FFCP PHASE1:Hg19::chr11:74983935..74983939,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:74983935..74983939,- | |||
|id=chr11:74983935..74983939,- | |||
|ontology_enrichment_celltype=CL:0000115!5.54e-10!35;CL:0002139!1.23e-07!24;CL:0002078!5.81e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.07e-13;2!CL:1000398;1.07e-13;2!CL:0002593;1.07e-13;2!CL:0000115;1.09e-10;36!CL:0002078;2.76e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,8.28e-14,2;CL:1000398,8.28e-14,2;CL:0002593,1.55e-13,2;CL:0000115,1.78e-11,36;CL:0002078,2.89e-09,45;CL:0000213,2.86e-07,58;CL:0000215,2.86e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.69e-07;4!DOID:1612;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.40e-07,4;DOID:1612,1.40e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;4.07e-15;7!UBERON:0001281;1.07e-13;2!UBERON:0003497;1.07e-13;2!UBERON:0003909;1.07e-13;2!UBERON:0003835;1.07e-13;2!UBERON:0002456;1.07e-13;2!UBERON:0001280;1.41e-09;3!UBERON:0004647;1.41e-09;3!UBERON:0000353;1.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,4.37e-15,7;UBERON:0001281,8.28e-14,2;UBERON:0003497,8.28e-14,2;UBERON:0003909,8.28e-14,2;UBERON:0003835,8.28e-14,2;UBERON:0002456,1.55e-13,2;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0000353,1.44e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,0.860234595106124,2.08284300964557,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0,0.367663080345869,0,0.625098097988558,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,1.15493158208859,0,0.190254152234598,1.58040879591855,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.492762936082855,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.636406495851874,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0.481764225311099,0.201799707191048,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,1.27149263184303,0,0,0.565412285735763,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0.13223260174269,0.684347351537318,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0.118193840883968,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0.883164973845552,0.546327859818478,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p@chr11:74983935..74983939,- | |||
}} |
Revision as of 09:26, 11 January 2014
Short description: | p@chr11:74983935..74983939, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:74983935..74983939, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 8.28e-14 | 2 |
endothelial cell of hepatic sinusoid | 8.28e-14 | 2 |
smooth muscle cell of the internal thoracic artery | 1.55e-13 | 2 |
endothelial cell | 1.78e-11 | 36 |
meso-epithelial cell | 2.89e-09 | 45 |
lining cell | 2.86e-07 | 58 |
barrier cell | 2.86e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 4.37e-15 | 7 |
hepatic sinusoid | 8.28e-14 | 2 |
abdomen blood vessel | 8.28e-14 | 2 |
sinusoid | 8.28e-14 | 2 |
abdominal segment blood vessel | 8.28e-14 | 2 |
internal thoracic artery | 1.55e-13 | 2 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
parenchyma | 1.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.40e-07 | 4 |
breast cancer | 1.40e-07 | 4 |