FFCP PHASE1:Hg19::chr16:72127806..72127838,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17211 | |||
|TSSclassifier=strong | |||
|UniProt=B4DVG8 | |||
|association_with_transcript=60bp_to_ENST00000536867_5end | |||
|description=CAGE_peak_1_at_DHX38_5end | |||
|id=chr16:72127806..72127838,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-12!115;UBERON:0003075!7.23e-12!86;UBERON:0007284!7.23e-12!86;UBERON:0002346!1.58e-11!90;UBERON:0001049!8.80e-11!57;UBERON:0005068!8.80e-11!57;UBERON:0006241!8.80e-11!57;UBERON:0007135!8.80e-11!57;UBERON:0004121!3.70e-10!169;UBERON:0000924!4.72e-10!173;UBERON:0006601!4.72e-10!173;UBERON:0000062!1.98e-09!511;UBERON:0001017!2.75e-09!82;UBERON:0000955!4.89e-09!69;UBERON:0006238!4.89e-09!69;UBERON:0002780!8.93e-09!41;UBERON:0001890!8.93e-09!41;UBERON:0006240!8.93e-09!41;UBERON:0005743!1.43e-08!86;UBERON:0002616!1.81e-08!59;UBERON:0002020!3.34e-08!34;UBERON:0003528!3.34e-08!34;UBERON:0002791!4.32e-08!33;UBERON:0001893!4.38e-08!34;UBERON:0003080!5.53e-08!42;UBERON:0003056!9.22e-08!61;UBERON:0000033!1.23e-07!123;UBERON:0000073!1.45e-07!94;UBERON:0001016!1.45e-07!94;UBERON:0001869!3.09e-07!32;UBERON:0000475!3.22e-07!365;UBERON:0000153!4.36e-07!129;UBERON:0007811!4.36e-07!129;UBERON:0000468!9.78e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.11e-07;34!UBERON:0003528;5.67e-07;34!UBERON:0002020;5.67e-07;34!UBERON:0002780;7.51e-07;41!UBERON:0001890;7.51e-07;41!UBERON:0000073;7.89e-07;53!UBERON:0002616;7.89e-07;53!UBERON:0002791;8.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.51e-12,82;UBERON:0007284,3.51e-12,82;UBERON:0002346,8.24e-12,86;UBERON:0007023,8.64e-12,114;UBERON:0001049,1.36e-11,56;UBERON:0005068,1.36e-11,56;UBERON:0006241,1.36e-11,56;UBERON:0007135,1.36e-11,56;UBERON:0000073,4.12e-11,53;UBERON:0002616,4.12e-11,53;UBERON:0010371,5.50e-11,104;UBERON:0001017,7.04e-10,81;UBERON:0004121,7.26e-10,171;UBERON:0000924,7.26e-10,171;UBERON:0006601,7.26e-10,171;UBERON:0000955,1.12e-09,68;UBERON:0006238,1.12e-09,68;UBERON:0003056,7.73e-09,61;UBERON:0002780,8.93e-09,41;UBERON:0001890,8.93e-09,41;UBERON:0003080,8.93e-09,41;UBERON:0006240,8.93e-09,41;UBERON:0001016,1.11e-08,89;UBERON:0003528,3.34e-08,34;UBERON:0002020,3.34e-08,34;UBERON:0001893,4.38e-08,34;UBERON:0011216,5.22e-08,223;UBERON:0010314,5.35e-08,132;UBERON:0002791,1.13e-07,32;UBERON:0001869,3.09e-07,32 | |||
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| |||
|short_description=p1@DHX38 | |||
}} |
Revision as of 12:13, 20 January 2014
Short description: | p1@DHX38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DHX38_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000536867_5end |
EntrezGene: | DHX38 |
HGNC: | 17211 |
UniProt: | B4DVG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 3.51e-12 | 82 |
presumptive neural plate | 3.51e-12 | 82 |
neurectoderm | 8.24e-12 | 86 |
adult organism | 8.64e-12 | 114 |
neural tube | 1.36e-11 | 56 |
neural rod | 1.36e-11 | 56 |
future spinal cord | 1.36e-11 | 56 |
neural keel | 1.36e-11 | 56 |
regional part of nervous system | 4.12e-11 | 53 |
regional part of brain | 4.12e-11 | 53 |
ecto-epithelium | 5.50e-11 | 104 |
central nervous system | 7.04e-10 | 81 |
ectoderm-derived structure | 7.26e-10 | 171 |
ectoderm | 7.26e-10 | 171 |
presumptive ectoderm | 7.26e-10 | 171 |
brain | 1.12e-09 | 68 |
future brain | 1.12e-09 | 68 |
pre-chordal neural plate | 7.73e-09 | 61 |
regional part of forebrain | 8.93e-09 | 41 |
forebrain | 8.93e-09 | 41 |
anterior neural tube | 8.93e-09 | 41 |
future forebrain | 8.93e-09 | 41 |
nervous system | 1.11e-08 | 89 |
brain grey matter | 3.34e-08 | 34 |
gray matter | 3.34e-08 | 34 |
telencephalon | 4.38e-08 | 34 |
organ system subdivision | 5.22e-08 | 223 |
structure with developmental contribution from neural crest | 5.35e-08 | 132 |
regional part of telencephalon | 1.13e-07 | 32 |
cerebral hemisphere | 3.09e-07 | 32 |