FFCP PHASE1:Hg19::chr12:8834231..8834269,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=57494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29228 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULI2 | |||
|association_with_transcript=15bp_to_uc001quu.2,uc009zgf.1_5end | |||
|description=CAGE_peak_4_at_RIMKLB_5end | |||
|id=chr12:8834231..8834269,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.36e-09!254;CL:0000039!2.20e-07!7;CL:0000586!2.20e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.30e-16;7!CL:0000586;3.30e-16;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.31e-16,7;CL:0000586,3.31e-16,7;CL:0000066,2.85e-11,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.68e-13;29!UBERON:0009117;2.28e-11;10!UBERON:0005564;2.28e-11;10 | |||
|ontology_enrichment_disease=DOID:305!2.18e-11!106;DOID:0050687!2.26e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.26e-18,106;DOID:0050687,1.89e-13,143;DOID:162,3.36e-08,235;DOID:14566,6.68e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.17e-13!9;UBERON:0000064!5.44e-10!219;UBERON:0001557!1.06e-09!19;UBERON:0007023!8.45e-09!115;UBERON:0001049!8.48e-08!57;UBERON:0005068!8.48e-08!57;UBERON:0006241!8.48e-08!57;UBERON:0007135!8.48e-08!57;UBERON:0000065!1.33e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.02e-39;9!UBERON:0001557;3.02e-39;9!UBERON:0000473;7.11e-14;8!UBERON:0003135;5.24e-10;11!UBERON:0004909;8.62e-10;2!UBERON:0000072;2.34e-09;37!UBERON:0000065;2.83e-09;44!UBERON:0000991;3.68e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.90e-39,9;UBERON:0001557,1.03e-17,19;UBERON:0000473,6.39e-14,8;UBERON:0003135,4.86e-10,11;UBERON:0004909,6.20e-10,2;UBERON:0008947,8.09e-10,38;UBERON:0003258,8.09e-10,38;UBERON:0000065,1.05e-07,54;UBERON:0000072,1.41e-07,47;UBERON:0000991,3.50e-07,21;UBERON:0009196,3.50e-07,21;UBERON:0009117,3.50e-07,21;UBERON:0005564,3.50e-07,21;UBERON:0004176,7.96e-07,22 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,2.61701557230111,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,1.03366703667732,0.35576626268671,0,0,0,0.488124115096339,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,1.00928340350251,0,0,0,0,0,0,5.91534000199219,3.70886318171824,4.33819853790268,4.96322877295773,4.13970943775572,5.45722423955522,4.85392709376592,6.08286541888573,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,1.13420077793909,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0.496215615637554,2.91577749247319,0,0.128139149255701,1.02341449813341,1.28683136914886,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.53135254993501,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.20453736500431,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0.472775363535873,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0,0.219385397153973,4.79329239483557,0.83654246567162,0.0769502585037971,0.455768223388005,0,0.179515288819544,4.99777910841237,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0.34823682632161,0,0.171986032471617,6.19240520250145,8.69762873325608,6.07654382193748,0.193978032976839,0,0,0,0,0,4.10657903743086,0,0.213452994739353,0,0,0,0,2.73704116177484,0,3.29971648463514,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0,2.87149209830726,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.262272940674991,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,1.02652102730598,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0.3755727921195,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0.260994291965212,0,0.231522474323834,0,0,3.08801447160972,2.63140859494449,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,2.85538840518309,0,0.353909170043221,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0.127762427639595,0,0,2.42786241694653,0.227662191351298,1.77404740325278,0,0,0,0,0,0,0.156986185701028,0.157115589916002,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,0,0,8.83657911202559,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.386747327841463,0,0.357107877211315,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0.109265571963696,0,2.44773191380756,9.35260918429462,6.3407480679043,6.016980943017,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.31037357147929,0,0,0.202117188958219,0.217716747896961,0,0,0.286888821570705,0,0.0814032686109745,0,0,0.269475606319761,0,0.366724332548599,0,0,0,0 | |||
|short_description=p4@RIMKLB | |||
}} |
Revision as of 11:58, 11 January 2014
Short description: | p4@RIMKLB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RIMKLB_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_uc001quu.2, uc009zgf.1_5end |
EntrezGene: | RIMKLB |
HGNC: | 29228 |
UniProt: | Q9ULI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.31e-16 | 7 |
germ cell | 3.31e-16 | 7 |
epithelial cell | 2.85e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.90e-39 | 9 |
upper respiratory tract | 1.03e-17 | 19 |
testis | 6.39e-14 | 8 |
male reproductive organ | 4.86e-10 | 11 |
epithelium of gonad | 6.20e-10 | 2 |
respiratory primordium | 8.09e-10 | 38 |
endoderm of foregut | 8.09e-10 | 38 |
respiratory tract | 1.05e-07 | 54 |
segment of respiratory tract | 1.41e-07 | 47 |
gonad | 3.50e-07 | 21 |
indifferent external genitalia | 3.50e-07 | 21 |
indifferent gonad | 3.50e-07 | 21 |
gonad primordium | 3.50e-07 | 21 |
external genitalia | 7.96e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.26e-18 | 106 |
cell type cancer | 1.89e-13 | 143 |
cancer | 3.36e-08 | 235 |
disease of cellular proliferation | 6.68e-08 | 239 |