FFCP PHASE1:Hg19::chr4:74486279..74486297,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20796 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000307439_5end | |||
|coexpression_cluster_id=C1523 | |||
|description=CAGE_peak_5_at_RASSF6_5end | |||
|id=chr4:74486279..74486297,- | |||
|ontology_enrichment_celltype=CL:0000066!1.50e-12!254;CL:0002076!2.02e-11!43;CL:0000223!1.79e-09!59;CL:0002251!2.94e-08!21;CL:0000945!7.24e-08!24;CL:0000826!7.24e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.68e-08;42!CL:0000244;5.21e-08;4!CL:0000731;5.21e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.36e-08,42;CL:0000244,5.61e-08,4;CL:0000731,5.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006595;5.89e-07;86 | |||
|ontology_enrichment_disease=DOID:305!1.69e-08!106;DOID:1749!2.93e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.17e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.23e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.73e-17!169;UBERON:0000925!4.73e-17!169;UBERON:0006595!4.73e-17!169;UBERON:0001007!1.31e-12!155;UBERON:0001555!1.31e-12!155;UBERON:0007026!1.31e-12!155;UBERON:0004921!1.08e-10!129;UBERON:0004185!1.08e-10!129;UBERON:0001004!1.10e-10!72;UBERON:0000161!2.75e-08!35;UBERON:0001444!3.33e-08!48;UBERON:0000344!1.71e-07!12;UBERON:0000365!2.84e-07!5;UBERON:0000166!3.55e-07!21;UBERON:0005911!6.28e-07!82;UBERON:0000077!6.93e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.28e-13;33!UBERON:0005409;6.93e-12;22!UBERON:0002108;1.58e-10;4!UBERON:0000160;6.50e-10;17!UBERON:0001555;4.56e-08;54!UBERON:0002370;5.43e-08;2!UBERON:0005058;5.43e-08;2!UBERON:0009113;5.43e-08;2!UBERON:0006562;2.48e-07;2!UBERON:0003127;6.85e-07;2!UBERON:0000161;7.03e-07;19!UBERON:0000166;7.03e-07;19!UBERON:0004177;9.21e-07;5!UBERON:0005057;9.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.87e-20,160;UBERON:0000925,5.87e-20,160;UBERON:0006595,5.87e-20,160;UBERON:0001007,1.00e-13,145;UBERON:0001555,1.00e-13,145;UBERON:0007026,1.00e-13,145;UBERON:0005409,1.35e-12,25;UBERON:0004921,2.33e-12,118;UBERON:0002108,2.90e-10,4;UBERON:0000160,6.29e-10,17;UBERON:0001004,3.09e-09,74;UBERON:0003127,3.81e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.31360943119913,0.944529375764151,0,0,0,0,0,0.369754010166788,14.5638337090967,23.0314156629623,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,1.43402297694502,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.686271241194102,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,3.58234090811393,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80962293576241,1.84161977871793,0,0,0,0,0.539107359730903,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80984356113663,2.69066094311149,1.91419068741876,0.910420027699949,0,0,0,0,0,0,0,0,0,0,1.14378116354295,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.470719003883896,2.15252686335615,3.36942951335251,0.886860307073351,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,2.41544127663434,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.796991953004279,1.65770349318689,1.76352923497993,0,6.40040988397561,0,0,1.79021174675609,0,1.28236427328014,0,0,0,0,0,0,0.0874599999961957,0,1.93448862085349,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0.41827123283581,0.384751292518985,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,1.99052386215701,1.59223616106011,4.27721101453538,0,0,0,0,0,0,16.7858406078413,0,0,0,3.62972148145992,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0.694238953340524,0.489961987071888,0.0870592065804026,0.52418000472609,0,0,0,0,0.193978032976839,0,1.35588444468319,0,0,0,0,0.721429382263803,1.06726497369676,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,1.18112977817699,0,0,0,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0.86686278029118,0.262272940674991,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88195521672762,0,0.854299300541557,2.82967749179399,0,0,10.8686397543869,12.4228450348514,2.55336503108073,0,0,0,0,1.41348686625211,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,1.11903606175556,2.48830904013189,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0,0,0,0,0,0,0,0,1.07962490351128,0.11796972334774,3.11828617486854,0,0,0,0,0.0752103283492573,0,0.781514011233092,0.261906694481422,0,2.06998520703863,0,0,0,0,0,1.09651553371436,0,0,3.32182311862948,0,0,0,0.227662191351298,2.04015451374069,0.115233987555779,0,0,0,0,0,0.863424021355654,0,0,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,1.24329698497822,0.51215543128185,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0.31020638566432,0,0,2.45375584038107,0.121917924982269,0,0,0,0,0.935757853848423,6.76432635548652,0,0.5647304101948,0,8.15199355260037,3.08696632431779,1.09279780251979,3.29222107453066,0,0.235676547101626,0.196308467114945,0,0,0,0,0,3.0981758336728,0.71421575442263,0,0.160482733378337,5.11235471772562,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0.23806443146374,5.10252387704448,5.52464957233135,0,0,0.606351566874658,0.217716747896961,0.342233301085281,1.14498490124799,1.86477734020959,1.66330178273007,0.651226148887796,0,0,0.718601616852695,0,0,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p5@RASSF6 | |||
}} |
Revision as of 01:31, 22 January 2014
Short description: | p5@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | -14bp_to_ENST00000307439_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.36e-08 | 42 |
transitional epithelial cell | 5.61e-08 | 4 |
urothelial cell | 5.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.87e-20 | 160 |
endoderm | 5.87e-20 | 160 |
presumptive endoderm | 5.87e-20 | 160 |
digestive system | 1.00e-13 | 145 |
digestive tract | 1.00e-13 | 145 |
primitive gut | 1.00e-13 | 145 |
gastrointestinal system | 1.35e-12 | 25 |
subdivision of digestive tract | 2.33e-12 | 118 |
small intestine | 2.90e-10 | 4 |
intestine | 6.29e-10 | 17 |
respiratory system | 3.09e-09 | 74 |
open tracheal system trachea | 3.81e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.23e-08 | 10 |