FFCP PHASE1:Hg19::chr5:94620792..94620803,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr5:94620792..94620803,- | |||
|id=chr5:94620792..94620803,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.20e-147;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!6.00e-41!22;UBERON:0001950!2.95e-40!20;UBERON:0000955!5.44e-40!69;UBERON:0006238!5.44e-40!69;UBERON:0001017!1.73e-39!82;UBERON:0001049!1.31e-38!57;UBERON:0005068!1.31e-38!57;UBERON:0006241!1.31e-38!57;UBERON:0007135!1.31e-38!57;UBERON:0005743!2.99e-37!86;UBERON:0002616!4.74e-37!59;UBERON:0000956!1.20e-35!25;UBERON:0000203!1.20e-35!25;UBERON:0001893!1.03e-34!34;UBERON:0002020!1.62e-34!34;UBERON:0003528!1.62e-34!34;UBERON:0001869!8.68e-34!32;UBERON:0000073!6.82e-33!94;UBERON:0001016!6.82e-33!94;UBERON:0002791!3.36e-32!33;UBERON:0002346!3.62e-29!90;UBERON:0003075!8.48e-29!86;UBERON:0007284!8.48e-29!86;UBERON:0002780!5.89e-28!41;UBERON:0001890!5.89e-28!41;UBERON:0006240!5.89e-28!41;UBERON:0003080!3.59e-27!42;UBERON:0000153!6.19e-25!129;UBERON:0007811!6.19e-25!129;UBERON:0000033!2.21e-23!123;UBERON:0007023!4.78e-23!115;UBERON:0003056!6.53e-23!61;UBERON:0000200!2.17e-19!6;UBERON:0001871!9.20e-19!7;UBERON:0000924!3.57e-17!173;UBERON:0006601!3.57e-17!173;UBERON:0004121!1.29e-16!169;UBERON:0004733!6.80e-16!12;UBERON:0002028!6.80e-16!12;UBERON:0007277!6.80e-16!12;UBERON:0004732!1.48e-14!13;UBERON:0002680!1.27e-12!9;UBERON:0001895!1.27e-12!9;UBERON:0010092!1.27e-12!9;UBERON:0003076!2.03e-12!15;UBERON:0003057!2.03e-12!15;UBERON:0002021!1.52e-10!5;UBERON:0002771!2.77e-10!3;UBERON:0000349!3.24e-10!5;UBERON:0000064!4.83e-10!219;UBERON:0000988!7.69e-10!3;UBERON:0002298!2.50e-09!8;UBERON:0000025!3.90e-09!194;UBERON:0000477!1.04e-08!286;UBERON:0001870!7.38e-08!2;UBERON:0000475!2.10e-07!365;UBERON:0001876!2.13e-07!2;UBERON:0004111!4.44e-07!241;UBERON:0002148!9.05e-07!2;UBERON:0009662!9.05e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.92e-74;6!UBERON:0003112;5.12e-50;1!UBERON:0011158;5.12e-50;1!UBERON:0003128;5.12e-50;1!UBERON:0001703;5.12e-50;1!UBERON:0002241;5.12e-50;1!UBERON:0002680;6.09e-50;9!UBERON:0001895;6.09e-50;9!UBERON:0004733;9.17e-38;12!UBERON:0002028;9.17e-38;12!UBERON:0004732;5.97e-35;13!UBERON:0011159;3.42e-11;5!UBERON:0003129;2.26e-08;7!UBERON:0000073;7.84e-07;53!UBERON:0002616;7.84e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.58e-74,6;UBERON:0006215,2.58e-74,6;UBERON:0002680,5.60e-50,9;UBERON:0001895,5.60e-50,9;UBERON:0010092,5.60e-50,9;UBERON:0003112,6.58e-50,1;UBERON:0011158,6.58e-50,1;UBERON:0003128,6.58e-50,1;UBERON:0001703,6.58e-50,1;UBERON:0002241,6.58e-50,1;UBERON:0004761,6.58e-50,1;UBERON:0009617,6.58e-50,1;UBERON:0004733,8.61e-38,12;UBERON:0002028,8.61e-38,12;UBERON:0007277,8.61e-38,12;UBERON:0004732,5.63e-35,13;UBERON:0003076,1.81e-30,15;UBERON:0003057,1.81e-30,15;UBERON:0005253,9.18e-26,2;UBERON:0011159,3.60e-11,5;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0003129,2.35e-08,7;UBERON:0007023,8.86e-08,114;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,4.31259113731776,6.2064999980245,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0.415440338029185,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,0,0.886068179966986,0.122026264901963,0.876336514945499,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0.252071696221718,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0,0.206686796501184,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.611727596791485,0.394636641377094,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0.471353094203252,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:94620792..94620803,- | |||
}} |
Revision as of 06:32, 22 January 2014
Short description: | p@chr5:94620792..94620803, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:94620792..94620803, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.58e-74 | 6 |
rhombic lip | 2.58e-74 | 6 |
regional part of metencephalon | 5.60e-50 | 9 |
metencephalon | 5.60e-50 | 9 |
future metencephalon | 5.60e-50 | 9 |
olfactory region | 6.58e-50 | 1 |
primary subdivision of skull | 6.58e-50 | 1 |
cranium | 6.58e-50 | 1 |
neurocranium | 6.58e-50 | 1 |
chondrocranium | 6.58e-50 | 1 |
cartilaginous neurocranium | 6.58e-50 | 1 |
head paraxial mesoderm | 6.58e-50 | 1 |
segmental subdivision of hindbrain | 8.61e-38 | 12 |
hindbrain | 8.61e-38 | 12 |
presumptive hindbrain | 8.61e-38 | 12 |
segmental subdivision of nervous system | 5.63e-35 | 13 |
posterior neural tube | 1.81e-30 | 15 |
chordal neural plate | 1.81e-30 | 15 |
head mesenchyme | 9.18e-26 | 2 |
primary subdivision of cranial skeletal system | 3.60e-11 | 5 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
skull | 2.35e-08 | 7 |
adult organism | 8.86e-08 | 114 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |
structure with developmental contribution from neural crest | 8.99e-07 | 132 |