FFCP PHASE1:Hg19::chr2:234526341..234526346,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=54576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12540 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HAW9,Q5DSZ6 | |||
|association_with_transcript=50bp_to_ENST00000373450,NM_019076,uc002vup.2,uc010zmv.1_5end | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_1_at_UGT1A8_5end | |||
|id=chr2:234526341..234526346,+ | |||
|ontology_enrichment_celltype=CL:0000319!8.22e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.00e-13;4!CL:0000077;1.72e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.00e-13,4;CL:0000077,1.72e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!3.08e-11!1;DOID:3149!3.08e-11!1;DOID:3030!8.22e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.99e-50;1!DOID:3149;3.99e-50;1!DOID:4929;5.56e-26;2!DOID:3451;7.14e-26;2!DOID:4159;7.14e-26;2!DOID:0060122;7.14e-26;2!DOID:1793;1.00e-13;4!DOID:170;1.32e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.99e-50,1;DOID:3149,3.99e-50,1;DOID:4929,5.56e-26,2;DOID:3451,7.14e-26,2;DOID:4159,7.14e-26,2;DOID:0060122,7.14e-26,2;DOID:1793,1.00e-13,4;DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002372!5.57e-11!1;UBERON:0001961!5.57e-11!1;UBERON:0001744!5.57e-11!1;UBERON:0001735!5.57e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;1.13e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.13e-13,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0.709251365692784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0,0,0,0,0,10.2496607435179,0,0.911579868532147,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0,0,0,0,0,0,0.471464371102113,0.215166616178029,0,0,0,0,3.14388207373054,0,0,0,0,0,0 | |||
|short_description=p1@UGT1A8 | |||
}} |
Revision as of 09:17, 21 January 2014
Short description: | p1@UGT1A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UGT1A8_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 50bp_to_ENST00000373450, NM_019076, uc002vup.2, uc010zmv.1_5end |
EntrezGene: | UGT1A8 |
HGNC: | 12540 |
UniProt: | Q9HAW9Q5DSZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.00e-13 | 4 |
mesothelial cell | 1.72e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.99e-50 | 1 |
keratoacanthoma | 3.99e-50 | 1 |
tubular adenocarcinoma | 5.56e-26 | 2 |
skin carcinoma | 7.14e-26 | 2 |
skin cancer | 7.14e-26 | 2 |
integumentary system cancer | 7.14e-26 | 2 |
pancreatic cancer | 1.00e-13 | 4 |
endocrine gland cancer | 1.32e-09 | 6 |