FFCP PHASE1:Hg19::chr2:74135827..74135858,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr2:74135827..74135858,+ | |||
|id=chr2:74135827..74135858,+ | |||
|ontology_enrichment_celltype=CL:0000192!7.36e-08!42;CL:0000514!7.36e-08!42;CL:0000393!2.32e-07!60;CL:0000211!2.32e-07!60;CL:0000183!4.00e-07!59;CL:0000187!8.78e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.25e-10;4!CL:0002622;3.51e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.21e-10,4;CL:0002622,3.70e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;6.60e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-12!115;UBERON:0005156!8.73e-10!59;UBERON:0000990!8.73e-10!59;UBERON:0000481!7.15e-09!347;UBERON:0002385!9.97e-09!63;UBERON:0001015!9.97e-09!63;UBERON:0000383!9.97e-09!63;UBERON:0003104!2.64e-08!238;UBERON:0009142!2.64e-08!238;UBERON:0001007!4.58e-08!155;UBERON:0001555!4.58e-08!155;UBERON:0007026!4.58e-08!155;UBERON:0004921!5.97e-08!129;UBERON:0004185!5.97e-08!129;UBERON:0004119!1.03e-07!169;UBERON:0000925!1.03e-07!169;UBERON:0006595!1.03e-07!169;UBERON:0003101!1.11e-07!22;UBERON:0000079!1.11e-07!22;UBERON:0001134!2.10e-07!61;UBERON:0002036!2.10e-07!61;UBERON:0003082!2.10e-07!61;UBERON:0000922!5.15e-07!612;UBERON:0000468!8.29e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.85e-13;17!UBERON:0005409;7.69e-12;22!UBERON:0001310;1.25e-10;4!UBERON:0003101;4.09e-10;22!UBERON:0000079;4.09e-10;22!UBERON:0006947;3.86e-09;3!UBERON:0004054;3.86e-09;3!UBERON:0004921;2.92e-08;33!UBERON:0000059;3.31e-08;11!UBERON:0005156;5.72e-08;59!UBERON:0000990;5.72e-08;59!UBERON:0003937;3.02e-07;12!UBERON:0005399;3.02e-07;12!UBERON:0001155;3.21e-07;9!UBERON:0005904;6.42e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.41e-13,59;UBERON:0000990,1.41e-13,59;UBERON:0000160,5.16e-13,17;UBERON:0001310,1.21e-10,4;UBERON:0005409,3.78e-10,25;UBERON:0003101,4.32e-10,22;UBERON:0000079,4.32e-10,22;UBERON:0003133,9.73e-10,48;UBERON:0007023,1.84e-09,114;UBERON:0001046,1.85e-09,19;UBERON:0006947,3.92e-09,3;UBERON:0004054,3.92e-09,3;UBERON:0000059,3.59e-08,11;UBERON:0000162,4.07e-08,14;UBERON:0001353,4.07e-08,14;UBERON:0000163,4.07e-08,14;UBERON:0006866,4.07e-08,14;UBERON:0000164,4.07e-08,14;UBERON:0000931,4.07e-08,14;UBERON:0001007,1.44e-07,145;UBERON:0001555,1.44e-07,145;UBERON:0007026,1.44e-07,145;UBERON:0004122,1.69e-07,15;UBERON:0003064,1.96e-07,28;UBERON:0003937,3.19e-07,12;UBERON:0005399,3.19e-07,12;UBERON:0001155,3.51e-07,9;UBERON:0005904,6.49e-07,4;UBERON:0004119,8.05e-07,160;UBERON:0000925,8.05e-07,160;UBERON:0006595,8.05e-07,160;UBERON:0004921,9.03e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,10.1319951267324,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,1.88072832886853,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,3.20246987189115,0.24666754841716,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0.491337269247072,0,3.56400857184616,3.4617370098998,0,0,0,0,0,0.877955241761676,0,1.65261864797256,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.517086863031111,0,0,6.11657668145202,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,4.59447743336456,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,1.24782516918484,0,0,0,2.10662269809403,0,0,0,0.553107505625109,0.173767228936166,1.95801157462741,1.02943027143257,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0,0,0,0,0,1.03850885836724,0.116210378459959,0.241718899183244,0,0,2.41110341145674,3.45973219212762,5.24497659837697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0,0.979352392114111,0,0,0,0,1.39453664789186,0,0,0,0,0,0.9266210955196,2.28999818787186,0,0.949138274156178,0,0.511795582622668,0.42793898803392,0,1.56989728039846,0.359744915166629,1.09814811894422,0.117812402345686,0,0,0,0.48763373908959,0,0,0.818999468447914,2.40389234321312,0,1.10273068709225,0,1.75380354101505,0,1.31178950409327,7.10186319369464,4.3375289733965,2.53526042279017,0.143411352204052,0.0982490410131212,9.63011838999376,0,0,0,0,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,7.45966571934099,0,0.409074730008619,0,0,0,0,0,104.167436352602,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,1.04174996959975,0,0,0,0,0,0.658156191461918,0,0,17.4677086803619,0,0,0.0897576444097721,0.217294743844016,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9241908972561,33.4369593822622,73.323617392035,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,14.5996229054275,3.62972148145992,0,0.568679216656392,0,0,0,0,0,0,0,0,0.173559738335131,0,0,19.5693868431074,0,0,0,0,84.6714113943901,0,1.80784592624426,0,0,0,0,0,27.5354363213765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,1.83328339209347,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0.788057072991982,0,0,0,0,2.85878130549347,1.98627591109629,0,1.08599920350743,7.77799342081141,0.979762080328227,0,0,0,0,0,1.32506888912221,0,0,0,0,1.70859860108311,1.10043013569766,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0,2.08698024724694,0,1.14241563650639,0,5.45545977607678,0,2.32016879939247,15.1276437705474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0.636008701306837,0,0,1.05802783107205,15.6185193450132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,6.01682626794058,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,20.8408694923504,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,23.2339554837521,0,0,12.7842220871329,0,0,0.142953088353313,0,0,0,2.40513409419076,0.207216164163037,0.3414369541879,0,0,0,0,55.4637035750117,0,0,0,0,0,0,5.17943069750316,0.923965261706223,0,0.485710993059139,0,0,0,0,0,0,19.6022361594179,5.46398901259893,0,29.9080952539765,0,0,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,11.6853822119443,0.458729283404541,0,0,0,0,20.6320467801006,0,0,0,0,0.109265571963696,0,0.509944148709909,0,0,0,12.655042602446,0,0,0.103432995861895,0.852935927603924,0.23806443146374,0,0.0620747142958579,0,0.318235791390825,0,0.435433495793923,0,0.0673520530145875,2.65372159952903,1.66330178273007,0,0,0,0,11.7320471201727,7.09000376260625,16.2758471326295,2.66302709674205,2.41528552309231,0 | |||
|short_description=p@chr2:74135827..74135858,+ | |||
}} |
Revision as of 03:56, 21 January 2014
Short description: | p@chr2:74135827..74135858, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74135827..74135858, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.21e-10 | 4 |
prostate stromal cell | 3.70e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.41e-13 | 59 |
reproductive system | 1.41e-13 | 59 |
intestine | 5.16e-13 | 17 |
umbilical artery | 1.21e-10 | 4 |
gastrointestinal system | 3.78e-10 | 25 |
male organism | 4.32e-10 | 22 |
male reproductive system | 4.32e-10 | 22 |
reproductive organ | 9.73e-10 | 48 |
adult organism | 1.84e-09 | 114 |
hindgut | 1.85e-09 | 19 |
male genital duct | 3.92e-09 | 3 |
internal male genitalia | 3.92e-09 | 3 |
large intestine | 3.59e-08 | 11 |
cloaca | 4.07e-08 | 14 |
anal region | 4.07e-08 | 14 |
embryonic cloaca | 4.07e-08 | 14 |
terminal part of digestive tract | 4.07e-08 | 14 |
primitive urogenital sinus | 4.07e-08 | 14 |
proctodeum | 4.07e-08 | 14 |
digestive system | 1.44e-07 | 145 |
digestive tract | 1.44e-07 | 145 |
primitive gut | 1.44e-07 | 145 |
genitourinary system | 1.69e-07 | 15 |
intermediate mesoderm | 1.96e-07 | 28 |
sex gland | 3.19e-07 | 12 |
male reproductive gland | 3.19e-07 | 12 |
colon | 3.51e-07 | 9 |
duct of male reproductive system | 6.49e-07 | 4 |
endoderm-derived structure | 8.05e-07 | 160 |
endoderm | 8.05e-07 | 160 |
presumptive endoderm | 8.05e-07 | 160 |
subdivision of digestive tract | 9.03e-07 | 118 |