FFCP PHASE1:Hg19::chr21:22370717..22370738,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4685 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7657 | |||
|TSSclassifier=strong | |||
|UniProt=O15394 | |||
|association_with_transcript=84bp_to_ENST00000400546,NM_004540,uc002yld.1,uc011acb.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_NCAM2_5end | |||
|id=chr21:22370717..22370738,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.64e-09!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.23e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;7.23e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.86e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.92e-37!94;UBERON:0001016!2.92e-37!94;UBERON:0002346!6.88e-37!90;UBERON:0001017!2.72e-36!82;UBERON:0005743!1.52e-35!86;UBERON:0001049!1.20e-34!57;UBERON:0005068!1.20e-34!57;UBERON:0006241!1.20e-34!57;UBERON:0007135!1.20e-34!57;UBERON:0003075!2.93e-34!86;UBERON:0007284!2.93e-34!86;UBERON:0002616!4.36e-34!59;UBERON:0000955!1.52e-31!69;UBERON:0006238!1.52e-31!69;UBERON:0007023!1.36e-30!115;UBERON:0000924!7.86e-28!173;UBERON:0006601!7.86e-28!173;UBERON:0003080!1.31e-26!42;UBERON:0002780!1.64e-26!41;UBERON:0001890!1.64e-26!41;UBERON:0006240!1.64e-26!41;UBERON:0004121!1.12e-25!169;UBERON:0003056!9.75e-24!61;UBERON:0002020!1.05e-22!34;UBERON:0003528!1.05e-22!34;UBERON:0001893!1.22e-22!34;UBERON:0002791!5.54e-22!33;UBERON:0000033!1.35e-21!123;UBERON:0001869!3.52e-21!32;UBERON:0000153!5.75e-21!129;UBERON:0007811!5.75e-21!129;UBERON:0002619!9.18e-17!22;UBERON:0000956!2.38e-16!25;UBERON:0000203!2.38e-16!25;UBERON:0001950!2.68e-15!20;UBERON:0000025!1.49e-14!194;UBERON:0000475!8.53e-14!365;UBERON:0004111!2.45e-12!241;UBERON:0000477!5.64e-12!286;UBERON:0000483!2.00e-11!309;UBERON:0000119!2.08e-11!312;UBERON:0000481!2.79e-09!347;UBERON:0003076!4.33e-09!15;UBERON:0003057!4.33e-09!15;UBERON:0000468!3.54e-08!659;UBERON:0002420!5.77e-08!9;UBERON:0007245!5.77e-08!9;UBERON:0010009!5.77e-08!9;UBERON:0010011!5.77e-08!9;UBERON:0000454!5.77e-08!9;UBERON:0004732!7.42e-08!13;UBERON:0002308!7.51e-08!9;UBERON:0000125!7.51e-08!9;UBERON:0004733!4.03e-07!12;UBERON:0002028!4.03e-07!12;UBERON:0007277!4.03e-07!12;UBERON:0001871!7.04e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.89e-24;41!UBERON:0001890;8.89e-24;41!UBERON:0003528;1.29e-23;34!UBERON:0002020;1.29e-23;34!UBERON:0001893;1.38e-23;34!UBERON:0002791;1.53e-23;32!UBERON:0001869;1.98e-23;32!UBERON:0000073;4.91e-22;53!UBERON:0002616;4.91e-22;53!UBERON:0002619;5.64e-22;22!UBERON:0001950;5.29e-20;20!UBERON:0000956;1.65e-19;25!UBERON:0000203;1.65e-19;25!UBERON:0001017;3.88e-19;75!UBERON:0000955;2.92e-17;68!UBERON:0001016;4.27e-17;83!UBERON:0002420;3.72e-10;9!UBERON:0007245;3.72e-10;9!UBERON:0010009;3.72e-10;9!UBERON:0010011;3.72e-10;9!UBERON:0000454;3.72e-10;9!UBERON:0000125;5.26e-10;9!UBERON:0002308;5.26e-10;9!UBERON:0007023;1.65e-09;114!UBERON:0011216;1.70e-08;132!UBERON:0009663;3.77e-08;7!UBERON:0004732;4.03e-08;13!UBERON:0001871;8.91e-08;6!UBERON:0004733;3.46e-07;12!UBERON:0002028;3.46e-07;12!UBERON:0000200;6.10e-07;6!UBERON:0002298;7.11e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-45,89;UBERON:0002346,1.53e-43,86;UBERON:0001017,1.01e-42,81;UBERON:0001049,1.17e-41,56;UBERON:0005068,1.17e-41,56;UBERON:0006241,1.17e-41,56;UBERON:0007135,1.17e-41,56;UBERON:0003075,4.23e-40,82;UBERON:0007284,4.23e-40,82;UBERON:0000073,7.99e-39,53;UBERON:0002616,7.99e-39,53;UBERON:0000955,3.10e-38,68;UBERON:0006238,3.10e-38,68;UBERON:0004121,7.03e-35,171;UBERON:0000924,7.03e-35,171;UBERON:0006601,7.03e-35,171;UBERON:0002780,5.24e-33,41;UBERON:0001890,5.24e-33,41;UBERON:0003080,5.24e-33,41;UBERON:0006240,5.24e-33,41;UBERON:0010371,1.58e-31,104;UBERON:0007023,8.51e-31,114;UBERON:0010314,1.12e-29,132;UBERON:0003056,1.78e-29,61;UBERON:0003528,6.86e-28,34;UBERON:0002020,6.86e-28,34;UBERON:0001893,8.38e-28,34;UBERON:0002791,5.32e-26,32;UBERON:0001869,7.34e-26,32;UBERON:0002619,6.21e-22,22;UBERON:0001950,5.76e-20,20;UBERON:0000956,1.95e-19,25;UBERON:0000203,1.95e-19,25;UBERON:0011216,1.78e-18,223;UBERON:0000025,2.51e-14,192;UBERON:0004111,2.27e-11,240;UBERON:0002420,3.83e-10,9;UBERON:0007245,3.83e-10,9;UBERON:0010009,3.83e-10,9;UBERON:0010011,3.83e-10,9;UBERON:0000454,3.83e-10,9;UBERON:0000125,5.44e-10,9;UBERON:0002308,5.44e-10,9;UBERON:0000483,7.59e-10,306;UBERON:0003076,9.85e-10,15;UBERON:0003057,9.85e-10,15;UBERON:0000119,1.90e-09,309;UBERON:0009663,3.86e-08,7;UBERON:0004732,3.94e-08,13;UBERON:0000923,8.82e-08,560;UBERON:0010316,8.82e-08,560;UBERON:0005291,8.82e-08,560;UBERON:0006598,8.82e-08,560;UBERON:0010317,8.82e-08,560;UBERON:0002532,8.82e-08,560;UBERON:0002050,9.29e-08,564;UBERON:0001871,9.53e-08,6;UBERON:0004733,3.38e-07,12;UBERON:0002028,3.38e-07,12;UBERON:0007277,3.38e-07,12;UBERON:0000200,6.23e-07,6;UBERON:0002298,7.15e-07,6 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.990130823680373,0.994192127183747,2.6893005858071,1.20538905604795,1.46062018077475,1.95173119516203,1.47745269692145,0.816002764977012,0.626909442956176,0.572471974262113,1.36874425072884,0.627713197974014,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0.989553900560148,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,6.03630773733273,2.04580098949649,0.361439152384566,0,0,0,0.486634870302636,6.80650683581289,5.5432349365641,7.46595678391571,6.41797469938792,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,0,0,0,0,0,0.208994966536811,1.55050055501597,3.5576626268671,3.68192674041137,0,0,0,0.367663080345869,0,0.446498641420399,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,3.54565432660823,4.50191214764944,10.3261183469573,5.67469411517371,1.68203280042692,0,0.24666754841716,3.11211035399766,0.404132016209064,2.61539044981534,2.72443369760877,2.88087962239999,0.468642863667593,0,0,0,0.352303495931295,0.161872944368132,0.280901613404497,1.02077085627447,1.71968044236475,0.826606249406124,2.37600571456411,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.500474079487857,0,0.877955241761676,0,1.20190447125277,0.453728732640084,1.61450672119976,0.85422955527427,0.211931901159562,1.50045548042201,1.13357782162283,2.83404594050192,1.8611685633159,1.35021065793013,0.584622030967192,0.757301322732344,1.19664868234989,1.93975268182574,1.77504796258307,1.71278566986988,0.508681776931463,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.725627385107593,0.504641701751257,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,2.95394953340702,0,0,3.25978839567199,0,0,0,0,0.325808305310325,0,1.44331342025273,6.26024186865415,20.7813388797404,0,0,0,2.37061319387782,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,4.95283575478919,0.381988425558278,1.17217447210047,1.71072446022705,7.30075198193597,0.300343057843917,8.00314011365619,0.560655421726804,0,0.8800594298514,4.91232519879556,0,0.845302752556,3.45719551560332,2.08014873822732,0,0,0,0.285955987316295,0.542621605391443,0,0,0,3.16780749173372,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,6.09827098133912,14.3153839243384,6.95959931499926,2.51274398001523,2.55175500661265,0,0,0,1.10422342547226,0,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0.601892199455438,2.27407504055985,3.10419213877515,0.664225598535437,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0.561320188866147,0,0.511707249066704,0.804269605718038,0,1.85051632563187,2.66342587969691,4.10635780069046,0.519254429183621,2.32420756919918,0,0,0,0.918515585316854,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,3.40035338437484,1.19040304263846,2.31026599777646,0,0,1.6068392984416,0.580024309752732,0.616194468458578,0.767518373630648,0.551346289938122,4.18938954986267,0.145016693914229,0.511359764496605,0.623224249527161,0,0,0,0.10115778085555,0.464845549297286,7.55549632393536,4.8792608911242,0.308033580176089,0,0.869932992075073,0.37064843820784,0,2.232950216158,1.58189712359363,5.71890581771475,0.767693373934002,3.42351190427136,4.77304871888905,0.78494864019923,2.87795932133304,7.68703683260953,3.06312246098785,0.202182481573316,0,0,0,0.731140468893853,3.16950440270266,0.682499557039929,6.92886616573193,3.39024349860728,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.92947049429925,1.12678241012897,7.45739031461068,2.45622602532803,0,0,0,0,0,0.699869440489966,0,0,0,3.10674542563371,0,0,0,0,0.507447609232169,0,0,0,0,1.29694662238543,0.540031437238115,0,0.427296284509893,43.3115934868511,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,2.50634477090067,0,0,0.605399121573143,22.9956968352776,0.343505344755765,74.3522649626468,58.3794641599206,65.0711652676443,0,0.278406173895242,0,1.89318974933188,0,0,0,1.61158997199083,11.5292495662038,0,0,0,2.07875276582847,0,80.5259594690701,84.9643275119497,4.45234820091624,0,0.422250816255987,1.39473591775749,3.03912307084262,0,0,2.95403533106567,0,0,0,0,0.789147245095469,0,0,34.8959788594279,53.9910331301974,21.9575177801314,3.64598865519327,26.8502199988321,1.44999915086959,0,0.508507300585533,0,5.51589397186343,15.7466491226957,3.64612489359914,50.4872589913888,54.388993820059,24.4130778107333,30.2987172211555,20.9838809457019,32.9078095730959,0,0,1.76985594558733,0,0.23056390438806,0,0,0,0.183195186803725,0,1.02193298195737,9.73277589649154,1.49590513710141,0,0,0.167821586975843,0.37950746544837,0.476809736941136,0,0,0,0,0.995261931078505,1.59223616106011,8.55442202907076,0,0.123563938946503,0,53.5164995866576,8.82835412028668,74.4960937406578,0,0.19566461893209,0,1.57833761139756,6.04953580243319,49.2777146225089,2.65383634439649,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,3.26773461696071,0,0,0,1.16386819786103,1.85337866052151,3.84167259326905,0,0.794858446811959,59.7020805863936,0,0.320635281006135,1.06726497369676,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,2.02265412931063,81.6571592645314,92.0004146154193,0,0,0,7.26134243307861,2.7499250881402,5.74298419661451,0.199679000498991,1.71690419254628,4.46342914883745,4.43410918412393,2.16179930125442,1.16495949527454,0,0,0,0.0984274815147488,0,69.9802127032187,78.0445517019328,0.160753148465019,0.550157746388935,0.415440338029185,0,1.5476039091159,36.3889844381568,0,0.157611414598396,0.996637174564964,0.422401346077626,9.14365430597508,0,1.42939065274673,1.32418394073086,0.25426853765475,0,0,0.979762080328227,5.98650957812437,1.23138781124008,8.68978911105651,0,0.879313402068495,2.65013777824443,50.1617870682816,68.6287203044561,0,0,4.16470909014009,5.97376359378731,3.72815149812476,0,0,0,0,0,0.5013797880454,0.612691153526923,2.29510841496863,0,45.1894771783163,43.5633765700008,66.6015751358579,31.5375057629539,58.4596101599212,34.0288288118781,1.798532254171,0.37494122388632,2.88133323329131,1.42732666772484,0,0,1.01444720027578,1.79105763464249,1.16856654923612,1.66441758450784,2.27283606330107,7.79860495432983,4.44905610798268,0.457680136793847,6.50292972181928,2.02068360757615,0.443565449968902,1.43367090447332,0.449803112163605,0.621051827505038,0,7.17772629306586,1.5652351854352,0.601030435988874,0.380805212168795,0.813741466409323,0,0.751873899297419,0.464033759878494,0.796191777397232,0,1.37358282073117,1.34699795506368,0,0,1.28664954824955,0,0,8.33480907565802,1.95789363605174,3.58177682162975,0,3.94711289241673,0.530067437837643,0,0.168942440653073,0,0,0,77.2864658088175,0.194860308839388,0,0.327130788511688,0,0,0,0.19998739585493,0.960225567247268,0,0.567515953566836,0,0,4.35454082023081,2.17420431216208,3.77386839888386,20.1300405575547,3.60391806033646,16.1245903456324,11.6916206055926,49.9461129963779,27.9322458986622,1.90802610392051,0,0.80057074828547,1.05802783107205,1.2249819094128,40.5928702609624,43.9259386609313,78.5398586561184,58.2530474443744,29.7444601541627,27.1096429659734,67.0123929372182,102.793982586591,0.196295437002051,0,0,0,1.52552838186867,1.3807198521202,0,1.35378591028663,0,0,0,0,0,38.5639608171033,49.9889983112862,55.1853746658161,37.7958228755685,19.6910931246559,1.64477330057155,1.98484471355718,66.6552016122962,1.78867398695433,14.4639495687137,17.15046983316,2.42786241694653,1.82129753081038,0,1.26757386311357,0,36.8395952734428,29.7292936504078,0,0.222462803784138,0.941917114206168,36.1365856806804,0,18.2631744101899,0,0,4.00268647389276,0,0,0,0.801711364730253,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.513314034281235,4.6392577253528,3.88568794447312,0,0,0.951360726220549,0.45178432815584,0.659643100472575,0.754814217833368,0.463044948647668,3.71551252856727,0,3.92237314806249,1.17838273550813,40.4395442256787,81.6877600899487,35.925736844589,0,0.563903507879121,1.28915775947154,0,0.892769693028288,0,0,4.3820183294791,1.37618785021362,83.7103165604476,0.157771562193185,29.2363407820933,52.3620828408453,7.93540260773101,0,0.462175628631418,0,0,0.218531143927391,0,0,0.26721740526556,1.37842349302267,0,5.15295147884028,5.62724673327975,72.1377412329138,101.984933919829,1.27940389140589,3.09483760902862,0.193766729508018,0.372448285775147,0.224263725161227,0.381882949668989,2.02117188958219,0.435433495793923,1.71116650542641,0,1.2192774916755,7.65118820055831,0,0.426909383510862,0,0,4.69281884806909,0.488965776731466,4.88275413978886,3.32878387092756,0.805095174364105,0 | |||
|short_description=p1@NCAM2 | |||
}} |
Revision as of 13:06, 21 January 2014
Short description: | p1@NCAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCAM2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 84bp_to_ENST00000400546, NM_004540, uc002yld.1, uc011acb.1_5end |
EntrezGene: | NCAM2 |
HGNC: | 7657 |
UniProt: | O15394 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.86e-08 | 10 |