FFCP PHASE1:Hg19::chr1:172224446..172224459,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_at_chr1:172224446..172224459,+ | |||
|id=chr1:172224446..172224459,+ | |||
|ontology_enrichment_celltype=CL:0000133!2.15e-08!59;CL:0002319!4.92e-08!25;CL:0000128!2.01e-07!7;CL:0000126!2.01e-07!7;CL:0000127!2.01e-07!7;CL:0002453!2.01e-07!7;CL:0002605!2.07e-07!3;CL:0000064!2.16e-07!3;CL:0005012!2.16e-07!3;CL:0000067!2.16e-07!3;CL:0002304!2.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.77e-22;3!CL:0000067;3.77e-22;3!CL:0005012;3.77e-22;3!CL:0002304;3.77e-22;3!CL:0002605;5.00e-22;3!CL:0002319;1.74e-19;25!CL:0000128;2.51e-16;7!CL:0000126;2.51e-16;7!CL:0000127;2.51e-16;7!CL:0000047;4.78e-15;2!CL:0000540;6.68e-11;6!CL:0000404;6.68e-11;6!CL:0002580;5.42e-10;3!CL:0000222;4.10e-08;1!CL:0000243;8.55e-07;15!CL:0000125;8.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.05e-22,3;CL:0000064,3.52e-22,3;CL:0000067,3.52e-22,3;CL:0005012,3.52e-22,3;CL:0002304,3.52e-22,3;CL:0000047,1.18e-21,8;CL:0002319,1.14e-19,25;CL:0000133,5.07e-17,59;CL:0000128,1.56e-16,7;CL:0000126,1.56e-16,7;CL:0000127,1.56e-16,7;CL:0002453,1.56e-16,7;CL:0000221,1.35e-13,72;CL:0000540,5.09e-11,6;CL:0000031,5.09e-11,6;CL:0000404,5.09e-11,6;CL:0002580,3.58e-10,3;CL:0000243,7.10e-07,15;CL:0000125,7.10e-07,15;CL:0000030,7.10e-07,15;CL:0000339,7.10e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000031;6.68e-11;6!CL:0000133;7.10e-11;59!CL:0000339;8.55e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!2.16e-07!3;UBERON:0001775!2.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;3.77e-22;3!UBERON:0001775;3.77e-22;3!UBERON:0000488;9.22e-17;4!UBERON:0002203;2.38e-11;6!UBERON:0001768;2.38e-11;6!UBERON:0002200;2.38e-11;6!UBERON:0007625;1.31e-10;11!UBERON:0006876;1.72e-10;11!UBERON:0001801;2.34e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.52e-22,3;UBERON:0001775,3.52e-22,3;UBERON:0000488,8.76e-17,4;UBERON:0002203,2.30e-11,6;UBERON:0001768,2.30e-11,6;UBERON:0002200,2.30e-11,6;UBERON:0007625,1.25e-10,11;UBERON:0006876,1.95e-10,11;UBERON:0001801,2.25e-08,14;UBERON:0001017,9.96e-07,81 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0.313454721478088,6.86966369114536,1.77936752594749,6.77930253811935,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.905718941022,3.89307896242109,3.40325341790644,2.66075276955077,3.24988707064566,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,2.19409231913646,1.26668106709558,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,1.54241239054985,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31960861178188,1.30139853857622,2.31986643833309,1.34013012267479,1.91381625495949,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,1.73675465473144,1.53461973288062,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,1.15523005656622,0.784349769176855,0,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,2.00675909541941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979352392114111,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63629892003448,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0,0.0870592065804026,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0.76280561296425,0,0,0,2.39460383124975,0,1.36310417428337,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,0.454947352624943,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0.406870733204662,0.181848659202559,0,0,0,0,1.37358282073117,1.01024846629776,1.26184898228651,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0.951360726220549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:172224446..172224459,+ | |||
}} |
Revision as of 22:18, 10 January 2014
Short description: | p@chr1:172224446..172224459, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:172224446..172224459, + |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.05e-22 | 3 |
ciliated cell | 3.52e-22 | 3 |
ciliated epithelial cell | 3.52e-22 | 3 |
multi-ciliated epithelial cell | 3.52e-22 | 3 |
non-pigmented ciliary epithelial cell | 3.52e-22 | 3 |
neuronal stem cell | 1.18e-21 | 8 |
neural cell | 1.14e-19 | 25 |
neurectodermal cell | 5.07e-17 | 59 |
oligodendrocyte | 1.56e-16 | 7 |
macroglial cell | 1.56e-16 | 7 |
astrocyte | 1.56e-16 | 7 |
oligodendrocyte precursor cell | 1.56e-16 | 7 |
ectodermal cell | 1.35e-13 | 72 |
neuron | 5.09e-11 | 6 |
neuroblast | 5.09e-11 | 6 |
electrically signaling cell | 5.09e-11 | 6 |
preadipocyte of the breast | 3.58e-10 | 3 |
glial cell (sensu Vertebrata) | 7.10e-07 | 15 |
glial cell | 7.10e-07 | 15 |
glioblast | 7.10e-07 | 15 |
glioblast (sensu Vertebrata) | 7.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.52e-22 | 3 |
ciliary body | 3.52e-22 | 3 |
atypical epithelium | 8.76e-17 | 4 |
vasculature of eye | 2.30e-11 | 6 |
uvea | 2.30e-11 | 6 |
vasculature of head | 2.30e-11 | 6 |
pigment epithelium of eye | 1.25e-10 | 11 |
vasculature of organ | 1.95e-10 | 11 |
anterior segment of eyeball | 2.25e-08 | 14 |
central nervous system | 9.96e-07 | 81 |