FFCP PHASE1:Hg19::chr10:79471157..79471172,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C507 | |||
|description=CAGE_peak_at_chr10:79471157..79471172,- | |||
|id=chr10:79471157..79471172,- | |||
|ontology_enrichment_celltype=CL:0002536!2.07e-07!2;CL:0000945!2.24e-07!24;CL:0000826!2.24e-07!24;CL:0000785!2.74e-07!2;CL:0000955!2.74e-07!2;CL:0000818!2.74e-07!2;CL:0000954!2.74e-07!2;CL:0000816!2.74e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.63e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.25e-09,52;CL:0000542,1.89e-09,53;CL:0000051,1.89e-09,53;CL:0000945,5.63e-08,24;CL:0000826,5.63e-08,24;CL:0000988,9.98e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.64e-15!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.30e-21;1!DOID:0060061;2.30e-21;1!DOID:8691;2.30e-21;1!DOID:0060058;4.94e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.82e-21,1;DOID:0060061,2.82e-21,1;DOID:8691,2.82e-21,1;DOID:0060058,5.15e-09,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.53e-18;10!UBERON:0000178;1.35e-12;15!UBERON:0000179;1.35e-12;15!UBERON:0000463;1.35e-12;15!UBERON:0002390;3.79e-10;32!UBERON:0000478;4.20e-08;24!UBERON:0002106;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.63e-18,10;UBERON:0000358,1.63e-18,10;UBERON:0000307,1.63e-18,10;UBERON:0000091,1.63e-18,10;UBERON:0000087,1.63e-18,10;UBERON:0007010,1.63e-18,10;UBERON:0007806,1.63e-18,10;UBERON:0008780,1.63e-18,10;UBERON:0005728,1.63e-18,10;UBERON:0000178,1.41e-12,15;UBERON:0000179,1.41e-12,15;UBERON:0000463,1.41e-12,15;UBERON:0000478,4.31e-08,24;UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,2.36881557818649,1.55991119954897,1.8890587515283,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0.492339221844278,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,3.21266241260907,3.55034628318548,0,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19973531295353,0,0,0,0,0,0,0,0,3.77438260454151,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.29452750101839,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr10:79471157..79471172,- | |||
}} |
Revision as of 03:38, 11 January 2014
Short description: | p@chr10:79471157..79471172, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79471157..79471172, - |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.25e-09 | 52 |
lymphocyte | 1.89e-09 | 53 |
common lymphoid progenitor | 1.89e-09 | 53 |
lymphocyte of B lineage | 5.63e-08 | 24 |
pro-B cell | 5.63e-08 | 24 |
hematopoietic cell | 9.98e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.63e-18 | 10 |
blastocyst | 1.63e-18 | 10 |
blastula | 1.63e-18 | 10 |
bilaminar disc | 1.63e-18 | 10 |
inner cell mass | 1.63e-18 | 10 |
cleaving embryo | 1.63e-18 | 10 |
connecting stalk | 1.63e-18 | 10 |
inner cell mass derived epiblast | 1.63e-18 | 10 |
extraembryonic mesoderm | 1.63e-18 | 10 |
blood | 1.41e-12 | 15 |
haemolymphatic fluid | 1.41e-12 | 15 |
organism substance | 1.41e-12 | 15 |
extraembryonic structure | 4.31e-08 | 24 |
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.82e-21 | 1 |
cutaneous T cell lymphoma | 2.82e-21 | 1 |
mycosis fungoides | 2.82e-21 | 1 |
lymphoma | 5.15e-09 | 10 |