FFCP PHASE1:Hg19::chr12:67663056..67663067,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30688 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VP6 | |||
|association_with_transcript=0bp_to_ENST00000545606,NM_018448,uc001stn.2_5end | |||
|description=CAGE_peak_7_at_CAND1_5end | |||
|id=chr12:67663056..67663067,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.40e-20;5!CL:0000039;1.83e-19;7!CL:0000586;1.83e-19;7!CL:0000540;8.66e-11;6!CL:0000404;8.66e-11;6!CL:0002319;1.20e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.49e-20,5;CL:0000039,1.66e-19,7;CL:0000586,1.66e-19,7;CL:0000047,7.88e-12,8;CL:0000540,1.27e-10,6;CL:0000031,1.27e-10,6;CL:0000404,1.27e-10,6;CL:0002319,1.51e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.63e-18;10!UBERON:0005564;3.63e-18;10!CL:0000031;8.66e-11;6 | |||
|ontology_enrichment_disease=DOID:14566!1.21e-08!239;DOID:162!2.49e-08!235;DOID:0050687!9.05e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.69e-12;22!DOID:2994;1.69e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.35e-12,22;DOID:2994,1.35e-12,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.72e-23;8!UBERON:0003135;2.03e-16;11!UBERON:0000991;2.02e-10;21!UBERON:0000922;7.58e-10;49!UBERON:0003101;1.10e-07;22!UBERON:0000079;1.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.52e-23,8;UBERON:0003135,1.13e-16,11;UBERON:0000991,1.26e-10,21;UBERON:0009196,1.26e-10,21;UBERON:0009117,1.26e-10,21;UBERON:0005564,1.26e-10,21;UBERON:0004176,4.45e-10,22;UBERON:0003101,8.42e-08,22;UBERON:0000079,8.42e-08,22 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0,0.655324116390517,0.263766978228454,0.247532705920093,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,1.43117993565528,0.547497700291537,1.12988375635323,0.687720651731561,0.492603536699674,0.472264687882075,0,0,0.154816123316076,0.919421224478927,0,0,0.619737604642413,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,1.1384259382189,0,0.764546456250458,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0,0.637130828648193,0.651083453856419,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.756278537312543,0.886917589850256,0.351339142772504,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0,0,1.62028389576352,0.17859945656816,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.587172493218824,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.206651562351531,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0,0,0.300476117813194,0.340296549480063,0.717558542755448,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,0.503760491138201,0.339121184620975,0.193260853163297,0.272746120590835,0,3.04934265323988,3.31324420803713,3.48581828608555,1.86589899027667,3.02785021050754,2.91981887260664,0,0,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0.245976877086227,0.857839051492628,0.109750285408626,0,0.201057944823262,0,0,0,1.44331342025273,0.463721619900307,0.469634776943287,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0,0.234004265139238,0,0,0.335964256397719,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0,0.300343057843917,0,0.224262168690721,0,0.66004457238855,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0,0.215627574859517,0,1.27047312111232,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0.35142424497814,0,0,1.03473071292505,0.664225598535437,1.10621501125022,0.173767228936166,0.195801157462741,0,0,0,0.106727557803444,0.303127571446259,0,0,0.744323423456331,0.61384789315225,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.116210378459959,0.362578348774867,0,0.184161977871793,0.68888668898764,0.364182336013434,0.262248829918848,0.902399225814824,0.462092022626489,0.784349769176855,0,0.633309773357254,0,0,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0,0.657779629937804,0,0,0,0.650756789328606,0.206082023295445,0.27470839445503,0.330037999682352,0,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.413509717453592,0.429680979473094,0.290033387828457,0.255679882248303,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.30347334256665,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0.589062011728432,0.202182481573316,0,0,0,0,0,0.272999822815972,0.141405431953713,0,2.2054613741845,0,0,0,0,0.405820753925408,0,0,0.430234056612155,0.687743287091848,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0.640944426764839,0,0,0.743212700502875,0.28853842595289,0.924843963529383,0.797131363644112,0,0,0,0.649243880549111,0.280797178113459,0,0.47003968731907,0,0,0.1605880751037,0.201799707191048,1.27753871307098,0,0.307240764308458,0,0,0.586164286206121,0,0,0,0,0,0,0.146508179271894,0.970884173996107,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0,0.552567831062295,0.251932747854276,0.20453736500431,0.492339221844278,0.622079175323615,0.179736702294654,0.358042349351218,0,0,0,0,0,0.463840490809256,1.99613798001194,1.04171104434093,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0,0.520874984799877,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0.217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| |||
|short_description=p7@CAND1 | |||
}} |
Revision as of 14:29, 11 January 2014
Short description: | p7@CAND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CAND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545606, NM_018448, uc001stn.2_5end |
EntrezGene: | CAND1 |
HGNC: | 30688 |
UniProt: | Q86VP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.49e-20 | 5 |
germ line cell | 1.66e-19 | 7 |
germ cell | 1.66e-19 | 7 |
neuronal stem cell | 7.88e-12 | 8 |
neuron | 1.27e-10 | 6 |
neuroblast | 1.27e-10 | 6 |
electrically signaling cell | 1.27e-10 | 6 |
neural cell | 1.51e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
testis | 2.52e-23 | 8 |
male reproductive organ | 1.13e-16 | 11 |
gonad | 1.26e-10 | 21 |
indifferent external genitalia | 1.26e-10 | 21 |
indifferent gonad | 1.26e-10 | 21 |
gonad primordium | 1.26e-10 | 21 |
external genitalia | 4.45e-10 | 22 |
male organism | 8.42e-08 | 22 |
male reproductive system | 8.42e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.35e-12 | 22 |
germ cell cancer | 1.35e-12 | 22 |