FFCP PHASE1:Hg19::chr10:99446903..99446914,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60370 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30898 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T686 | |||
|association_with_transcript=100bp_to_NM_021732,uc001koi.2_5end | |||
|description=CAGE_peak_5_at_AVPI1_5end | |||
|id=chr10:99446903..99446914,- | |||
|ontology_enrichment_celltype=CL:0000066!9.11e-15!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.53e-14,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.48e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.14e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.18e-12!169;UBERON:0000925!5.18e-12!169;UBERON:0006595!5.18e-12!169;UBERON:0001007!8.17e-09!155;UBERON:0001555!8.17e-09!155;UBERON:0007026!8.17e-09!155;UBERON:0001004!2.00e-08!72;UBERON:0000077!3.77e-08!130;UBERON:0001737!7.55e-08!9;UBERON:0003102!1.19e-07!95;UBERON:0003104!1.97e-07!238;UBERON:0009142!1.97e-07!238;UBERON:0008947!5.14e-07!38;UBERON:0003258!5.14e-07!38;UBERON:0000481!5.92e-07!347;UBERON:0004921!6.47e-07!129;UBERON:0004185!6.47e-07!129;UBERON:0000062!7.62e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.55e-11;9!UBERON:0001557;1.55e-11;9!UBERON:0000072;4.44e-09;37!UBERON:0000065;1.18e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.13e-13,160;UBERON:0000925,3.13e-13,160;UBERON:0006595,3.13e-13,160;UBERON:0001737,1.75e-11,9;UBERON:0001004,4.15e-10,74;UBERON:0001007,3.58e-09,145;UBERON:0001555,3.58e-09,145;UBERON:0007026,3.58e-09,145;UBERON:0008947,1.28e-08,38;UBERON:0003258,1.28e-08,38;UBERON:0001041,1.37e-08,87;UBERON:0000072,2.14e-08,47;UBERON:0000065,4.28e-08,54;UBERON:0004921,6.92e-08,118 | |||
|phase1_expression=0.54503513781167,0,1.12763523276777,2.00146596706261,1.34088328328186,3.48935409640147,0,0,0.783556884599516,0.737201809504527,6.28021051175185,0.436882744260345,0.263766978228454,1.60896258848061,2.65117900582333,2.01697543935533,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0.786728553697808,0,1.08371286321253,1.83884244895785,1.8072355126695,1.47901604066715,0,0,0,0.553995408531877,0,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0,0.464858073811369,0,1.23882548358041,0.28769239232215,0,0.236482229888585,0,0.645484683583826,1.35426486594342,0.941211697713023,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0.422510572623884,0,0.209658645508376,0.336985893439485,0.300353785683013,0,0,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00803371612366,0.802320587350522,0.289648807765598,0,0,0.255725123687061,0.722878304769133,1.00267582127178,2.462390822334,0,1.94653948121054,0.0945348171640679,0.443458794925128,0.263504357079378,0.916853528483988,4.00724817121796,2.59549109949101,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0.183201743930407,0,0,3.92484646928281,2.98183171017191,0.379891534993739,1.19168262731897,1.72101972449288,0,1.12135520028461,0,0.74000264525148,0.311211035399766,0.134710672069688,0,0.151357427644931,0,1.64025002283658,1.5608003841516,1.71141546463335,0.747243402759005,0.117434498643765,0.161872944368132,0,0.816616685019573,0.491337269247072,1.13658359293342,4.75201142912821,1.48360157567134,0.910161361938026,3.59309070908119,0,0,0.277064115484183,1.31693286264251,0.30648779579902,1.95309476578576,0.340296549480063,0.717558542755448,0.85422955527427,0.635795703478686,0,0.618315175430633,1.8034837803194,1.30281799432113,1.35021065793013,0.487185025805993,0.504867548488229,0.460249493211497,0.646584227275248,0.355009592516614,0.201504196455281,1.52604533079439,0.193260853163297,0.545492241181669,1.14721838155602,0.365921118388786,0.132529768321485,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0.928735856063958,1.44375896333917,6.98010120235079,8.76640388406129,6.7483088367375,8.05146000946476,8.49729831960384,7.82993043066619,8.08987848960986,7.2601942096378,8.84918460976698,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.614942192715568,0.514703430895577,0.878002283269004,2.24803506515239,1.10581869652794,1.29623823221941,3.9096996637239,3.11980435583874,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,2.37061319387782,2.57545848628462,0,0,0,2.81201501960331,0.839910640994298,1.41775097242386,1.61205340865127,2.03443756959773,1.91691339582606,0,0,0.207328115540772,0.576479813667846,0.25248486685276,0.380987365753014,4.96584953225761,5.86087236050235,0,0.822619941626588,3.90445975197093,0.571652865261156,0.112131084345361,0,0,1.80980402060889,10.7296933755565,0.845302752556,0.797814349754612,3.12022310734098,0.514414748524284,2.83698264046557,0.266422179016099,0.428933980974443,3.25572963234866,0,0,0,1.58390374586686,0.602878754119172,2.61460037580088,0.699810938274399,0,0,0,0.958499421966331,1.14861935834114,1.42636905040718,0.289562613335158,1.43833425785268,0.358121926479791,0,0.985153801009636,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,0.542530047399471,1.66376689224646,1.96271887676878,2.36553622550902,1.52283839490527,1.20378439891088,9.09630016223939,2.0694614258501,1.99267679560631,0.553107505625109,0.868836144680828,0.391602314925481,0.343143423810856,0.413536052245775,0.215714200818617,0.640365346820666,7.88131685760275,1.66435439510497,1.5119514666484,1.73675465473144,1.68808170616869,0.841980283299221,2.05022638809122,1.53512174720011,1.28683136914886,4.45254199334973,0,0.177561725313127,0.328508624055237,2.07701771673448,0.348631135379878,0.604297247958111,2.80709058424599,1.56537681191024,1.60740227430449,1.63882051206045,4.45823010862042,0,0.15403067420883,1.56869953835371,1.46139224653261,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0.831076008928724,0.447749509444357,0,0,0.769350375349168,1.31205858279882,1.30151357865721,0.618246069886334,0,0,2.87132768998086,0.650060246036521,0,0.290012154876366,0.462145851343933,0.307007349452259,0.413509717453592,0.537101224341368,0.435050081742686,0.426133137080504,0,1.32227932288782,1.53752053892085,0.255225424989168,0.708104465988849,0.464845549297286,1.88887408098384,0,0.616067160352178,1.06461206063404,0.869932992075073,0.55597265731176,0.286249773483982,0,0.949138274156178,2.09693213316207,2.303080121802,2.56763392820352,0.95460974377781,0,0.539617372749944,0,0.706874414074119,0.60654744471994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| |||
|short_description=p5@AVPI1 | |||
}} |
Revision as of 04:26, 11 January 2014
Short description: | p5@AVPI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AVPI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_NM_021732, uc001koi.2_5end |
EntrezGene: | AVPI1 |
HGNC: | 30898 |
UniProt: | Q5T686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.53e-14 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.13e-13 | 160 |
endoderm | 3.13e-13 | 160 |
presumptive endoderm | 3.13e-13 | 160 |
larynx | 1.75e-11 | 9 |
respiratory system | 4.15e-10 | 74 |
digestive system | 3.58e-09 | 145 |
digestive tract | 3.58e-09 | 145 |
primitive gut | 3.58e-09 | 145 |
respiratory primordium | 1.28e-08 | 38 |
endoderm of foregut | 1.28e-08 | 38 |
foregut | 1.37e-08 | 87 |
segment of respiratory tract | 2.14e-08 | 47 |
respiratory tract | 4.28e-08 | 54 |
subdivision of digestive tract | 6.92e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.14e-08 | 106 |