FFCP PHASE1:Hg19::chr22:24891344..24891356,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16297 | |||
|TSSclassifier=strong | |||
|UniProt=B3KNC1,Q9UBR1 | |||
|association_with_transcript=93bp_to_NM_016327_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_UPB1_5end | |||
|id=chr22:24891344..24891356,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.62e-10!4;CL:0000181!5.90e-08!12;CL:0000417!5.90e-08!12;CL:0000668!5.90e-08!12;CL:0000414!5.90e-08!12;CL:0000412!5.90e-08!12;CL:0000182!5.90e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.00e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.00e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.50e-09;31!UBERON:0003918;1.76e-07;10!UBERON:0007687;1.76e-07;10!UBERON:0004161;6.26e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!6.48e-13!55;UBERON:0005173!6.48e-13!55;UBERON:0002107!9.17e-13!19;UBERON:0006925!9.17e-13!19;UBERON:0008836!9.17e-13!19;UBERON:0002417!1.60e-11!61;UBERON:0000916!1.60e-11!61;UBERON:0008835!5.27e-11!22;UBERON:0003894!5.27e-11!22;UBERON:0009854!1.61e-10!23;UBERON:0001242!1.62e-10!4;UBERON:0001262!1.62e-10!4;UBERON:0004786!1.62e-10!4;UBERON:0004808!1.62e-10!4;UBERON:0001277!1.62e-10!4;UBERON:0001301!1.77e-10!1;UBERON:0003929!1.85e-10!54;UBERON:0007499!1.15e-09!25;UBERON:0009497!1.15e-09!25;UBERON:0000015!1.15e-09!25;UBERON:0002423!1.15e-09!25;UBERON:0006235!1.15e-09!25;UBERON:0004161!1.15e-09!25;UBERON:0005057!2.75e-09!26;UBERON:0009856!2.75e-09!26;UBERON:0003350!1.37e-08!5;UBERON:0000160!2.52e-08!27;UBERON:0002365!9.24e-08!31;UBERON:0002330!9.24e-08!31;UBERON:0004921!3.32e-07!129;UBERON:0004185!3.32e-07!129;UBERON:0002368!7.50e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.82e-22;19!UBERON:0006925;5.82e-22;19!UBERON:0002423;1.00e-16;25!UBERON:0002365;1.74e-13;31!UBERON:0002330;1.74e-13;31!UBERON:0005172;1.04e-11;52!UBERON:0005173;1.04e-11;52!UBERON:0002368;1.09e-11;33!UBERON:0000949;1.42e-08;43!UBERON:0002417;2.89e-08;58!UBERON:0000916;2.89e-08;58!UBERON:0001007;2.96e-07;81!UBERON:0002114;9.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.95e-22,19;UBERON:0006925,5.95e-22,19;UBERON:0008836,5.95e-22,19;UBERON:0008835,5.57e-19,22;UBERON:0003894,5.57e-19,22;UBERON:0009854,3.68e-18,23;UBERON:0007499,1.02e-16,25;UBERON:0009497,1.02e-16,25;UBERON:0000015,1.02e-16,25;UBERON:0002423,1.02e-16,25;UBERON:0006235,1.02e-16,25;UBERON:0004161,1.02e-16,25;UBERON:0009856,4.43e-16,26;UBERON:0005172,1.21e-14,54;UBERON:0005173,1.21e-14,54;UBERON:0002365,1.68e-13,31;UBERON:0002330,1.68e-13,31;UBERON:0002417,3.83e-13,60;UBERON:0000916,3.83e-13,60;UBERON:0002368,5.76e-12,35;UBERON:0003929,6.47e-11,54;UBERON:0000949,2.59e-09,45;UBERON:0005177,1.24e-07,101;UBERON:0005911,4.18e-07,82;UBERON:0002530,4.25e-07,59;UBERON:0009569,7.77e-07,112;UBERON:0002114,9.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4914097501126,8.84544495009863,12.9973779469909,0,3.81264159483652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37673205994273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.97924288233859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23103399926713,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81899965643152,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@UPB1 | |||
}} |
Revision as of 14:57, 21 January 2014
Short description: | p3@UPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UPB1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 93bp_to_NM_016327_5end |
EntrezGene: | UPB1 |
HGNC: | 16297 |
UniProt: | B3KNC1Q9UBR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.00e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.95e-22 | 19 |
digestive gland | 5.95e-22 | 19 |
liver bud | 5.95e-22 | 19 |
hepatic diverticulum | 5.57e-19 | 22 |
liver primordium | 5.57e-19 | 22 |
digestive tract diverticulum | 3.68e-18 | 23 |
epithelial sac | 1.02e-16 | 25 |
epithelium of foregut-midgut junction | 1.02e-16 | 25 |
anatomical boundary | 1.02e-16 | 25 |
hepatobiliary system | 1.02e-16 | 25 |
foregut-midgut junction | 1.02e-16 | 25 |
septum transversum | 1.02e-16 | 25 |
sac | 4.43e-16 | 26 |
abdomen element | 1.21e-14 | 54 |
abdominal segment element | 1.21e-14 | 54 |
exocrine gland | 1.68e-13 | 31 |
exocrine system | 1.68e-13 | 31 |
abdominal segment of trunk | 3.83e-13 | 60 |
abdomen | 3.83e-13 | 60 |
endocrine gland | 5.76e-12 | 35 |
gut epithelium | 6.47e-11 | 54 |
endocrine system | 2.59e-09 | 45 |
trunk region element | 1.24e-07 | 101 |
endo-epithelium | 4.18e-07 | 82 |
gland | 4.25e-07 | 59 |
subdivision of trunk | 7.77e-07 | 112 |
duodenum | 9.64e-07 | 2 |