FFCP PHASE1:Hg19::chr10:135192782..135192805,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20837 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000356306,ENST00000476834,ENST00000480071,ENST00000483211,ENST00000529585_5end | |||
|description=CAGE_peak_2_at_PAOX_5end | |||
|id=chr10:135192782..135192805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.93e-12!86;UBERON:0001017!2.09e-12!82;UBERON:0001049!2.26e-12!57;UBERON:0005068!2.26e-12!57;UBERON:0006241!2.26e-12!57;UBERON:0007135!2.26e-12!57;UBERON:0007023!2.44e-12!115;UBERON:0000480!3.56e-12!626;UBERON:0000033!6.68e-12!123;UBERON:0000467!7.47e-12!625;UBERON:0000153!1.61e-11!129;UBERON:0007811!1.61e-11!129;UBERON:0002616!2.11e-11!59;UBERON:0000073!7.00e-11!94;UBERON:0001016!7.00e-11!94;UBERON:0003075!1.11e-10!86;UBERON:0007284!1.11e-10!86;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0003056!2.37e-10!61;UBERON:0000468!3.50e-10!659;UBERON:0000475!7.30e-10!365;UBERON:0003080!1.45e-09!42;UBERON:0001893!1.90e-09!34;UBERON:0002780!3.42e-09!41;UBERON:0001890!3.42e-09!41;UBERON:0006240!3.42e-09!41;UBERON:0002346!4.10e-09!90;UBERON:0002791!5.25e-09!33;UBERON:0002020!7.29e-09!34;UBERON:0003528!7.29e-09!34;UBERON:0004121!8.28e-09!169;UBERON:0004111!1.59e-08!241;UBERON:0001869!2.40e-08!32;UBERON:0000477!6.00e-08!286;UBERON:0000924!7.64e-08!173;UBERON:0006601!7.64e-08!173;UBERON:0000922!2.29e-07!612;UBERON:0000025!2.38e-07!194;UBERON:0000923!3.45e-07!604;UBERON:0005291!3.45e-07!604;UBERON:0006598!3.45e-07!604;UBERON:0002532!3.45e-07!604;UBERON:0002050!3.56e-07!605;UBERON:0005423!3.56e-07!605;UBERON:0000062!5.71e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.01e-08;34!UBERON:0002791;6.17e-08;32!UBERON:0003528;6.26e-08;34!UBERON:0002020;6.26e-08;34!UBERON:0001869;8.16e-08;32!UBERON:0002780;8.49e-08;41!UBERON:0001890;8.49e-08;41!UBERON:0000073;1.92e-07;53!UBERON:0002616;1.92e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.21e-13,56;UBERON:0005068,3.21e-13,56;UBERON:0006241,3.21e-13,56;UBERON:0007135,3.21e-13,56;UBERON:0000073,1.06e-12,53;UBERON:0002616,1.06e-12,53;UBERON:0001017,2.09e-12,81;UBERON:0003075,3.15e-12,82;UBERON:0007284,3.15e-12,82;UBERON:0007023,1.76e-11,114;UBERON:0003056,3.40e-11,61;UBERON:0001016,4.42e-11,89;UBERON:0000955,5.96e-11,68;UBERON:0006238,5.96e-11,68;UBERON:0002346,1.29e-10,86;UBERON:0010371,1.31e-10,104;UBERON:0001893,3.29e-10,34;UBERON:0002780,3.43e-10,41;UBERON:0001890,3.43e-10,41;UBERON:0003080,3.43e-10,41;UBERON:0006240,3.43e-10,41;UBERON:0003528,1.49e-09,34;UBERON:0002020,1.49e-09,34;UBERON:0002791,4.43e-09,32;UBERON:0001869,5.84e-09,32;UBERON:0010314,4.32e-08,132;UBERON:0004111,8.00e-08,240;UBERON:0011216,1.43e-07,223;UBERON:0004121,1.67e-07,171;UBERON:0000924,1.67e-07,171;UBERON:0006601,1.67e-07,171;UBERON:0000025,5.52e-07,192 | |||
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| |||
|short_description=p2@PAOX | |||
}} |
Revision as of 05:43, 11 January 2014
Short description: | p2@PAOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAOX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356306, ENST00000476834, ENST00000480071, ENST00000483211, ENST00000529585_5end |
EntrezGene: | PAOX |
HGNC: | 20837 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 3.21e-13 | 56 |
neural rod | 3.21e-13 | 56 |
future spinal cord | 3.21e-13 | 56 |
neural keel | 3.21e-13 | 56 |
regional part of nervous system | 1.06e-12 | 53 |
regional part of brain | 1.06e-12 | 53 |
central nervous system | 2.09e-12 | 81 |
neural plate | 3.15e-12 | 82 |
presumptive neural plate | 3.15e-12 | 82 |
adult organism | 1.76e-11 | 114 |
pre-chordal neural plate | 3.40e-11 | 61 |
nervous system | 4.42e-11 | 89 |
brain | 5.96e-11 | 68 |
future brain | 5.96e-11 | 68 |
neurectoderm | 1.29e-10 | 86 |
ecto-epithelium | 1.31e-10 | 104 |
telencephalon | 3.29e-10 | 34 |
regional part of forebrain | 3.43e-10 | 41 |
forebrain | 3.43e-10 | 41 |
anterior neural tube | 3.43e-10 | 41 |
future forebrain | 3.43e-10 | 41 |
brain grey matter | 1.49e-09 | 34 |
gray matter | 1.49e-09 | 34 |
regional part of telencephalon | 4.43e-09 | 32 |
cerebral hemisphere | 5.84e-09 | 32 |
structure with developmental contribution from neural crest | 4.32e-08 | 132 |
anatomical conduit | 8.00e-08 | 240 |
organ system subdivision | 1.43e-07 | 223 |
ectoderm-derived structure | 1.67e-07 | 171 |
ectoderm | 1.67e-07 | 171 |
presumptive ectoderm | 1.67e-07 | 171 |
tube | 5.52e-07 | 192 |