FFCP PHASE1:Hg19::chr4:134070439..134070456,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57575 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13404 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2E7,E9PCA6,Q96SF0,Q9NSR3 | |||
|association_with_transcript=-13bp_to_ENST00000264360,ENST00000394248,NM_020815,NM_032961,uc003igz.2,uc003iha.2_5end | |||
|description=CAGE_peak_1_at_PCDH10_5end | |||
|id=chr4:134070439..134070456,+ | |||
|ontology_enrichment_celltype=CL:0000359!7.11e-13!32;CL:0000222!1.47e-12!119;CL:0000055!1.76e-12!180;CL:0000192!6.90e-12!42;CL:0000514!6.90e-12!42;CL:0000393!9.26e-11!60;CL:0000211!9.26e-11!60;CL:0000680!7.21e-10!57;CL:0000056!7.21e-10!57;CL:0000355!7.21e-10!57;CL:0000187!1.15e-09!54;CL:0000183!2.11e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.99e-13;32!CL:0000192;2.16e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.40e-13,32;CL:0000192,1.40e-12,43;CL:0000514,1.40e-12,43;CL:0000222,1.97e-11,121;CL:0000393,1.66e-10,61;CL:0000211,1.66e-10,61;CL:0000680,1.39e-09,58;CL:0000056,1.39e-09,58;CL:0000355,1.39e-09,58;CL:0000187,2.34e-09,55 | |||
|ontology_enrichment_development_v019=CL:0000514;2.16e-09;43!UBERON:0006601;8.11e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.17e-32!86;UBERON:0000073!3.83e-32!94;UBERON:0001016!3.83e-32!94;UBERON:0001017!6.58e-32!82;UBERON:0000025!7.18e-32!194;UBERON:0002346!1.63e-29!90;UBERON:0003075!4.37e-28!86;UBERON:0007284!4.37e-28!86;UBERON:0000955!1.08e-27!69;UBERON:0006238!1.08e-27!69;UBERON:0004111!2.28e-27!241;UBERON:0001049!9.07e-27!57;UBERON:0005068!9.07e-27!57;UBERON:0006241!9.07e-27!57;UBERON:0007135!9.07e-27!57;UBERON:0002616!3.06e-25!59;UBERON:0000477!8.35e-24!286;UBERON:0000483!5.81e-23!309;UBERON:0000119!2.40e-22!312;UBERON:0002780!3.42e-22!41;UBERON:0001890!3.42e-22!41;UBERON:0006240!3.42e-22!41;UBERON:0000924!7.69e-22!173;UBERON:0006601!7.69e-22!173;UBERON:0003080!1.38e-21!42;UBERON:0001981!5.95e-21!60;UBERON:0007500!5.95e-21!60;UBERON:0004537!5.95e-21!60;UBERON:0006965!5.95e-21!60;UBERON:0003056!1.14e-20!61;UBERON:0004121!1.43e-20!169;UBERON:0002049!1.64e-20!79;UBERON:0007798!1.64e-20!79;UBERON:0004872!1.00e-19!84;UBERON:0000055!2.47e-19!69;UBERON:0001893!2.51e-19!34;UBERON:0002020!3.28e-19!34;UBERON:0003528!3.28e-19!34;UBERON:0002791!1.09e-18!33;UBERON:0001869!3.87e-18!32;UBERON:0000033!4.32e-18!123;UBERON:0001637!8.07e-18!42;UBERON:0003509!8.07e-18!42;UBERON:0004572!8.07e-18!42;UBERON:0000153!1.91e-17!129;UBERON:0007811!1.91e-17!129;UBERON:0000475!1.99e-16!365;UBERON:0007023!6.11e-16!115;UBERON:0004535!4.38e-15!110;UBERON:0002619!2.48e-14!22;UBERON:0001009!3.07e-14!113;UBERON:0000956!9.40e-14!25;UBERON:0000203!9.40e-14!25;UBERON:0004573!1.52e-13!33;UBERON:0004571!1.52e-13!33;UBERON:0001950!3.26e-13!20;UBERON:0003914!3.76e-13!118;UBERON:0000468!7.92e-13!659;UBERON:0000922!2.66e-11!612;UBERON:0000481!4.73e-11!347;UBERON:0002050!5.29e-10!605;UBERON:0005423!5.29e-10!605;UBERON:0000923!9.01e-10!604;UBERON:0005291!9.01e-10!604;UBERON:0006598!9.01e-10!604;UBERON:0002532!9.01e-10!604;UBERON:0001134!8.92e-09!61;UBERON:0002036!8.92e-09!61;UBERON:0003082!8.92e-09!61;UBERON:0002385!9.61e-09!63;UBERON:0001015!9.61e-09!63;UBERON:0000383!9.61e-09!63;UBERON:0000467!1.86e-08!625;UBERON:0000480!2.02e-08!626;UBERON:0000947!2.65e-08!21;UBERON:0010191!2.65e-08!21;UBERON:0000490!3.13e-08!138;UBERON:0004290!1.19e-07!70;UBERON:0000914!4.23e-07!83;UBERON:0002329!4.23e-07!83;UBERON:0003077!4.23e-07!83;UBERON:0003059!4.23e-07!83;UBERON:0007282!4.23e-07!83;UBERON:0009618!4.23e-07!83;UBERON:0007285!4.23e-07!83;UBERON:0002308!5.54e-07!9;UBERON:0000125!5.54e-07!9;UBERON:0002420!6.50e-07!9;UBERON:0007245!6.50e-07!9;UBERON:0010009!6.50e-07!9;UBERON:0010011!6.50e-07!9;UBERON:0000454!6.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.40e-17;34!UBERON:0003528;2.07e-17;34!UBERON:0002020;2.07e-17;34!UBERON:0001869;2.72e-17;32!UBERON:0002791;3.23e-17;32!UBERON:0002780;5.51e-17;41!UBERON:0001890;5.51e-17;41!UBERON:0000073;7.74e-16;53!UBERON:0002616;7.74e-16;53!UBERON:0002619;4.13e-15;22!UBERON:0000956;1.53e-14;25!UBERON:0000203;1.53e-14;25!UBERON:0001637;2.06e-14;42!UBERON:0003509;2.06e-14;42!UBERON:0004572;2.06e-14;42!UBERON:0001017;4.35e-14;75!UBERON:0001950;6.37e-14;20!UBERON:0004573;6.29e-13;33!UBERON:0004571;6.29e-13;33!UBERON:0000955;1.12e-12;68!UBERON:0007500;2.66e-11;56!UBERON:0001981;2.66e-11;56!UBERON:0004537;2.66e-11;56!UBERON:0001016;2.78e-11;83!UBERON:0000055;6.29e-09;65!UBERON:0000947;9.55e-09;21!UBERON:0010191;9.55e-09;21!UBERON:0002049;2.89e-08;75!UBERON:0007798;2.89e-08;75!UBERON:0000125;2.50e-07;9!UBERON:0002308;2.50e-07;9!UBERON:0002420;3.00e-07;9!UBERON:0007245;3.00e-07;9!UBERON:0010009;3.00e-07;9!UBERON:0010011;3.00e-07;9!UBERON:0000454;3.00e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-33,81;UBERON:0001016,5.56e-32,89;UBERON:0000025,6.37e-32,192;UBERON:0002346,1.53e-31,86;UBERON:0003075,4.96e-30,82;UBERON:0007284,4.96e-30,82;UBERON:0000955,5.07e-29,68;UBERON:0006238,5.07e-29,68;UBERON:0001049,6.04e-29,56;UBERON:0005068,6.04e-29,56;UBERON:0006241,6.04e-29,56;UBERON:0007135,6.04e-29,56;UBERON:0004111,4.76e-28,240;UBERON:0000073,2.28e-27,53;UBERON:0002616,2.28e-27,53;UBERON:0010314,1.94e-26,132;UBERON:0002780,1.75e-23,41;UBERON:0001890,1.75e-23,41;UBERON:0003080,1.75e-23,41;UBERON:0006240,1.75e-23,41;UBERON:0004121,2.64e-23,171;UBERON:0000924,2.64e-23,171;UBERON:0006601,2.64e-23,171;UBERON:0003056,8.80e-23,61;UBERON:0000483,3.10e-22,306;UBERON:0010371,9.40e-22,104;UBERON:0000119,2.86e-21,309;UBERON:0007500,4.74e-21,59;UBERON:0001981,4.74e-21,59;UBERON:0004537,4.74e-21,59;UBERON:0006965,4.74e-21,59;UBERON:0001893,1.95e-20,34;UBERON:0002049,1.96e-20,78;UBERON:0007798,1.96e-20,78;UBERON:0003528,2.58e-20,34;UBERON:0002020,2.58e-20,34;UBERON:0004872,1.34e-19,83;UBERON:0001869,3.56e-19,32;UBERON:0002791,4.62e-19,32;UBERON:0001637,7.77e-19,42;UBERON:0003509,7.77e-19,42;UBERON:0004572,7.77e-19,42;UBERON:0000055,8.19e-19,68;UBERON:0007023,3.68e-16,114;UBERON:0004535,1.84e-15,109;UBERON:0002619,3.96e-15,22;UBERON:0000956,1.63e-14,25;UBERON:0000203,1.63e-14,25;UBERON:0001009,1.90e-14,112;UBERON:0004573,2.71e-14,33;UBERON:0004571,2.71e-14,33;UBERON:0001950,6.10e-14,20;UBERON:0003914,2.46e-12,117;UBERON:0000923,7.77e-12,560;UBERON:0010316,7.77e-12,560;UBERON:0005291,7.77e-12,560;UBERON:0006598,7.77e-12,560;UBERON:0010317,7.77e-12,560;UBERON:0002532,7.77e-12,560;UBERON:0002050,1.65e-11,564;UBERON:0000922,2.87e-11,592;UBERON:0005423,1.06e-10,581;UBERON:0011216,2.65e-10,223;UBERON:0000947,1.00e-08,21;UBERON:0010191,1.00e-08,21;UBERON:0001134,4.10e-08,62;UBERON:0002036,4.10e-08,62;UBERON:0003082,4.10e-08,62;UBERON:0002385,4.24e-08,64;UBERON:0001015,4.24e-08,64;UBERON:0000383,4.24e-08,64;UBERON:0000125,2.53e-07,9;UBERON:0002308,2.53e-07,9;UBERON:0002420,3.00e-07,9;UBERON:0007245,3.00e-07,9;UBERON:0010009,3.00e-07,9;UBERON:0010011,3.00e-07,9;UBERON:0000454,3.00e-07,9;UBERON:0007524,3.51e-07,73;UBERON:0000490,3.59e-07,148;UBERON:0003077,4.58e-07,72;UBERON:0007285,4.58e-07,72;UBERON:0003076,8.73e-07,15;UBERON:0003057,8.73e-07,15 | |||
|phase1_expression=11.4457378940451,4.71021152560163,18.7469357447642,25.0183245882826,12.9618717383913,16.574431957907,0,0,0,6.38908234903923,0.697801167972428,0,2.11013582582763,48.3926440073782,10.9361133990212,39.6671836406547,45.2020896017983,40.8973650616929,21.9569759455728,21.0537009311307,5.50801866359483,4.70182082217132,8.01460763966959,6.56997240349844,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,1.81619850790011,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,15.4261197731836,14.959919735693,1.80719576192283,5.51471701699479,2.17269778441236,15.1104329939709,3.89307896242109,20.4195205074387,13.5254932452164,12.1212004256514,44.3364170559757,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0.953962497221368,0,0.371457501329565,88.0517464634504,35.2696183993511,101.712166971025,107.408508965562,189.613745166877,50.3466016750323,83.3889916481874,3.87625138753993,6.04802646567407,29.1206933105263,1.20848795132744,1.52054421143703,0.976248230192678,4.41195696415042,84.254762579703,60.8131149614583,40.1907577000844,50.675166217495,35.2628266171531,80.6875810632909,44.518023775089,0,0,0,114.303548889923,243.763734954316,18.9345128562903,37.001924076597,14.1867352879343,44.8542080113846,91.8041363275463,74.000264525148,9.95875313279252,86.7536728128791,60.6443660550932,4.99479511228274,2.88087962239999,1.17160715916898,0,14.8322673601557,0.298897361103602,0.822041490506354,0,0.421352420106746,19.3946462692149,16.0912955678416,18.1853374869347,0,0,2.73048408581408,0.718618141816238,17.1702836233148,8.13270379167767,6.37247465613621,0,0,0.901428353439581,239.682203017124,10.0458195985763,4.48470516518992,0,0.900273288253207,0.103052529238439,13.912589162464,25.870243030091,3.54430297706659,3.11798416515836,0.504867548488229,0,0.323292113637624,66.0317842080903,44.3309232201617,33.742557869787,0,0,0,9.51394907810844,15.9035721985782,32.0695282319871,20.5248888930433,19.681026368299,8.02950189966826,3.12899064659632,28.302601280487,2.76269842704961,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0,0,2.95262181849859,15.426595118379,58.8550836203902,24.9914809355421,2.53510069643662,0,3.54473944008842,0,0,19.0440269431363,0,0,0,0.277765335475589,1.95484983186195,2.07986957055916,17.3197610430328,85.7884996815568,305.614831095844,2.59859605969933,0,11.6055032863105,0,0,0,0,0,0,0.671928512795438,0,0,0,0,8.86793828212698,0.176096868026452,0.207328115540772,0.288239906833923,0.37872730027914,0.444485260045183,0.763976851116555,0,5.13217338068116,2.05654985406647,0,0,0.897048674762886,0,0.4400297149257,661.095554385275,0,0,104.247741701269,38.4827516572055,0,1.41849132023278,1.0656887160644,14.0118433784985,14.1081617401775,8.23240336780769,0,9.24019066730619,4.75171123760058,15.6748476070985,57.5212082676194,12.0967319330289,0,0,0,106.872685549246,10.3375742250703,2.85273810081437,47.1987059736308,1.2328579353023,5.19276793395697,0,0,0,0,91.2199700958644,59.864332774506,17.785642693887,29.4828626988454,12.7587750330633,0,0,0,68.5845438709992,1.50051156317903,1.62759014219841,15.3898437532797,8.92144943985809,66.5504191443204,1.52283839490527,5.41702979509894,4.5481500811197,7.24311499047534,25.2405727443466,11.799626786669,20.4176493999995,1.56640925970192,1.02943027143257,0.206768026122887,0,0,0.606255142892519,1.66435439510497,0,5.95458738765064,6.90578879796281,2.24528075546459,6.02254001501795,27.632191449602,31.6882224652907,7.42090332224955,0.154209693802656,0,0.246381468041427,3.11552657510173,0,0,0,0,7.46293913069944,7.4657378882754,11.1455752715511,0.902399225814824,0.385076685522074,0,0,1.79437769117889,4.54933536283586,6.80374821106063,7.55705706357488,4.62681758070868,4.33514300070165,3.01013864312912,0.509752546090077,0.831076008928724,2.0148727924996,0,0,2.05160100093111,40.0177867753641,29.9348123091159,7.93415789687461,3.57120912791539,9.65361149070879,0,0,51.4188575501311,3.28680442193215,0.154048617114644,0,0.551346289938122,0.214840489736547,0.290033387828457,0.340906509664404,3.82837753280971,0,0.192190067365106,0,0,3.253918845081,37.1478569260155,27.1844535362634,74.8521599827896,212.922412126809,21.7483248018768,122.869957265899,336.915983390647,2.232950216158,35.750874993216,21.9224723012399,13.3066851481894,3.85145089230528,3.18203247925937,31.3979456079692,6.1156635578327,17.5703699031075,6.71530693370413,221.794182285928,231.425068912592,19.7991474432321,0,57.2726700633518,129.949680510809,2.04749867111979,23.0490854084552,5.65040583101214,81.0507055012802,181.782279216094,110.928073969202,2.31510213706675,2.62357900818653,341.092343674305,59.176288137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| |||
|short_description=p1@PCDH10 | |||
}} |
Revision as of 03:06, 22 January 2014
Short description: | p1@PCDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000264360, ENST00000394248, NM_020815, NM_032961, uc003igz.2, uc003iha.2_5end |
EntrezGene: | PCDH10 |
HGNC: | 13404 |
UniProt: | Q9P2E7E9PCA6Q96SF0Q9NSR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.40e-13 | 32 |
smooth muscle cell | 1.40e-12 | 43 |
smooth muscle myoblast | 1.40e-12 | 43 |
mesodermal cell | 1.97e-11 | 121 |
electrically responsive cell | 1.66e-10 | 61 |
electrically active cell | 1.66e-10 | 61 |
muscle precursor cell | 1.39e-09 | 58 |
myoblast | 1.39e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-09 | 58 |
muscle cell | 2.34e-09 | 55 |