FFCP PHASE1:Hg19::chr20:61273815..61273833,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10953 | |||
|TSSclassifier=strong | |||
|UniProt=C9JL32 | |||
|association_with_transcript=-5bp_to_ENST00000370512_5end | |||
|description=CAGE_peak_2_at_SLCO4A1_5end | |||
|id=chr20:61273815..61273833,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.84e-12!254;CL:1000497!9.78e-07!18;CL:0002518!9.78e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.04e-08;17!CL:0002518;1.04e-08;17!CL:1000507;5.40e-08;10!CL:1000494;5.40e-08;10!CL:1000449;1.01e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.04e-15,253;CL:1000497,1.23e-08,17;CL:0002518,1.23e-08,17;CL:1000507,7.68e-08,10;CL:1000494,7.68e-08,10;CL:1000449,1.28e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.93e-08;29 | |||
|ontology_enrichment_disease=DOID:162!7.94e-34!235;DOID:14566!6.27e-33!239;DOID:0050687!8.01e-22!143;DOID:305!1.64e-18!106;DOID:2531!1.62e-15!51;DOID:0060083!1.62e-15!51;DOID:0050686!5.15e-15!137;DOID:1240!1.64e-14!39;DOID:8692!1.17e-12!31;DOID:299!9.42e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.58e-14;31!DOID:1240;1.01e-13;39!DOID:2531;4.98e-12;51!DOID:0060083;4.98e-12;51!DOID:299;6.64e-08;25!DOID:0050687;5.00e-07;143!DOID:305;7.88e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-41,235;DOID:14566,2.44e-40,239;DOID:0050687,1.20e-25,143;DOID:305,2.07e-22,106;DOID:0050686,1.08e-18,137;DOID:2531,2.34e-18,51;DOID:0060083,2.34e-18,51;DOID:1240,5.80e-17,39;DOID:8692,1.43e-14,31;DOID:299,7.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.27e-07!27;UBERON:0003918!2.27e-07!27;UBERON:0005095!2.27e-07!27;UBERON:0007687!2.27e-07!27;UBERON:0001041!3.29e-07!98;UBERON:0005177!3.68e-07!107;UBERON:0000489!6.33e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.89e-09;24!UBERON:0011143;2.89e-09;24!UBERON:0000489;1.75e-08;29!UBERON:0006554;3.34e-08;30!UBERON:0001008;3.34e-08;30!UBERON:0004211;5.40e-08;10!UBERON:0009773;5.40e-08;10!UBERON:0001231;5.40e-08;10!UBERON:0004810;5.40e-08;10!UBERON:0006555;1.01e-07;15!UBERON:0004819;1.01e-07;15!UBERON:0001285;1.01e-07;15!UBERON:0007684;1.01e-07;15!UBERON:0001737;5.41e-07;9!UBERON:0001557;5.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,9.66e-09,26;UBERON:0003918,9.66e-09,26;UBERON:0011143,9.66e-09,26;UBERON:0005095,9.66e-09,26;UBERON:0007687,9.66e-09,26;UBERON:0005177,1.35e-08,101;UBERON:0000489,4.77e-08,31;UBERON:0004810,7.68e-08,10;UBERON:0004211,1.28e-07,15;UBERON:0009773,1.28e-07,15;UBERON:0001231,1.28e-07,15;UBERON:0001285,1.28e-07,15;UBERON:0007684,1.28e-07,15;UBERON:0004208,1.28e-07,15;UBERON:0005172,4.30e-07,54;UBERON:0005173,4.30e-07,54;UBERON:0001737,5.17e-07,9;UBERON:0006555,9.21e-07,16;UBERON:0004819,9.21e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.982935746006035,1.39560233594486,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0.572471974262113,0.136874425072884,0.125542639594803,5.57817861960044,5.91124244039609,6.53299484903538,0,0.383829398097213,1.23852898652861,0,1.204823675113,0,4.10576163075599,8.38798471675787,2.05520307534393,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0.581592955118259,0,0.970336244751265,0.232429036905685,0,0,0.28769239232215,1.5369642391746,0.47296445977717,0.689491361473237,1.29096936716765,1.35426486594342,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0.989553900560148,1.19678194572979,1.70489900213078,0,1.13477044938228,0,1.7587406567972,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,1.91136614062614,2.64342657158052,5.60508562981536,3.95076127162616,0,0.786021525498329,0.616804496998528,3.00935691703221,1.62961133316795,0.473447805734733,0,1.00269411196656,0.589211814949674,0.221533894583621,0.812411591295047,2.0494611156108,1.56071217071854,1.64437904603676,2.21080014228679,1.73881851441031,0.296573126324121,0,0,2.26618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0.383587685530591,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.785874452986276,4.00724817121796,1.48313777113772,0.649094787309367,0.348259474598534,1.06366368415092,0.238490624305342,0,0.74291500265913,1.59009925893364,0.860234595106124,1.73570250803797,1.13061588384802,1.25849830862972,2.47606237746061,1.67195973229448,0.516833518338658,1.06729878806013,0,0,1.52054421143703,0.24406205754817,0.735326160691737,0,1.51809538082936,2.2452937262617,4.61707069981621,3.06633274931766,0,2.01521918323448,0,0,0.872188104285069,0,0,0,2.0078563452417,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,0.151357427644931,0,0.468642863667593,0.312160076830321,3.99330275081114,2.24173020827702,0.352303495931295,0.485618833104395,0.98315564691574,0.816616685019573,2.94802361548243,0.413303124703062,0,0,0,0,3.70339450698946,4.8796222750066,1.38532057742091,0,0,0,0.680593098960126,0.179389635688862,0,0,0,0.103052529238439,0,0,0.843881661206331,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,1.09098448236334,0,3.29329006549908,1.85541675650079,1.85910308591229,1.55491582523056,2.52320850875628,2.91981887260664,0,0,1.38134921352481,0,0,6.15195360207188,7.58631105351458,6.7483088367375,7.16910822760561,9.58669554006587,8.54174228799948,6.87639671616838,7.45641567476315,5.77120735419586,2.95262181849859,2.80483547606892,0.8231480226628,0,0,1.96565443335525,1.18157981336281,11.4780405847809,4.18160691046586,0.514703430895577,0.109750285408626,2.24803506515239,5.5290934826397,1.85176890317059,0.977424915930974,0,2.88662684050547,0.463721619900307,0,0,0,0,5.53143078571493,4.29243081047436,1.23108503043699,3.7440682422278,1.78357394746474,0,0,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0.088048434013226,0.829312462163088,3.60299883542404,0.6312121671319,7.49275152647595,14.5155601712146,1.17217447210047,3.4214489204541,4.01027221542962,3.60411669412701,2.5724378936752,0.560655421726804,0,0.1466765716419,0.387815147273333,0,0,0,0,1.02882949704857,1.41849132023278,0,0.142977993658148,1.62786481617433,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,2.85273810081437,0.289562613335158,0.821905290201534,0.358121926479791,4.81966119172167,0.788123040807709,0,0.385029108839245,0.254094624222463,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0.206768026122887,0.647142602455851,0.533637789017222,3.03127571446259,0,0.604780586659361,0,0.153461973288062,0,0,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.492762936082855,0,0.232420756919918,5.438675231623,0,1.93370076765382,0.459257792658427,1.0925470080403,0.131124414959424,17.5967849033891,7.39347236202382,15.6869953835371,16.0753147118587,5.17202981575091,2.27466768141793,2.55140557914773,2.59099099322567,1.54227252690289,4.06419656315779,4.01351819083883,14.0181950174771,14.1282921517883,7.61174166055406,0.219259876645935,0,3.07740150139667,2.95213181129735,0.650756789328606,0.618246069886334,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.689182862422653,0,0.435050081742686,0.852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0,0,0,1.02359116524534,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0.421258456238981,0.975267478179181,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0.143411352204052,0,0.35667105148125,1.06428319221179,0,0,3.79473173765715,2.79947776195986,0.673554789078584,0,1.08890984861323,0.941438007767792,0.43050537267123,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,2.67060177818683,1.92495971052672,9.55656842326024,5.20248890352012,4.76088402822268,0,5.89877209096643,8.58191297161111,6.12817184423573,8.46694330895532,4.22008522356922,4.7735520279288,5.02116293873023,12.3777117660688,15.038068625404,5.0787533340481,6.58411107925168,5.65039180134933,6.38769356535489,2.06103206853459,3.07240764308458,2.68411329470899,2.33588798396672,4.88470238505101,0,6.15436994738562,7.57275899732753,3.99686361597384,5.63948020351398,5.05279459102193,2.4906390476222,4.61169982648151,5.6836125981514,13.3543988999014,3.34242278632766,0.593929361665277,3.37876772309155,2.98244294329889,1.68803299692615,1.33570446027487,6.42735109484362,3.3780065300479,1.19548792950642,1.38141957765574,1.76352923497993,0,7.01583391128096,0,2.3365771298305,2.86433879480975,2.55786185113436,3.05794557474494,2.3948309234694,0,1.93866549219044,0.927680981618513,1.99613798001194,3.9064164162785,2.18649999990489,2.89999830173917,9.55864965598197,4.32231205497703,2.83665218121524,11.0317879437269,6.12369688104834,1.90987494426621,4.42870692906919,1.68835014075571,1.52581736317083,3.42795705786796,3.25102380848902,2.4132393686937,1.52513848926586,1.25481369850743,1.53900517007594,0,9.91424788868659,3.8595787096202,0.325942115766024,1.5950057986596,1.00757352742049,2.13213910407454,3.06579894587209,7.53505230696119,3.15802195610297,8.1214437822185,6.86218870112088,6.20939871810618,7.77990304169159,5.56278026431325,13.9258722588498,5.38668266925187,1.83758992864123,0.216388639742091,0.995261931078505,1.50377859655677,1.83309043480088,2.96521128680622,8.15521997046919,6.16089502082187,0.337005664903385,0.802577647298789,0.937057782901357,6.93328199019531,1.17398771359254,4.61282721114776,1.57833761139756,2.41981432097328,1.53036380815245,1.01098527405581,1.80388103297391,4.35490403868438,9.96980809060778,9.59876672038947,7.22045712336618,4.77889719091835,5.12297182853627,0.970722711091971,0,2.15583274311631,4.87531556850254,0.698906672968121,9.28724575346729,9.57887679761943,8.69762873325608,9.93597030343832,1.06687918137261,4.67757471464951,5.42353777873278,4.79646736263628,12.9164497606943,2.34249945036751,4.10657903743086,0.320635281006135,0.426905989478705,3.19695375331408,7.63679210916762,2.40526851948423,0,12.8208770209453,11.6797383431507,1.17847017308398,3.80531777006119,2.196659772559,1.12198039399954,0,0,0.958337652243951,17.8845223293761,0,8.93817004549669,0.279282401272254,0.458320848023367,7.17873024576814,1.39775300349294,2.57535628881943,3.57074331906996,1.94832070211506,0,11.6495949527454,9.37519869455961,9.97231886412114,10.919374104378,3.6418168160457,0,2.38568906942791,2.31545790389679,2.57205037544031,2.75078873194468,3.32352270423348,2.0247650239635,3.86900977278975,1.15424157650247,1.0063040627978,3.78267395036151,1.88836517285993,10.137632305863,7.17149357331379,1.72723677587501,0,0.662091970365432,2.034148301238,0,0,0.653174720218818,0,6.81367922219513,0,2.37955392192264,0.879313402068495,1.32506888912221,2.06852730178481,3.43804764530994,0.171086837884329,7.75296524548339,3.84434685243701,3.30129040709298,1.24271716604159,0.992332043623902,1.58089305518355,2.31405936923702,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0.471162288750703,2.65820453990096,2.44052529803926,3.755727921195,2.86704597845036,2.10765197920019,1.30402446176905,0,9.24855018919589,0.454947352624943,3.42558400253961,3.99951893486892,2.34167452903441,6.08668320165466,0.149254802886874,0,0,0.757612021100357,0.251567901752575,0,0,0.604923695052956,0,0.295710299979268,0.159296767163702,0,0,0,0,0.521745061811734,0,0,1.62748293281865,0,0.859284456339908,0,0.398095888698616,0,0,0,1.26184898228651,2.11881813448034,0.643324774124777,3.65392008751296,1.58694147858591,0.463044948647668,1.22368352253234,1.4327107286519,2.16161013012681,1.53498834705095,4.41722864864703,1.54331230616732,3.88567613502067,2.81865670446741,5.87231580943038,2.43087964941906,3.594719339945,0.389720617678777,0,0,3.93131818615695,0,5.91673945404156,1.39991177098451,8.21526318644885,0.344429959321631,0.567515953566836,1.47284760201473,1.39879507719444,0,4.85998610953876,4.42081726726395,6.44790361609175,0,9.84448673733346,3.61377364172861,4.33775174906508,6.70373901567893,0,5.04715168008021,0,0.352675943690684,0,1.34881372702565,5.6678630530234,3.35231104020018,1.43581454968528,0.756215088665154,2.90460460349715,2.90656162137332,2.85538840518309,1.37406805901436,8.13991091099409,0,4.85207797831421,0,15.8782782993823,3.97832444232549,0.676892955143315,0,1.56302802246618,3.66669372273991,2.62035068016155,2.06998520703863,2.566428215499,2.34323429584154,3.51367554052013,2.28296916698065,1.09394961803644,0.548257766857182,0.992422356778588,0.527613733078862,1.02209942111676,13.9282477328355,4.03540466662589,0.606965604236632,1.13831095675649,0.443511850813194,6.1074013404563,0.342976018874837,0.883606528698812,2.36781984826257,8.15537502099381,8.45358654379725,0.78493092850514,0.785577949580009,3.08299379645168,0,5.83004496290278,5.7330202546446,3.50235066465616,12.7991025503509,4.88213986546126,3.99874026295933,0.801711364730253,2.90102629828252,2.21934020222135,2.07377898544228,0,2.60330401607244,1.95990830946063,1.69354820076372,4.1239236337929,5.89392132762208,4.77769469488717,2.23710863595585,10.502074996831,2.31644057466312,1.29485767437579,1.84793052341245,0,0.485710993059139,1.16969731731053,2.98426162742052,0.356760272332706,0,6.15666893774403,2.56636834063345,0.926089897295336,0.655678681511872,1.41095188908457,0.245148321753905,4.24217784782927,1.37415926980462,0.594092800654172,0,0,2.06764619555678,2.57831551894309,3.89770508107223,3.03541695629618,5.99921281916676,3.20965466756673,4.3820183294791,1.37618785021362,1.00337708206016,1.41994405973866,1.76777874496378,0.872701380680755,0,0.371995018166751,0,0,0,0,0,2.95767606251747,5.61156551057677,2.38926738790597,1.75495277504663,1.36401656792831,1.87574891109325,0.829169439458779,1.34462894620464,0.639701945702943,0.476128862927481,1.16260037704811,1.55186785739645,4.03674705290208,0.381882949668989,0,1.30630048738177,0.684466602170562,1.41439311330634,2.29511057256564,1.33064142618405,4.8027928480475,1.3874554964103,1.9307228228694,8.44356899801917,0,0.611207220914332,0.813792356631477,1.99727032255654,0.402547587182052,4.48795889224526 | |||
|short_description=p2@SLCO4A1 | |||
}} |
Revision as of 12:40, 21 January 2014
Short description: | p2@SLCO4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLCO4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000370512_5end |
EntrezGene: | SLCO4A1 |
HGNC: | 10953 |
UniProt: | C9JL32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.04e-15 | 253 |
kidney cell | 1.23e-08 | 17 |
kidney epithelial cell | 1.23e-08 | 17 |
kidney tubule cell | 7.68e-08 | 10 |
nephron tubule epithelial cell | 7.68e-08 | 10 |
epithelial cell of nephron | 1.28e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 9.66e-09 | 26 |
kidney mesenchyme | 9.66e-09 | 26 |
upper urinary tract | 9.66e-09 | 26 |
kidney rudiment | 9.66e-09 | 26 |
kidney field | 9.66e-09 | 26 |
trunk region element | 1.35e-08 | 101 |
cavitated compound organ | 4.77e-08 | 31 |
nephron tubule epithelium | 7.68e-08 | 10 |
nephron epithelium | 1.28e-07 | 15 |
renal tubule | 1.28e-07 | 15 |
nephron tubule | 1.28e-07 | 15 |
nephron | 1.28e-07 | 15 |
uriniferous tubule | 1.28e-07 | 15 |
nephrogenic mesenchyme | 1.28e-07 | 15 |
abdomen element | 4.30e-07 | 54 |
abdominal segment element | 4.30e-07 | 54 |
larynx | 5.17e-07 | 9 |
excretory tube | 9.21e-07 | 16 |
kidney epithelium | 9.21e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-41 | 235 |
disease of cellular proliferation | 2.44e-40 | 239 |
cell type cancer | 1.20e-25 | 143 |
carcinoma | 2.07e-22 | 106 |
organ system cancer | 1.08e-18 | 137 |
hematologic cancer | 2.34e-18 | 51 |
immune system cancer | 2.34e-18 | 51 |
leukemia | 5.80e-17 | 39 |
myeloid leukemia | 1.43e-14 | 31 |
adenocarcinoma | 7.41e-08 | 25 |