FFCP PHASE1:Hg19::chr17:74524635..74524670,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1231 | |||
|description=CAGE_peak_at_chr17:74524635..74524670,- | |||
|id=chr17:74524635..74524670,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.60e-10;10!CL:0002567;8.95e-10;3!CL:0002621;5.02e-09;3!CL:0002166;5.09e-09;3!CL:0000147;6.63e-09;14!CL:0002622;2.44e-08;3!CL:0002077;6.16e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.03e-10,10;CL:0000541,9.03e-10,10;CL:0002567,9.04e-10,3;CL:0002621,3.12e-09,3;CL:0002166,4.44e-09,3;CL:0002077,6.19e-09,34;CL:0000147,9.85e-09,14;CL:0002622,2.31e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.77e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.56e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.04e-10!365;UBERON:0000481!2.22e-10!347;UBERON:0000119!4.29e-09!312;UBERON:0000483!7.49e-09!309;UBERON:0000486!2.62e-08!82;UBERON:0000914!9.28e-08!83;UBERON:0002329!9.28e-08!83;UBERON:0003077!9.28e-08!83;UBERON:0003059!9.28e-08!83;UBERON:0007282!9.28e-08!83;UBERON:0009618!9.28e-08!83;UBERON:0007285!9.28e-08!83;UBERON:0000468!1.65e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;4.03e-11;31!UBERON:0001949;5.02e-09;3!UBERON:0002367;3.63e-08;11!UBERON:0010147;3.63e-08;11!UBERON:0001003;1.32e-07;15!UBERON:0007376;1.32e-07;15!UBERON:0003937;2.02e-07;12!UBERON:0005399;2.02e-07;12!UBERON:0001708;7.71e-07;4!UBERON:0008895;7.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.12e-09,3;UBERON:0003102,8.15e-09,99;UBERON:0002367,3.43e-08,11;UBERON:0010147,3.43e-08,11;UBERON:0009846,3.43e-08,11;UBERON:0003353,3.43e-08,11;UBERON:0004902,3.43e-08,11;UBERON:0003820,3.43e-08,11;UBERON:0009847,3.43e-08,11;UBERON:0001003,1.55e-07,15;UBERON:0007376,1.55e-07,15;UBERON:0007383,1.55e-07,15;UBERON:0003937,1.92e-07,12;UBERON:0005399,1.92e-07,12;UBERON:0010188,2.61e-07,6;UBERON:0002539,2.61e-07,6;UBERON:0008816,2.61e-07,6;UBERON:0001708,6.96e-07,4;UBERON:0008895,6.96e-07,4 | |||
|phase1_expression=3.81524596468169,0.642301571672949,0.563817616383885,0,2.68176656656373,0,0,0,1.30592814099919,0.491467873003018,0,0,0.263766978228454,0.618831764800233,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.50602959389125,0.739508020333575,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,1.2786256184353,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0.665188192387692,0,0.589405839739707,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0.622422070799533,1.0776853765575,1.47115712802113,0.756787138224657,0.576175924479999,0.468642863667593,0.312160076830321,0,0.149448680551801,0,0,0,0,1.10550885580591,0,0,0,0.910161361938026,2.15585442544872,0,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0.680593098960126,0,0.213557388818567,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,5.9910864480622,1.90922284413584,5.16248271700207,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,4.7192622725709,1.1240175325762,0.100528972411631,0.740707561268237,0,2.07986957055916,1.44331342025273,0.115930404975077,0.234817388471643,0.433099343283221,0,0,0,0,0,0,0,2.81201501960331,3.02367830757947,2.55195175036296,0,0,0,0,0,0.207328115540772,0,0,1.26995788584338,11.4596527667483,10.5495702489042,10.2643467613623,3.18765227380303,0,8.28896654628677,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0.266422179016099,3.28849385413739,1.62786481617433,0,0.325736184293735,2.48774364119782,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.813795071099207,0,0,0,0,0.902838299183157,18.1926003244788,4.1389228517002,0,0,0.0868836144680828,1.76221041716467,1.71571711905428,0,0,0,0,0,0,2.48107807818777,0.153461973288062,1.40330047216537,2.43464383585832,0,1.28683136914886,0,0.154209693802656,0.177561725313127,0.164254312027618,1.03850885836724,0.232420756919918,0,5.61418116849198,0,1.49258782613989,1.27463817604702,3.40923478894503,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0.082509499920588,0.574265537996172,1.30012049207304,0,1.25671933779759,0.462145851343933,0.767518373630648,0.413509717453592,0.859361958946189,0.435050081742686,0.511359764496605,0.445160178233687,1.98341898433174,2.11409074101617,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,0.767693373934002,0.42793898803392,0,0,0.539617372749944,0.823611089208164,1.41374882814824,0,0,0,1.95053495635836,0.243713489631284,0,1.36499911407986,4.94919011837995,1.13008116620243,0.551365343546124,0,0,0.578775534266688,1.9676842561399,0,0,0.281695602532241,0,0,0,0.354761064070598,0.422215270595328,2.96365403663912,1.13841952129715,1.74967360122491,0.288666338176536,0,3.26672954583968,0.282431402330337,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0,0,0.179515288819544,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0.694238953340524,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0.687481272035051,0.717873024576814,0.399358000997982,0,0,0.335917362433631,0,0,0,0.247247575143499,0.0674035438541849,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,0.182248669974074,0.335434687599266,0.236417121897595,0.209818352539992,0.105600336519406,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0.533937062838473,0,1.65695622138878,0,0,0,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0,0,0.18628920882415,0,0,3.4879297034579,3.99651466962954,0,0,0,0.597019211547496,0,1.10961172300523,0.189403005275089,2.26411111577318,0,0.457680136793847,0.453692771289717,0.466311601748341,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160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| |||
|short_description=p@chr17:74524635..74524670,- | |||
}} |
Revision as of 17:28, 20 January 2014
Short description: | p@chr17:74524635..74524670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74524635..74524670, - |
Coexpression cluster: | C1231_Melanocyte_Mallassezderived_Gingival_Keratinocyte_melanoma_Sebocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.03e-10 | 10 |
melanoblast | 9.03e-10 | 10 |
light melanocyte | 9.04e-10 | 3 |
gingival epithelial cell | 3.12e-09 | 3 |
epithelial cell of Malassez | 4.44e-09 | 3 |
ecto-epithelial cell | 6.19e-09 | 34 |
pigment cell | 9.85e-09 | 14 |
prostate stromal cell | 2.31e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.12e-09 | 3 |
surface structure | 8.15e-09 | 99 |
prostate gland | 3.43e-08 | 11 |
male accessory sex gland | 3.43e-08 | 11 |
embryonic cloacal epithelium | 3.43e-08 | 11 |
epithelium of hindgut | 3.43e-08 | 11 |
urogenital sinus epithelium | 3.43e-08 | 11 |
prostate bud | 3.43e-08 | 11 |
prostate field | 3.43e-08 | 11 |
skin epidermis | 1.55e-07 | 15 |
outer epithelium | 1.55e-07 | 15 |
enveloping layer of ectoderm | 1.55e-07 | 15 |
sex gland | 1.92e-07 | 12 |
male reproductive gland | 1.92e-07 | 12 |
protuberance | 2.61e-07 | 6 |
pharyngeal arch | 2.61e-07 | 6 |
embryonic head | 2.61e-07 | 6 |
jaw skeleton | 6.96e-07 | 4 |
splanchnocranium | 6.96e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.56e-07 | 2 |