FFCP PHASE1:Hg19::chr2:154335268..154335286,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56475 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24201 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NS64 | |||
|association_with_transcript=35bp_to_ENST00000325926,NM_019845,uc002tyq.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_RPRM_5end | |||
|id=chr2:154335268..154335286,- | |||
|ontology_enrichment_celltype=CL:0000047!2.12e-08!8;CL:0002319!2.64e-08!25;CL:0000540!4.98e-07!6;CL:0000031!4.98e-07!6;CL:0000404!4.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.78e-10;6!CL:0000404;5.78e-10;6!CL:0002319;5.89e-10;25!CL:0002322;3.15e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.83e-10,6;CL:0000031,4.83e-10,6;CL:0000404,4.83e-10,6;CL:0000047,5.75e-10,8;CL:0002319,5.76e-10,25;CL:0002322,3.21e-09,5;CL:0000133,7.96e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;5.78e-10;6!UBERON:0006601;7.72e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.92e-43!86;UBERON:0000073!3.80e-40!94;UBERON:0001016!3.80e-40!94;UBERON:0001017!5.08e-39!82;UBERON:0003075!3.00e-35!86;UBERON:0007284!3.00e-35!86;UBERON:0001049!4.64e-34!57;UBERON:0005068!4.64e-34!57;UBERON:0006241!4.64e-34!57;UBERON:0007135!4.64e-34!57;UBERON:0002346!1.05e-33!90;UBERON:0007023!2.17e-33!115;UBERON:0003056!9.72e-32!61;UBERON:0000955!5.29e-29!69;UBERON:0006238!5.29e-29!69;UBERON:0002780!1.22e-28!41;UBERON:0001890!1.22e-28!41;UBERON:0006240!1.22e-28!41;UBERON:0003080!1.32e-27!42;UBERON:0002616!1.51e-27!59;UBERON:0004121!8.96e-27!169;UBERON:0000924!3.49e-26!173;UBERON:0006601!3.49e-26!173;UBERON:0001893!1.48e-25!34;UBERON:0002020!3.54e-25!34;UBERON:0003528!3.54e-25!34;UBERON:0002791!9.79e-25!33;UBERON:0001869!1.88e-24!32;UBERON:0000153!2.86e-24!129;UBERON:0007811!2.86e-24!129;UBERON:0000033!3.00e-24!123;UBERON:0000956!9.37e-24!25;UBERON:0000203!9.37e-24!25;UBERON:0002619!1.11e-21!22;UBERON:0001950!3.05e-20!20;UBERON:0000064!3.92e-09!219;UBERON:0001871!6.64e-09!7;UBERON:0000475!6.50e-08!365;UBERON:0000468!8.33e-08!659;UBERON:0003076!1.06e-07!15;UBERON:0003057!1.06e-07!15;UBERON:0000922!3.22e-07!612;UBERON:0000062!3.74e-07!511;UBERON:0000020!5.51e-07!23;UBERON:0000200!8.25e-07!6;UBERON:0000970!8.77e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.45e-33;25!UBERON:0000203;1.45e-33;25!UBERON:0002619;2.59e-30;22!UBERON:0001869;4.53e-30;32!UBERON:0001893;8.12e-29;34!UBERON:0002791;1.61e-28;32!UBERON:0001950;4.66e-28;20!UBERON:0003528;3.56e-27;34!UBERON:0002020;3.56e-27;34!UBERON:0002780;1.68e-26;41!UBERON:0001890;1.68e-26;41!UBERON:0000073;4.15e-21;53!UBERON:0002616;4.15e-21;53!UBERON:0000955;1.06e-16;68!UBERON:0001017;1.04e-15;75!UBERON:0001016;1.09e-11;83!UBERON:0001871;2.02e-11;6!UBERON:0000200;9.68e-10;6!UBERON:0000922;1.56e-09;49!UBERON:0000966;3.39e-09;5!UBERON:0005388;3.39e-09;5!UBERON:0001802;3.39e-09;5!UBERON:0002021;7.93e-09;5!UBERON:0000349;7.75e-08;5!UBERON:0007023;7.04e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.99e-45,81;UBERON:0001016,1.50e-40,89;UBERON:0003056,3.04e-37,61;UBERON:0001049,1.53e-36,56;UBERON:0005068,1.53e-36,56;UBERON:0006241,1.53e-36,56;UBERON:0007135,1.53e-36,56;UBERON:0002780,2.48e-36,41;UBERON:0001890,2.48e-36,41;UBERON:0003080,2.48e-36,41;UBERON:0006240,2.48e-36,41;UBERON:0000073,5.18e-35,53;UBERON:0002616,5.18e-35,53;UBERON:0003075,6.52e-35,82;UBERON:0007284,6.52e-35,82;UBERON:0000955,1.03e-34,68;UBERON:0006238,1.03e-34,68;UBERON:0000956,1.40e-33,25;UBERON:0000203,1.40e-33,25;UBERON:0001869,1.66e-33,32;UBERON:0001893,3.64e-33,34;UBERON:0002346,1.45e-32,86;UBERON:0002791,5.48e-31,32;UBERON:0003528,6.93e-31,34;UBERON:0002020,6.93e-31,34;UBERON:0002619,2.46e-30,22;UBERON:0001950,4.42e-28,20;UBERON:0010371,7.58e-27,104;UBERON:0004121,2.57e-25,171;UBERON:0000924,2.57e-25,171;UBERON:0006601,2.57e-25,171;UBERON:0007023,2.87e-23,114;UBERON:0011216,3.28e-21,223;UBERON:0010314,6.08e-18,132;UBERON:0001871,1.76e-11,6;UBERON:0000200,1.05e-09,6;UBERON:0002021,7.82e-09,5;UBERON:0000922,3.12e-08,592;UBERON:0000349,6.28e-08,5;UBERON:0000966,1.47e-07,6;UBERON:0005388,1.47e-07,6;UBERON:0001802,1.47e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0,5.01527554364941,1.14494394852423,1.50561867580173,5.52387614217132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0,0,3.18565414324097,3.90650072313851,0.950452044448374,0,0,0,0.947109008176067,3.28451198768419,0,0,0,0,0,0,0,0,0,0,0,2.55244006342983,0.665188192387692,1.84453049955565,3.66741411393595,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,1.06778694409284,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0.302256294682921,0,0,0,0,7.07447495551653,8.48190517257506,7.66880022938821,7.87824018116815,15.1392510525377,7.2995471815166,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,12.4045533323332,0,0,0,0,3.95102198979638,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.508189248444927,10.4111883086097,2.31986643833309,17.756724125441,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,7.94995387860806,20.3369080333818,19.8480820745225,0.309123034943167,0.732555718546747,0.82509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,5.12755541411871,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,5.96488588659779,12.9415863097672,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,1.479651084554,0,1.11136990144637,7.75466196876175,5.19501349706367,109.787588900657,2.86470537193757,0,0,0.1137934482855,1.27126825146383,0,2.06846023944879,0,0.868124974666461,0,1.4471572635049,0,0.552896299656123,0.591095237907095,4.38770794307945,0,0.139423744278603,5.38651809526579,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,1.51472047819464,2.98578579323551,1.68069372556344,0,0,0,0,1.14581926067151,0,0.937057782901357,0,0,0,3.94584402849391,2.41981432097328,92.7400467740385,0.063186579628488,3.60776206594782,11.3020128622999,0,0,0,0,0.569219092059585,0,0,0,0,4.71762004253481,0.343972064943233,0.0967563312890851,0.146178634172371,0.0821154570532092,0.969890164884194,0,3.38971111170799,0,0,5.76128243198496,0,0.64127056201227,0,0,0,0,14.585574818267,0,0,0,0,0,0,1.15580235960608,0,0.410716136675979,0,0.429765441419957,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,3.18091875923721,2.99647493445466,18.9688715188723,9.7652999984036,12.8786504789047,0.2249738915515,0,5.95345655248642,0,0.630445658393585,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,2.6446520348538,0.171086837884329,0,0.320362237703084,0.314408610199332,0,0,0,0,0,0,0,0,0,0.314108192500469,4.43034089983493,5.85726071529423,7.38626491168349,4.58727356552057,3.10601344303186,1.30402446176905,8.992661270855,0,0,0,0,0.936669811613763,7.53589348776291,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00436455849792,4.95889154733902,0,0.231522474323834,0,0,7.41123473186333,0,0,0,0,0,0,0,5.3920790099175,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,4.47630299562781,0.539124056983409,0.314531883711793,0,0,0.425149840203366,0,0,0,0,20.8148394554222,0,0,2.89031512934068,5.6678630530234,7.18352365757181,4.51256001329661,138.387361225723,5.46342294467321,2.90656162137332,0,0,0.589848616738702,0,0,0,0,0,3.91093707416138,0,0,0,0,0,4.05225507710368,0.781078098613847,4.34042272652487,5.00984900531864,45.9458839575304,2.74128883428591,0,0,0,3.21421101526972,4.03540466662589,2.42786241694653,2.73194629621557,0.266107110487916,0,1.02892805662451,0.543757863814654,5.19604911146508,0,0,9.18369186351014,1.25692471932802,0,6.39211104356647,0,0,4.00268647389276,7.90068058663633,0,0.173858272302579,0,0,0,0,4.73250094702305,0,0,2.11693525095465,0,0,0,0,0,0,0,0,3.4794432940146,1.45713297917742,3.74303141539369,0,0,2.03302947670128,5.82684738750774,0.301925687133347,0.308696632431779,0.874238242015829,5.64380755633827,3.67722482630858,1.64973582971138,0.981542335574726,1.78227840196252,10.1437374620016,0,0.187967835959707,0.257831551894309,0,0,0,0,1.46067277649303,3.66983426723633,0.716697915757256,18.1437296522162,5.30333623489135,68.943409073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| |||
|short_description=p1@RPRM | |||
}} |
Revision as of 06:04, 21 January 2014
Short description: | p1@RPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPRM_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 35bp_to_ENST00000325926, NM_019845, uc002tyq.1_5end |
EntrezGene: | RPRM |
HGNC: | 24201 |
UniProt: | Q9NS64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.83e-10 | 6 |
neuroblast | 4.83e-10 | 6 |
electrically signaling cell | 4.83e-10 | 6 |
neuronal stem cell | 5.75e-10 | 8 |
neural cell | 5.76e-10 | 25 |
embryonic stem cell | 3.21e-09 | 5 |
neurectodermal cell | 7.96e-07 | 59 |