FFCP PHASE1:Hg19::chr12:122380333..122380351,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:122380333..122380351,+ | |||
|id=chr12:122380333..122380351,+ | |||
|ontology_enrichment_celltype=CL:0002159!2.17e-19!13;CL:0002076!9.14e-13!43;CL:0002368!4.67e-12!13;CL:0000362!9.28e-10!8;CL:0000223!4.98e-09!59;CL:0002077!1.67e-08!33;CL:0002166!4.92e-08!3;CL:0002621!6.87e-08!3;CL:0000068!2.52e-07!3;CL:0000069!2.52e-07!3;CL:0000307!2.52e-07!3;CL:0000377!2.52e-07!3;CL:0000548!3.64e-07!679;CL:0000004!3.64e-07!679;CL:0000255!3.64e-07!679;CL:0000012!4.96e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.78e-32;14!CL:0002166;1.51e-22;3!CL:0002621;4.02e-22;3!CL:0002195;9.30e-16;2!CL:0002571;9.30e-16;2!CL:0000317;2.32e-15;2!CL:1000448;2.32e-15;2!CL:0002308;2.32e-15;2!CL:0002140;2.32e-15;2!CL:0000362;5.48e-13;9!CL:0002077;1.89e-11;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.35e-32,14;CL:0002166,9.42e-23,3;CL:0002621,2.81e-22,3;CL:0002195,5.99e-16,2;CL:0002571,5.99e-16,2;CL:0000317,2.78e-15,2;CL:1000448,2.78e-15,2;CL:0002308,2.78e-15,2;CL:0002140,2.78e-15,2;CL:0000362,6.83e-13,9;CL:0002077,1.54e-12,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.18e-13!14;DOID:120!6.03e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:4231;5.70e-15;2!DOID:1907;5.70e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,2.99e-15,2;DOID:1907,2.99e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.42e-10!5;UBERON:0004532!1.42e-10!5;UBERON:0003102!3.07e-10!95;UBERON:0001949!6.87e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.02e-22;3!UBERON:0001708;4.60e-17;4!UBERON:0008895;4.60e-17;4!UBERON:0002419;2.32e-15;2!UBERON:0007771;2.32e-15;2!UBERON:0003297;2.32e-15;2!UBERON:0001821;2.32e-15;2!UBERON:0003487;2.32e-15;2!UBERON:0001820;2.32e-15;2!UBERON:0011159;9.17e-14;5!UBERON:0010371;1.22e-10;31!UBERON:0003929;8.46e-10;7!UBERON:0003350;1.24e-08;8!UBERON:0001828;1.24e-08;8!UBERON:0001003;7.57e-08;15!UBERON:0007376;7.57e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.81e-22,3;UBERON:0001708,3.23e-17,4;UBERON:0008895,3.23e-17,4;UBERON:0002419,2.78e-15,2;UBERON:0007771,2.78e-15,2;UBERON:0003297,2.78e-15,2;UBERON:0001821,2.78e-15,2;UBERON:0003487,2.78e-15,2;UBERON:0001820,2.78e-15,2;UBERON:0005089,2.78e-15,2;UBERON:0005088,2.78e-15,2;UBERON:0011159,6.93e-14,5;UBERON:0010188,1.17e-11,6;UBERON:0002539,1.17e-11,6;UBERON:0008816,1.17e-11,6;UBERON:0003102,7.13e-10,99;UBERON:0003350,1.09e-08,8;UBERON:0001828,1.09e-08,8;UBERON:0001003,8.61e-08,15;UBERON:0007376,8.61e-08,15;UBERON:0007383,8.61e-08,15;UBERON:0008814,9.04e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.990130823680373,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0.364295288292542,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,2.38336525463794,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.901428353439581,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,3.00020732649918,1.43402297694502,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,1.20725313949488,2.24803506515239,0.301586917234893,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,4.36753533317035,2.55195175036296,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,2.57360388584666,0,0,0,2.84313558994037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0.802025881213139,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,2.80747967488085,0.2023155617111,0,2.20368642781448,1.3940745403212,0,0,0,0,0,0,0,0.571890581771475,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0,0,0,0.673554789078584,0.670302275535787,1.08890984861323,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.45590489132854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,1.88555227693436,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.751288044986092,1.14241563650639,0.406870733204662,0.727394636810238,0.644463342254931,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70254786070051,1.65695355226657,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:122380333..122380351,+ | |||
}} |
Revision as of 16:25, 11 January 2014
Short description: | p@chr12:122380333..122380351, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122380333..122380351, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 5.35e-32 | 14 |
epithelial cell of Malassez | 9.42e-23 | 3 |
gingival epithelial cell | 2.81e-22 | 3 |
hepatic stem cell | 5.99e-16 | 2 |
hepatic mesenchymal stem cell | 5.99e-16 | 2 |
sebum secreting cell | 2.78e-15 | 2 |
epithelial cell of sweat gland | 2.78e-15 | 2 |
epithelial cell of skin gland | 2.78e-15 | 2 |
acinar cell of sebaceous gland | 2.78e-15 | 2 |
epidermal cell | 6.83e-13 | 9 |
ecto-epithelial cell | 1.54e-12 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.81e-22 | 3 |
jaw skeleton | 3.23e-17 | 4 |
splanchnocranium | 3.23e-17 | 4 |
skin gland | 2.78e-15 | 2 |
epidermis gland | 2.78e-15 | 2 |
gland of integumental system | 2.78e-15 | 2 |
sebaceous gland | 2.78e-15 | 2 |
skin sebaceous gland | 2.78e-15 | 2 |
sweat gland | 2.78e-15 | 2 |
sweat gland placode | 2.78e-15 | 2 |
sebaceous gland placode | 2.78e-15 | 2 |
primary subdivision of cranial skeletal system | 6.93e-14 | 5 |
protuberance | 1.17e-11 | 6 |
pharyngeal arch | 1.17e-11 | 6 |
embryonic head | 1.17e-11 | 6 |
surface structure | 7.13e-10 | 99 |
epithelium of mucosa | 1.09e-08 | 8 |
gingiva | 1.09e-08 | 8 |
skin epidermis | 8.61e-08 | 15 |
outer epithelium | 8.61e-08 | 15 |
enveloping layer of ectoderm | 8.61e-08 | 15 |
pharyngeal arch system | 9.04e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 2.99e-15 | 2 |
malignant fibroxanthoma | 2.99e-15 | 2 |