FFCP PHASE1:Hg19::chr1:152943122..152943128,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=163778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23173 | |||
|TSSclassifier=not | |||
|UniProt=Q96PI1 | |||
|association_with_transcript=0bp_to_NM_173080,uc001fav.1_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_SPRR4_5end | |||
|id=chr1:152943122..152943128,+ | |||
|ontology_enrichment_celltype=CL:0000622!7.91e-25!5;CL:0000154!1.17e-20!6;CL:0002159!3.79e-18!13;CL:0002251!4.93e-17!21;CL:0000362!1.04e-15!8;CL:0002621!1.39e-15!3;CL:0002623!1.96e-15!3;CL:0000150!1.08e-13!9;CL:0000240!2.46e-13!6;CL:0000311!2.46e-13!6;CL:0000079!2.46e-13!6;CL:0000237!2.46e-13!6;CL:0000036!2.46e-13!6;CL:0000357!2.46e-13!6;CL:0000114!2.46e-13!6;CL:0000317!3.68e-11!2;CL:1000448!3.68e-11!2;CL:0002308!3.68e-11!2;CL:0002140!3.68e-11!2;CL:0002077!1.24e-10!33;CL:0000312!1.03e-09!5;CL:0002076!2.66e-09!43;CL:0002166!1.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000622;8.74e-40;5!CL:0000154;3.10e-33;6!CL:0000317;1.35e-25;2!CL:1000448;1.35e-25;2!CL:0002308;1.35e-25;2!CL:0002140;1.35e-25;2!CL:0000362;1.77e-22;9!CL:0000150;2.69e-22;9!CL:0002159;3.44e-22;14!CL:0002623;1.33e-17;3!CL:0002621;2.03e-17;3!CL:0000312;4.12e-11;5!CL:0002251;3.38e-10;20!CL:0000240;2.07e-09;6!CL:0000311;2.07e-09;6!CL:0000079;2.07e-09;6!CL:0000237;2.07e-09;6!CL:0002077;4.71e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,9.66e-40,5;CL:0000154,3.37e-33,6;CL:0000317,1.27e-25,2;CL:1000448,1.27e-25,2;CL:0002308,1.27e-25,2;CL:0002140,1.27e-25,2;CL:0000362,1.73e-22,9;CL:0000150,2.84e-22,9;CL:0002159,3.30e-22,14;CL:0002623,1.51e-17,3;CL:0002621,2.11e-17,3;CL:0000312,4.12e-11,5;CL:0002251,3.55e-10,20;CL:0000240,2.07e-09,6;CL:0000311,2.07e-09,6;CL:0000079,2.07e-09,6;CL:0000237,2.07e-09,6;CL:0000036,2.07e-09,6;CL:0000357,2.07e-09,6;CL:0000114,2.07e-09,6;CL:0002077,3.93e-09,34 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.98e-14;1!CL:0000357;2.07e-09;6!CL:0000114;2.07e-09;6!UBERON:0008814;1.54e-07;2!UBERON:0010056;1.54e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;6.65e-14;1!DOID:3149;6.65e-14;1!DOID:178;1.72e-13;1!DOID:326;1.72e-13;1!DOID:3978;1.72e-13;1!DOID:3394;1.72e-13;1!DOID:5844;1.72e-13;1!DOID:3451;1.36e-07;2!DOID:4159;1.36e-07;2!DOID:0060122;1.36e-07;2!DOID:114;2.18e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.55e-14,1;DOID:3149,7.55e-14,1;DOID:178,1.83e-13,1;DOID:326,1.83e-13,1;DOID:3978,1.83e-13,1;DOID:3394,1.83e-13,1;DOID:5844,1.83e-13,1;DOID:3451,1.45e-07,2;DOID:4159,1.45e-07,2;DOID:0060122,1.45e-07,2;DOID:114,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.51e-21!21;UBERON:0000165!1.44e-18!28;UBERON:0000930!1.44e-18!28;UBERON:0001949!1.39e-15!3;UBERON:0003102!3.45e-14!95;UBERON:0001003!1.40e-12!14;UBERON:0007376!1.40e-12!14;UBERON:0007383!1.40e-12!14;UBERON:0000161!5.90e-12!35;UBERON:0003408!6.90e-12!10;UBERON:0001042!1.26e-11!10;UBERON:0009145!1.26e-11!10;UBERON:0002419!3.68e-11!2;UBERON:0007771!3.68e-11!2;UBERON:0003297!3.68e-11!2;UBERON:0001821!3.68e-11!2;UBERON:0003487!3.68e-11!2;UBERON:0001820!3.68e-11!2;UBERON:0005089!3.68e-11!2;UBERON:0005088!3.68e-11!2;UBERON:0006562!1.51e-10!11;UBERON:0001004!4.56e-10!72;UBERON:0001444!6.18e-10!48;UBERON:0000078!3.95e-09!18;UBERON:0001044!6.05e-08!6;UBERON:0003293!6.05e-08!6;UBERON:0003294!6.05e-08!6;UBERON:0010047!6.05e-08!6;UBERON:0000167!6.05e-08!6;UBERON:0004119!1.47e-07!169;UBERON:0000925!1.47e-07!169;UBERON:0006595!1.47e-07!169;UBERON:0001723!1.93e-07!3;UBERON:0001033!1.93e-07!3;UBERON:0010056!1.93e-07!3;UBERON:0002097!8.35e-07!40;UBERON:0001007!9.83e-07!155;UBERON:0001555!9.83e-07!155;UBERON:0007026!9.83e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.35e-25;2!UBERON:0007771;1.35e-25;2!UBERON:0003297;1.35e-25;2!UBERON:0001821;1.35e-25;2!UBERON:0003487;1.35e-25;2!UBERON:0001820;1.35e-25;2!UBERON:0001003;6.66e-21;15!UBERON:0007376;6.66e-21;15!UBERON:0010371;2.59e-19;31!UBERON:0001949;2.03e-17;3!UBERON:0007029;3.08e-14;1!UBERON:0002426;6.65e-14;1!UBERON:0003831;6.65e-14;1!UBERON:0003898;6.65e-14;1!UBERON:0004830;6.65e-14;1!UBERON:0003830;6.65e-14;1!UBERON:0005175;6.65e-14;1!UBERON:0001774;6.65e-14;1!UBERON:0001103;6.65e-14;1!UBERON:0000014;1.11e-13;4!UBERON:0000165;4.77e-11;28!UBERON:0000161;1.01e-10;19!UBERON:0000166;1.01e-10;19!UBERON:0000486;8.26e-10;12!UBERON:0002097;1.01e-09;41!UBERON:0002199;2.58e-09;46!UBERON:0002416;2.58e-09;46!UBERON:0001044;2.84e-09;6!UBERON:0003293;2.84e-09;6!UBERON:0003294;2.84e-09;6!UBERON:0010047;2.84e-09;6!UBERON:0003408;2.84e-09;6!UBERON:0000167;2.84e-09;6!UBERON:0003929;5.37e-08;7!UBERON:0005090;1.36e-07;2!UBERON:0001630;1.36e-07;2!UBERON:0003350;4.21e-07;8!UBERON:0001828;4.21e-07;8!UBERON:0002365;7.29e-07;31!UBERON:0002330;7.29e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.27e-25,2;UBERON:0007771,1.27e-25,2;UBERON:0003297,1.27e-25,2;UBERON:0001821,1.27e-25,2;UBERON:0003487,1.27e-25,2;UBERON:0001820,1.27e-25,2;UBERON:0005089,1.27e-25,2;UBERON:0005088,1.27e-25,2;UBERON:0001003,6.53e-21,15;UBERON:0007376,6.53e-21,15;UBERON:0007383,6.53e-21,15;UBERON:0001949,2.11e-17,3;UBERON:0003102,1.26e-16,99;UBERON:0007029,3.08e-14,1;UBERON:0000166,4.79e-14,22;UBERON:0002426,5.85e-14,1;UBERON:0003831,5.85e-14,1;UBERON:0003898,5.85e-14,1;UBERON:0004830,5.85e-14,1;UBERON:0003830,5.85e-14,1;UBERON:0005175,5.85e-14,1;UBERON:0001774,5.85e-14,1;UBERON:0001103,5.85e-14,1;UBERON:0010084,5.85e-14,1;UBERON:0000014,1.18e-13,4;UBERON:0002097,1.03e-10,41;UBERON:0000165,1.20e-10,29;UBERON:0000930,1.20e-10,29;UBERON:0002199,1.65e-09,46;UBERON:0002416,1.65e-09,46;UBERON:0001044,3.02e-09,6;UBERON:0003293,3.02e-09,6;UBERON:0003294,3.02e-09,6;UBERON:0010047,3.02e-09,6;UBERON:0000167,3.02e-09,6;UBERON:0000161,1.46e-08,36;UBERON:0000033,1.24e-07,56;UBERON:0005090,1.28e-07,2;UBERON:0001630,1.28e-07,2;UBERON:0003350,4.28e-07,8;UBERON:0001828,4.28e-07,8;UBERON:0000153,7.42e-07,62;UBERON:0007811,7.42e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,5.45492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1945291116798,21.3563331189477,0.603173834469785,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.708875486211932,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,8.45078319847478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,8.82835412028668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05043250238239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,1.53646629384555,167.28483815901,0,0,0,0,0,0,0,0,0,0,0,0,0,541.567757260941,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452122368852043,0.186224142887574,0,0,0,6.7492191848058,0.342233301085281,0.134704106029175,0,0,0,0,0,0,35.1961413605181,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p1@SPRR4 | |||
}} |
Revision as of 20:56, 10 January 2014
Short description: | p1@SPRR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SPRR4_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_NM_173080, uc001fav.1_5end |
EntrezGene: | SPRR4 |
HGNC: | 23173 |
UniProt: | Q96PI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 9.66e-40 | 5 |
protein secreting cell | 3.37e-33 | 6 |
sebum secreting cell | 1.27e-25 | 2 |
epithelial cell of sweat gland | 1.27e-25 | 2 |
epithelial cell of skin gland | 1.27e-25 | 2 |
acinar cell of sebaceous gland | 1.27e-25 | 2 |
epidermal cell | 1.73e-22 | 9 |
glandular epithelial cell | 2.84e-22 | 9 |
general ecto-epithelial cell | 3.30e-22 | 14 |
acinar cell of salivary gland | 1.51e-17 | 3 |
gingival epithelial cell | 2.11e-17 | 3 |
keratinocyte | 4.12e-11 | 5 |
epithelial cell of alimentary canal | 3.55e-10 | 20 |
stratified squamous epithelial cell | 2.07e-09 | 6 |
keratin accumulating cell | 2.07e-09 | 6 |
stratified epithelial cell | 2.07e-09 | 6 |
keratinizing barrier epithelial cell | 2.07e-09 | 6 |
epithelial fate stem cell | 2.07e-09 | 6 |
stratified epithelial stem cell | 2.07e-09 | 6 |
surface ectodermal cell | 2.07e-09 | 6 |
ecto-epithelial cell | 3.93e-09 | 34 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.55e-14 | 1 |
keratoacanthoma | 7.55e-14 | 1 |
vascular disease | 1.83e-13 | 1 |
ischemia | 1.83e-13 | 1 |
extrinsic cardiomyopathy | 1.83e-13 | 1 |
myocardial ischemia | 1.83e-13 | 1 |
myocardial infarction | 1.83e-13 | 1 |
skin carcinoma | 1.45e-07 | 2 |
skin cancer | 1.45e-07 | 2 |
integumentary system cancer | 1.45e-07 | 2 |
heart disease | 2.25e-07 | 2 |