FFCP PHASE1:Hg19::chr16:19429225..19429228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79838 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22999 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=207bp_to_ENST00000542583,uc010var.1_5end | |||
|coexpression_cluster_id=C2361 | |||
|description=CAGE_peak_13_at_TMC5_5end | |||
|id=chr16:19429225..19429228,+ | |||
|ontology_enrichment_celltype=CL:0000167!1.03e-09!1;CL:0000164!1.03e-09!1;CL:0000502!1.03e-09!1;CL:0000172!1.03e-09!1;CL:0000173!1.03e-09!1;CL:0002351!1.03e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.73e-29;1!CL:0000164;2.73e-29;1!CL:0000502;2.73e-29;1!CL:0000172;2.73e-29;1!CL:0000173;2.73e-29;1!CL:0002178;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.78e-29,1;CL:0000164,1.78e-29,1;CL:0000502,1.78e-29,1;CL:0000172,1.78e-29,1;CL:0000173,1.78e-29,1;CL:0002351,1.78e-29,1;CL:0002178,9.90e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002351;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:3493!1.62e-17!2;DOID:299!3.11e-11!25;DOID:4430!1.03e-09!1;DOID:3111!1.32e-09!1;DOID:3603!1.32e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.73e-29;1!DOID:3603;2.73e-29;1!DOID:4430;2.73e-29;1!DOID:3493;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.78e-29,1;DOID:3111,4.20e-29,1;DOID:3603,4.20e-29,1;DOID:3493,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0004913!1.69e-09!1;UBERON:0003703!1.69e-09!1;UBERON:0001174!1.69e-09!1;UBERON:0004914!1.69e-09!1;UBERON:0002108!6.46e-09!14;UBERON:0004119!6.33e-08!169;UBERON:0000925!6.33e-08!169;UBERON:0006595!6.33e-08!169;UBERON:0005409!9.47e-08!35;UBERON:0000160!3.54e-07!27;UBERON:0004921!6.84e-07!129;UBERON:0004185!6.84e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.21e-15;2!UBERON:0005409;7.66e-12;22!UBERON:0004921;4.60e-08;33!UBERON:0000160;2.52e-07;17!UBERON:0002108;5.08e-07;4!UBERON:0000945;6.21e-07;5!UBERON:0010039;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.37e-15,2;UBERON:0005409,1.40e-10,25;UBERON:0000160,2.44e-07,17;UBERON:0002108,4.79e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,2.56526937059684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,2.51526888159466,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3741032706134,0.853425474875886,0,0,0,0,0,0,0,0,0,0.150962843566674,2.85544384999395,0.437119121007915,0,0,1.88541237681301,0,0,0,0,0,0,0,0.71421575442263,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29099969706817,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@TMC5 | |||
}} |
Revision as of 02:37, 12 January 2014
Short description: | p13@TMC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TMC5_5end |
Coexpression cluster: | C2361_small_somatostatinoma_colon_signet_trachea_lung_temporal |
Association with transcript: | 207bp_to_ENST00000542583, uc010var.1_5end |
EntrezGene: | TMC5 |
HGNC: | 22999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.78e-29 | 1 |
enteroendocrine cell | 1.78e-29 | 1 |
type D enteroendocrine cell | 1.78e-29 | 1 |
somatostatin secreting cell | 1.78e-29 | 1 |
pancreatic D cell | 1.78e-29 | 1 |
progenitor cell of endocrine pancreas | 1.78e-29 | 1 |
epithelial cell of stomach | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.37e-15 | 2 |
gastrointestinal system | 1.40e-10 | 25 |
intestine | 2.44e-07 | 17 |
small intestine | 4.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.78e-29 | 1 |
cystadenocarcinoma | 4.20e-29 | 1 |
mucinous cystadenocarcinoma | 4.20e-29 | 1 |
signet ring cell adenocarcinoma | 2.05e-15 | 2 |