FFCP PHASE1:Hg19::chr1:116311404..116311413,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |||
|TSSclassifier=strong | |||
|UniProt=O14958 | |||
|association_with_transcript=-2bp_to_ENST00000261448_5end | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_5_at_CASQ2_5end | |||
|id=chr1:116311404..116311413,- | |||
|ontology_enrichment_celltype=CL:0000188!2.83e-14!9;CL:0000594!1.15e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.63e-09;65!UBERON:0010226;3.31e-09;1!UBERON:0010227;3.58e-09;1!UBERON:0004140;4.52e-09;1!UBERON:0000358;6.65e-09;1!UBERON:0009143;1.65e-08;1!UBERON:0004874;1.65e-08;1!UBERON:0005062;1.65e-08;4!UBERON:0007284;1.65e-08;4 | |||
|ontology_enrichment_disease=DOID:114!2.57e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.95e-16;2!DOID:178;6.65e-09;1!DOID:326;6.65e-09;1!DOID:3978;6.65e-09;1!DOID:3394;6.65e-09;1!DOID:5844;6.65e-09;1!DOID:1287;1.42e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.95e-16,2;DOID:178,6.65e-09,1;DOID:326,6.65e-09,1;DOID:3978,6.65e-09,1;DOID:3394,6.65e-09,1;DOID:5844,6.65e-09,1;DOID:1287,1.42e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-39!115;UBERON:0003103!5.14e-08!69;UBERON:0000481!4.07e-07!347;UBERON:0000341!4.65e-07!2;UBERON:0001630!6.60e-07!2;UBERON:0005090!6.60e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.72e-18;25!UBERON:0000341;1.43e-15;2!UBERON:0001134;1.61e-11;16!UBERON:0002036;1.61e-11;16!UBERON:0004151;2.07e-11;3!UBERON:0003978;4.66e-11;3!UBERON:0000946;4.66e-11;3!UBERON:0002084;3.31e-09;1!UBERON:0002082;3.31e-09;1!UBERON:0002079;3.58e-09;1!UBERON:0002146;5.28e-09;1!UBERON:0005623;5.28e-09;1!UBERON:0002135;7.75e-09;1!UBERON:0007029;1.05e-08;1!UBERON:0002426;1.05e-08;1!UBERON:0003831;1.05e-08;1!UBERON:0003898;1.05e-08;1!UBERON:0004830;1.05e-08;1!UBERON:0003830;1.05e-08;1!UBERON:0005175;1.05e-08;1!UBERON:0001774;1.05e-08;1!UBERON:0001103;1.05e-08;1!UBERON:0000948;1.41e-08;22!UBERON:0000989;1.65e-08;1!UBERON:0008811;1.65e-08;1!UBERON:0002385;2.88e-08;31!UBERON:0001015;2.88e-08;31!UBERON:0000383;2.88e-08;31!UBERON:0000922;6.92e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.96e-17,27;UBERON:0000341,1.33e-15,2;UBERON:0007023,6.91e-12,114;UBERON:0004151,2.07e-11,3;UBERON:0003978,4.66e-11,3;UBERON:0009751,4.66e-11,3;UBERON:0000946,4.66e-11,3;UBERON:0002523,4.66e-11,3;UBERON:0005983,4.66e-11,3;UBERON:0002165,4.66e-11,3;UBERON:0002062,4.66e-11,3;UBERON:0007280,4.66e-11,3;UBERON:0003103,1.57e-09,68;UBERON:0002084,3.31e-09,1;UBERON:0002082,3.31e-09,1;UBERON:0010226,3.31e-09,1;UBERON:0002079,3.58e-09,1;UBERON:0002146,5.28e-09,1;UBERON:0005623,5.28e-09,1;UBERON:0002135,7.75e-09,1;UBERON:0007029,9.74e-09,1;UBERON:0002426,1.05e-08,1;UBERON:0003831,1.05e-08,1;UBERON:0003898,1.05e-08,1;UBERON:0004830,1.05e-08,1;UBERON:0003830,1.05e-08,1;UBERON:0005175,1.05e-08,1;UBERON:0001774,1.05e-08,1;UBERON:0001103,1.05e-08,1;UBERON:0010084,1.05e-08,1;UBERON:0000989,1.22e-08,1;UBERON:0008811,1.22e-08,1;UBERON:0006258,1.22e-08,1;UBERON:0005876,1.22e-08,1;UBERON:0004874,1.22e-08,1;UBERON:0000948,7.79e-08,24;UBERON:0005498,7.79e-08,24;UBERON:0004140,7.79e-08,24;UBERON:0009881,7.79e-08,24;UBERON:0004141,7.79e-08,24;UBERON:0003084,7.79e-08,24;UBERON:0007005,7.79e-08,24;UBERON:0004139,7.79e-08,24;UBERON:0004291,7.79e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0.460511024178389,0.551346289938122,0.107420244868274,0.290033387828457,1.02271952899321,16.3818945589997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0,0,0,0,4.14302303675121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0.134802265961354,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,1.74580229679155,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.98206003180636,10.9997003525608,0,7.18844401796368,11.1598772515508,8.70368684023303,11.0180894878231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,20.7261644648276,21.8490350220592,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,1.96232732126285,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,1.95059333026869,22.0364741954258,2.4285549652957,0,0,0,0,0,0,0.463044948647668,0,0,11.2768228006797,0,0.196308467114945,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0,1.91910583710883,3.09483760902862,0,0,0,0.12729431655633,0.202117188958219,0.217716747896961,7.52913262387618,0.26940821205835,0.573777643141411,0.99798106963804,0,0,0,0,7.03922827210363,0.366724332548599,0,0,0.201273793591026,0 | |||
|short_description=p5@CASQ2 | |||
}} |
Revision as of 20:19, 10 January 2014
Short description: | p5@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CASQ2_5end |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | -2bp_to_ENST00000261448_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | O14958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.95e-16 | 2 |
vascular disease | 6.65e-09 | 1 |
ischemia | 6.65e-09 | 1 |
extrinsic cardiomyopathy | 6.65e-09 | 1 |
myocardial ischemia | 6.65e-09 | 1 |
myocardial infarction | 6.65e-09 | 1 |
cardiovascular system disease | 1.42e-08 | 4 |