FFCP PHASE1:Hg19::chr4:154073469..154073523,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15974 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000491446_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_TRIM2_5end | |||
|id=chr4:154073469..154073523,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.27e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.85e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.15e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.84e-39!86;UBERON:0001017!7.11e-39!82;UBERON:0001049!3.36e-38!57;UBERON:0005068!3.36e-38!57;UBERON:0006241!3.36e-38!57;UBERON:0007135!3.36e-38!57;UBERON:0000073!6.99e-38!94;UBERON:0001016!6.99e-38!94;UBERON:0000955!9.49e-35!69;UBERON:0006238!9.49e-35!69;UBERON:0002616!4.69e-33!59;UBERON:0002346!5.13e-31!90;UBERON:0003075!1.70e-30!86;UBERON:0007284!1.70e-30!86;UBERON:0002780!2.98e-30!41;UBERON:0001890!2.98e-30!41;UBERON:0006240!2.98e-30!41;UBERON:0003080!4.51e-29!42;UBERON:0003056!6.60e-27!61;UBERON:0007023!2.42e-26!115;UBERON:0001893!1.06e-25!34;UBERON:0002020!1.13e-25!34;UBERON:0003528!1.13e-25!34;UBERON:0002791!6.59e-25!33;UBERON:0001869!2.08e-24!32;UBERON:0000033!2.74e-23!123;UBERON:0000153!3.93e-23!129;UBERON:0007811!3.93e-23!129;UBERON:0000924!2.49e-21!173;UBERON:0006601!2.49e-21!173;UBERON:0004121!1.24e-20!169;UBERON:0000956!6.95e-20!25;UBERON:0000203!6.95e-20!25;UBERON:0002619!1.29e-17!22;UBERON:0001950!2.80e-16!20;UBERON:0000064!3.44e-14!219;UBERON:0000062!7.20e-12!511;UBERON:0003076!4.25e-10!15;UBERON:0003057!4.25e-10!15;UBERON:0000025!4.96e-10!194;UBERON:0000922!1.40e-08!612;UBERON:0002050!5.00e-08!605;UBERON:0005423!5.00e-08!605;UBERON:0004733!6.29e-08!12;UBERON:0002028!6.29e-08!12;UBERON:0007277!6.29e-08!12;UBERON:0000923!9.01e-08!604;UBERON:0005291!9.01e-08!604;UBERON:0006598!9.01e-08!604;UBERON:0002532!9.01e-08!604;UBERON:0001871!1.65e-07!7;UBERON:0004111!2.82e-07!241;UBERON:0002420!2.89e-07!9;UBERON:0007245!2.89e-07!9;UBERON:0010009!2.89e-07!9;UBERON:0010011!2.89e-07!9;UBERON:0000454!2.89e-07!9;UBERON:0002308!3.15e-07!9;UBERON:0000125!3.15e-07!9;UBERON:0000481!3.74e-07!347;UBERON:0004732!5.37e-07!13;UBERON:0000480!5.80e-07!626;UBERON:0000468!6.95e-07!659;UBERON:0000477!8.21e-07!286;UBERON:0000467!8.77e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.81e-36;34!UBERON:0002020;4.81e-36;34!UBERON:0001869;1.88e-35;32!UBERON:0001893;2.51e-35;34!UBERON:0002791;5.25e-35;32!UBERON:0002780;1.29e-34;41!UBERON:0001890;1.29e-34;41!UBERON:0000073;5.55e-33;53!UBERON:0002616;5.55e-33;53!UBERON:0000956;1.46e-32;25!UBERON:0000203;1.46e-32;25!UBERON:0002619;2.17e-28;22!UBERON:0001950;5.57e-26;20!UBERON:0000955;1.89e-24;68!UBERON:0001017;1.44e-23;75!UBERON:0001016;1.59e-21;83!UBERON:0004733;9.09e-12;12!UBERON:0002028;9.09e-12;12!UBERON:0001871;2.98e-11;6!UBERON:0004732;1.15e-10;13!UBERON:0002298;1.45e-10;6!UBERON:0002420;1.00e-09;9!UBERON:0007245;1.00e-09;9!UBERON:0010009;1.00e-09;9!UBERON:0010011;1.00e-09;9!UBERON:0000454;1.00e-09;9!UBERON:0000125;1.15e-09;9!UBERON:0002308;1.15e-09;9!UBERON:0011216;3.09e-09;132!UBERON:0007023;5.95e-09;114!UBERON:0000200;1.19e-08;6!UBERON:0000349;2.75e-08;5!UBERON:0001872;3.30e-08;5!UBERON:0001894;1.21e-07;7!UBERON:0002680;1.55e-07;9!UBERON:0001895;1.55e-07;9!UBERON:0009663;4.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-62,56;UBERON:0005068,1.53e-62,56;UBERON:0006241,1.53e-62,56;UBERON:0007135,1.53e-62,56;UBERON:0001017,2.00e-60,81;UBERON:0001016,9.15e-59,89;UBERON:0000073,2.92e-58,53;UBERON:0002616,2.92e-58,53;UBERON:0000955,1.84e-52,68;UBERON:0006238,1.84e-52,68;UBERON:0002780,2.51e-47,41;UBERON:0001890,2.51e-47,41;UBERON:0003080,2.51e-47,41;UBERON:0006240,2.51e-47,41;UBERON:0003075,2.89e-46,82;UBERON:0007284,2.89e-46,82;UBERON:0002346,4.54e-45,86;UBERON:0001893,4.07e-41,34;UBERON:0003528,4.56e-41,34;UBERON:0002020,4.56e-41,34;UBERON:0001869,9.58e-39,32;UBERON:0002791,2.94e-38,32;UBERON:0003056,1.38e-36,61;UBERON:0010371,4.29e-34,104;UBERON:0000956,1.09e-32,25;UBERON:0000203,1.09e-32,25;UBERON:0004121,5.51e-32,171;UBERON:0000924,5.51e-32,171;UBERON:0006601,5.51e-32,171;UBERON:0002619,1.51e-28,22;UBERON:0011216,1.16e-27,223;UBERON:0007023,1.78e-26,114;UBERON:0001950,4.26e-26,20;UBERON:0010314,1.01e-25,132;UBERON:0003076,1.00e-15,15;UBERON:0003057,1.00e-15,15;UBERON:0000025,1.61e-15,192;UBERON:0004733,7.96e-12,12;UBERON:0002028,7.96e-12,12;UBERON:0007277,7.96e-12,12;UBERON:0001871,2.47e-11,6;UBERON:0004732,1.02e-10,13;UBERON:0002298,1.32e-10,6;UBERON:0004111,2.82e-10,240;UBERON:0002420,7.24e-10,9;UBERON:0007245,7.24e-10,9;UBERON:0010009,7.24e-10,9;UBERON:0010011,7.24e-10,9;UBERON:0000454,7.24e-10,9;UBERON:0000125,8.33e-10,9;UBERON:0002308,8.33e-10,9;UBERON:0000200,9.18e-09,6;UBERON:0000349,2.29e-08,5;UBERON:0001872,2.85e-08,5;UBERON:0000483,6.72e-08,306;UBERON:0000119,1.17e-07,309;UBERON:0001894,1.42e-07,7;UBERON:0006222,1.42e-07,7;UBERON:0002680,1.46e-07,9;UBERON:0001895,1.46e-07,9;UBERON:0010092,1.46e-07,9;UBERON:0009663,3.55e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,1.60057375499824,0,2.5076377718247,3.72106783270374,3.01123735160345,7.53255837568817,0,0.0821005894499457,0,0.786728553697808,0,2.47705797305722,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.868043482863407,0,0,0,0.145398238779565,0.755751887377619,0,0.464858073811369,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,2.6469748805939,1.33037638477538,2.28370442802128,0.851363990735132,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0.695582429850461,0.70445216541493,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0.102827492703324,4.20480280981484,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8277978602268,2.60279707715243,3.09315525111078,6.1981018173709,3.18969375826582,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,2.0794141018192,0.784349769176855,0,2.32213583564327,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.895499018888713,0,0,0,0.984043937099117,0.976135183992909,0.412164046590889,1.46511143709349,1.40266149865,0,0,0,0.580024309752732,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.85803175125719,0.144269212976445,0.497992903438899,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,2.61996756571508,0,0,0,0,8.11731248108146,0.890894042497916,5.83605333988541,6.95903353436409,3.23539657744179,0,0,0,1.79323189425963,0.276283915531148,2.51932747854276,0,0.615424027305347,0,0.629078458031288,0.895105873378046,0,0.197286811273867,0,0,2.90799823828566,5.10224539890182,19.9613798001194,0,0,0,0.568967241427498,1.27126825146383,0.236387681767936,2.06846023944879,0.583209226766509,1.38899995946634,5.31444831488303,2.65312164975897,3.05163472634166,1.43753037910592,0.591095237907095,2.63262476584767,0,0.278847488557207,0.538651809526579,0.569710279235006,0,0,0.108647371922008,1.5950057986596,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,6.36607951820676,0,0,0.995261931078505,0.707660516026713,4.27721101453538,4.15129580152871,3.95404604628809,3.44592433368003,4.51587590970536,0,5.15381780595746,0,0.391329237864179,0,0.789168805698781,6.04953580243319,11.0186194186976,0.126373159256976,0.300646838828985,0.311064574191741,0,0,0,0,0,0.138674673013139,3.29763502836749,0,0,1.57254001417827,0,0,0.0730893170861856,0,0,0,2.25980740780532,0,0,5.25479606433793,0.195551382734803,0,1.06726497369676,0.19980960958213,4.32271251462318,0,0,0.288109595976299,0,0,0.271808412147228,0.627617077873999,0,0,1.80126086612937,0.821432273351958,0,0.429765441419957,0,0,0,0,0.998395002494955,0,0,0.403100834920358,0,0,0,0,0,0,0,3.97614844904652,2.45166131000836,0,0,0,0,0,7.22919724230494,0,2.20655980437755,3.77673034571986,0.211200673038813,0.896436696664224,1.53532157855556,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,3.74920573448497,5.15707146796491,5.30369197441421,0.704815022316672,1.28144895081234,3.30129040709298,0.828478110694391,0.496166021811951,0.395223263795889,0.121792598380896,0,0,0,0,0,5.18278517625773,2.65820453990096,3.17268288745104,2.50381861413,6.88091034828085,7.54317550450596,5.65077266766589,4.42715631795939,0.124980407962107,0.151649117541648,0,0,0,2.02889440055155,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,2.81865670446741,0.345430341731199,0,1.65910123382077,1.55888247071511,1.0629187225069,1.4720885483026,0,0,0.211312123358627,0,0,0,0,0,0,0,10.3594440755958,2.69562028491704,0.314531883711793,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| |||
|short_description=p3@TRIM2 | |||
}} |
Revision as of 03:30, 22 January 2014
Short description: | p3@TRIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000491446_5end |
EntrezGene: | TRIM2 |
HGNC: | 15974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.85e-07 | 25 |