FFCP PHASE1:Hg19::chr15:71407352..71407363,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr15:71407352..71407363,+ | |||
|id=chr15:71407352..71407363,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.03e-13!254;CL:0000362!2.94e-10!8;CL:0000240!1.09e-08!6;CL:0000311!1.09e-08!6;CL:0000079!1.09e-08!6;CL:0000237!1.09e-08!6;CL:0000036!1.09e-08!6;CL:0000357!1.09e-08!6;CL:0000114!1.09e-08!6;CL:0002159!1.53e-08!13;CL:0000244!7.28e-08!4;CL:0000731!7.28e-08!4;CL:0000317!8.68e-08!2;CL:1000448!8.68e-08!2;CL:0002308!8.68e-08!2;CL:0002140!8.68e-08!2;CL:0002536!1.13e-07!2;CL:0000076!5.41e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.37e-10;2!CL:1000448;2.37e-10;2!CL:0002308;2.37e-10;2!CL:0002140;2.37e-10;2!CL:0000362;5.63e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.99e-10,2;CL:1000448,2.99e-10,2;CL:0002308,2.99e-10,2;CL:0002140,2.99e-10,2;CL:0000362,7.16e-09,9;CL:0000076,3.13e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!5.22e-14!4;DOID:1612!5.22e-14!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.63e-19;4!DOID:1612;5.63e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.64e-19,4;DOID:1612,5.64e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.85e-10!82;UBERON:0000365!2.21e-10!5;UBERON:0005631!2.48e-10!14;UBERON:0000158!2.48e-10!14;UBERON:0005153!5.95e-10!37;UBERON:0005910!1.18e-08!6;UBERON:0002419!8.68e-08!2;UBERON:0007771!8.68e-08!2;UBERON:0003297!8.68e-08!2;UBERON:0001821!8.68e-08!2;UBERON:0003487!8.68e-08!2;UBERON:0001820!8.68e-08!2;UBERON:0005089!8.68e-08!2;UBERON:0005088!8.68e-08!2;UBERON:0000305!1.49e-07!7;UBERON:0000162!1.65e-07!14;UBERON:0001353!1.65e-07!14;UBERON:0000163!1.65e-07!14;UBERON:0006866!1.65e-07!14;UBERON:0000164!1.65e-07!14;UBERON:0000931!1.65e-07!14;UBERON:0002367!5.21e-07!11;UBERON:0010147!5.21e-07!11;UBERON:0009846!5.21e-07!11;UBERON:0003353!5.21e-07!11;UBERON:0004902!5.21e-07!11;UBERON:0003820!5.21e-07!11;UBERON:0009847!5.21e-07!11;UBERON:0004122!5.80e-07!15;UBERON:0004119!7.78e-07!169;UBERON:0000925!7.78e-07!169;UBERON:0006595!7.78e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.37e-10;2!UBERON:0007771;2.37e-10;2!UBERON:0003297;2.37e-10;2!UBERON:0001821;2.37e-10;2!UBERON:0003487;2.37e-10;2!UBERON:0001820;2.37e-10;2!UBERON:0000310;3.62e-08;10!UBERON:0001443;1.67e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.99e-10,2;UBERON:0007771,2.99e-10,2;UBERON:0003297,2.99e-10,2;UBERON:0001821,2.99e-10,2;UBERON:0003487,2.99e-10,2;UBERON:0001820,2.99e-10,2;UBERON:0005089,2.99e-10,2;UBERON:0005088,2.99e-10,2;UBERON:0000310,3.63e-08,10;UBERON:0001443,1.67e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.804231779293047,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.78657797492418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0,1.68900326502395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0.349839999984783,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,1.323967823502,0.941798755221676,0,0,0,0,0,0,0,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.211200673038813,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,1.92914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071746,0.667388411352415,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,5.53435801990904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:71407352..71407363,+ | |||
}} |
Revision as of 00:22, 12 January 2014
Short description: | p@chr15:71407352..71407363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:71407352..71407363, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.99e-10 | 2 |
epithelial cell of sweat gland | 2.99e-10 | 2 |
epithelial cell of skin gland | 2.99e-10 | 2 |
acinar cell of sebaceous gland | 2.99e-10 | 2 |
epidermal cell | 7.16e-09 | 9 |
squamous epithelial cell | 3.13e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.99e-10 | 2 |
epidermis gland | 2.99e-10 | 2 |
gland of integumental system | 2.99e-10 | 2 |
sebaceous gland | 2.99e-10 | 2 |
skin sebaceous gland | 2.99e-10 | 2 |
sweat gland | 2.99e-10 | 2 |
sweat gland placode | 2.99e-10 | 2 |
sebaceous gland placode | 2.99e-10 | 2 |
breast | 3.63e-08 | 10 |
chest | 1.67e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.64e-19 | 4 |
breast cancer | 5.64e-19 | 4 |