5.75e-09,1;UBERON:0003914,2.62e-07,117;UBERON:0004111,5.07e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,0,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0.668462741311041,0.294605907474837,0,0,0,0,0.164437904603676,0,0.579606171470105,0,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,1.04142150482278,1.13061588384802,2.51699661725944,1.37559020970034,1.25396979922086,0.258416759169329,0,2.34304428935269,1.20848795132744,4.56163263431108,0.976248230192678,0.367663080345869,1.62028389576352,0.267899184852239,0,0.225222960966644,1.53316637465883,0,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,2.31492756288305,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850468526382578,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.512900250232778,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0.569647187174163,0.714695326373367,1.23408681925858,0,1.08006287447623,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,2.79129200023881,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0.617819694732514,0.522109747527277,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57218385698286,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,2.13440553948281,0,0,0.146552233678082,0,0,0,0,0,2.0289608387862,0.78602152549833,0,0.992332043623902,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.122026264901963,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0,0,5.81207126840626,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,4.04328308643733,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.381882949668989,0,0.435433495793923,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:101705165..101705181,+ | |||
}} |
Revision as of 19:50, 10 January 2014
Short description: | p@chr1:101705165..101705181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:101705165..101705181, + |
Coexpression cluster: | C3839_hairy_rhabdomyosarcoma_Lymphatic_Endothelial_small_leukemia_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.54e-60 | 24 |
endothelial cell | 5.39e-45 | 36 |
blood vessel endothelial cell | 8.47e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.47e-41 | 18 |
meso-epithelial cell | 1.82e-35 | 45 |
endothelial cell of artery | 6.70e-30 | 9 |
lining cell | 6.49e-27 | 58 |
barrier cell | 6.49e-27 | 58 |
lymphangioblast | 8.67e-21 | 6 |
endothelial cell of lymphatic vessel | 8.67e-21 | 6 |
vascular lymphangioblast | 8.67e-21 | 6 |
aortic endothelial cell | 7.83e-12 | 6 |
mesodermal cell | 1.79e-11 | 121 |
capillary endothelial cell | 2.51e-11 | 3 |
squamous epithelial cell | 1.56e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.47e-41 | 18 |
endothelium | 8.47e-41 | 18 |
cardiovascular system endothelium | 8.47e-41 | 18 |
simple squamous epithelium | 4.16e-33 | 22 |
endothelial tube | 6.70e-30 | 9 |
arterial system endothelium | 6.70e-30 | 9 |
endothelium of artery | 6.70e-30 | 9 |
squamous epithelium | 5.96e-29 | 25 |
vessel | 1.48e-22 | 68 |
cardiovascular system | 7.82e-22 | 109 |
circulatory system | 3.71e-21 | 112 |
vasculature | 2.58e-19 | 78 |
vascular system | 2.58e-19 | 78 |
lymphatic vessel | 1.18e-15 | 8 |
lymph vasculature | 1.18e-15 | 8 |
lymphatic part of lymphoid system | 1.18e-15 | 8 |
epithelial tube open at both ends | 8.10e-14 | 59 |
blood vessel | 8.10e-14 | 59 |
blood vasculature | 8.10e-14 | 59 |
vascular cord | 8.10e-14 | 59 |
lymphoid system | 1.45e-12 | 10 |
microcirculatory vessel | 2.51e-11 | 3 |
endothelium of capillary | 2.51e-11 | 3 |
capillary | 2.51e-11 | 3 |
splanchnic layer of lateral plate mesoderm | 3.76e-11 | 83 |
heart left ventricle | 5.75e-09 | 1 |
cardiac ventricle | 5.75e-09 | 1 |
future cardiac ventricle | 5.75e-09 | 1 |
epithelial tube | 2.62e-07 | 117 |
anatomical conduit | 5.07e-07 | 240 |