FFCP PHASE1:Hg19::chr14:65785502..65785529,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000553754_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000553754_5end | |||
|id=chr14:65785502..65785529,- | |||
|ontology_enrichment_celltype=CL:0000945!7.59e-58!24;CL:0000826!7.59e-58!24;CL:0000236!2.95e-34!14;CL:0000542!2.12e-25!53;CL:0000051!2.12e-25!53;CL:0000838!1.54e-23!52;CL:0002087!5.62e-11!119;CL:0000738!1.94e-08!140;CL:0002031!1.61e-07!124;CL:0000037!3.80e-07!172;CL:0000566!3.80e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.67e-88;24!CL:0000236;1.29e-62;13!CL:0000542;1.34e-23;53!CL:0000946;3.70e-08;1!CL:0000786;3.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.59e-88,24;CL:0000826,3.59e-88,24;CL:0000236,5.53e-69,14;CL:0000838,8.29e-39,52;CL:0000542,5.22e-38,53;CL:0000051,5.22e-38,53;CL:0002087,2.07e-15,115;CL:0002031,1.26e-14,120;CL:0000738,1.70e-12,136;CL:0002032,5.17e-10,161;CL:0000837,5.17e-10,161;CL:0000037,1.89e-09,168;CL:0000988,8.60e-09,177;CL:0000946,3.83e-08,1;CL:0000786,3.83e-08,1;CL:0000980,3.83e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.34e-23;53!UBERON:0001045;4.55e-08;1!UBERON:0006298;9.29e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.70e-08;1!DOID:0050177;3.70e-08;1!DOID:0050427;3.70e-08;1!DOID:2355;9.29e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.58e-08,1;DOID:0050177,3.58e-08,1;DOID:0050427,3.58e-08,1;DOID:2355,1.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.87e-17!115;UBERON:0000178!5.21e-16!15;UBERON:0000179!5.21e-16!15;UBERON:0000463!5.21e-16!15;UBERON:0004177!3.74e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.05e-15;15!UBERON:0000179;4.05e-15;15!UBERON:0000463;4.05e-15;15!UBERON:0002390;2.72e-08;32!UBERON:0002372;3.22e-08;1!UBERON:0001961;3.22e-08;1!UBERON:0001744;3.22e-08;1!UBERON:0001042;3.22e-08;1!UBERON:0001735;3.22e-08;1!UBERON:0001154;4.55e-08;1!UBERON:0001153;4.55e-08;1!UBERON:0009854;4.55e-08;1!UBERON:0001736;9.29e-08;1!UBERON:0002193;7.39e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.38e-15,15;UBERON:0000179,4.38e-15,15;UBERON:0000463,4.38e-15,15;UBERON:0002372,3.11e-08,1;UBERON:0001961,3.11e-08,1;UBERON:0001744,3.11e-08,1;UBERON:0001735,3.11e-08,1;UBERON:0001154,5.05e-08,1;UBERON:0001153,5.05e-08,1;UBERON:0001045,5.05e-08,1;UBERON:0001736,9.29e-08,1;UBERON:0006298,9.29e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.72411237844886,2.67616656466509,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,9.83049500271837,13.3426388079533,9.38806489646316,9.20910770182829,10.3455439191807,8.59358334620321,2.86216126360609,7.96898156753228,5.28513470433845,12.6150165281326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,3.41788312304498,1.19115887728894,2.46817363851717,0.648473311192717,1.08006287447623,0,0,0,0,0.743212700502875,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31540698637377,0,0,3.56945935837101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72459348978695,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,1.2217909337381,0.644578879735772,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0.12729431655633,0,0.217716747896961,0,5.79227655925453,0.286888821570705,0,0,0,0,0,0,0,0,0,3.42165449104745,4.80852738454849 | |||
|short_description=p1@ENST00000553754 | |||
}} |
Revision as of 20:37, 11 January 2014
Short description: | p1@ENST00000553754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553754_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000553754_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.59e-88 | 24 |
pro-B cell | 3.59e-88 | 24 |
B cell | 5.53e-69 | 14 |
lymphoid lineage restricted progenitor cell | 8.29e-39 | 52 |
lymphocyte | 5.22e-38 | 53 |
common lymphoid progenitor | 5.22e-38 | 53 |
nongranular leukocyte | 2.07e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-14 | 120 |
leukocyte | 1.70e-12 | 136 |
hematopoietic oligopotent progenitor cell | 5.17e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-10 | 161 |
hematopoietic stem cell | 1.89e-09 | 168 |
hematopoietic cell | 8.60e-09 | 177 |
antibody secreting cell | 3.83e-08 | 1 |
plasma cell | 3.83e-08 | 1 |
plasmablast | 3.83e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 4.38e-15 | 15 |
haemolymphatic fluid | 4.38e-15 | 15 |
organism substance | 4.38e-15 | 15 |
tonsil | 3.11e-08 | 1 |
mucosa-associated lymphoid tissue | 3.11e-08 | 1 |
lymphoid tissue | 3.11e-08 | 1 |
tonsillar ring | 3.11e-08 | 1 |
vermiform appendix | 5.05e-08 | 1 |
caecum | 5.05e-08 | 1 |
midgut | 5.05e-08 | 1 |
submandibular gland | 9.29e-08 | 1 |
submandibular gland primordium | 9.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.58e-08 | 1 |
monogenic disease | 3.58e-08 | 1 |
xeroderma pigmentosum | 3.58e-08 | 1 |
anemia | 1.21e-07 | 1 |