FFCP PHASE1:Hg19::chr6:151179016..151179021,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:151179016..151179021,+ | |||
|id=chr6:151179016..151179021,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.54e-11!180;CL:0000057!2.88e-09!75;CL:0002620!2.17e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.90e-12;55!CL:0000048;2.54e-09;58!CL:1000306;6.76e-09;4!CL:0002547;6.76e-09;4!CL:0002195;4.93e-08;2!CL:0002571;4.93e-08;2!CL:0002561;1.57e-07;2!CL:0002334;2.76e-07;12!CL:0000723;3.23e-07;61!CL:0000034;3.56e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,6.19e-09,4;CL:0002547,6.19e-09,4;CL:0000048,1.04e-08,427;CL:0000723,1.94e-08,433;CL:0000057,3.26e-08,76;CL:0000034,4.35e-08,441;CL:0002195,6.43e-08,2;CL:0002571,6.43e-08,2;CL:0002561,8.49e-08,2;CL:0002334,2.18e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.28e-09!14;DOID:120!1.26e-08!27;DOID:193!1.23e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-11;14!DOID:120;4.24e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-11,14;DOID:120,4.66e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.61e-08!42;UBERON:0003509!7.61e-08!42;UBERON:0004572!7.61e-08!42;UBERON:0004872!6.08e-07!84;UBERON:0004573!7.23e-07!33;UBERON:0004571!7.23e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.76e-09;4!UBERON:0000415;6.76e-09;4!UBERON:0007240;6.76e-09;4!UBERON:0005742;6.76e-09;4!UBERON:0005734;6.76e-09;4!UBERON:0004664;6.76e-09;4!UBERON:0004663;6.76e-09;4!UBERON:0000078;1.57e-07;2!UBERON:0005933;1.57e-07;2!UBERON:0002012;1.57e-07;2!UBERON:0005942;1.57e-07;2!UBERON:0008886;1.57e-07;2!UBERON:0005932;1.57e-07;2!UBERON:0002118;5.58e-07;5!UBERON:0000992;9.25e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,6.19e-09,4;UBERON:0007240,6.19e-09,4;UBERON:0005742,6.19e-09,4;UBERON:0005734,6.19e-09,4;UBERON:0004664,6.19e-09,4;UBERON:0004663,6.19e-09,4;UBERON:0005933,8.49e-08,2;UBERON:0005942,8.49e-08,2;UBERON:0005932,8.49e-08,2;UBERON:0001637,1.14e-07,42;UBERON:0003509,1.14e-07,42;UBERON:0004572,1.14e-07,42;UBERON:0000078,2.87e-07,2;UBERON:0007497,2.87e-07,2;UBERON:0003643,2.87e-07,2;UBERON:0003504,2.87e-07,2;UBERON:0003469,2.87e-07,2;UBERON:0003496,2.87e-07,2;UBERON:0002012,2.87e-07,2;UBERON:0008886,2.87e-07,2;UBERON:0007303,2.87e-07,2;UBERON:0002061,2.87e-07,2;UBERON:0005432,2.87e-07,2;UBERON:0004363,2.87e-07,2;UBERON:0004573,5.19e-07,33;UBERON:0004571,5.19e-07,33;UBERON:0002118,6.39e-07,5;UBERON:0000992,9.81e-07,13 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.618831764800233,0.994192127183747,1.34465029290355,2.41077811209591,0,0,0.123121058076788,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.15076305659177,0.722878304769133,1.00267582127178,0,0,1.45990461090791,0,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,9.66587019936497,12.0471380714502,1.41867352879343,0,0,0,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,1.02088964844019,2.33206526395521,0,0.847727604638247,1.50045548042201,0.515262646192195,3.09168648054755,0.18611685633159,0.843881661206331,0.487185025805993,4.03894038790583,0.276149695926898,0.161646056818812,2.4850671476163,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,1.44375896333917,0.118306800039844,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.857839051492628,0,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,1.06375246633948,0,0,0,0,3.28849385413739,0,0,0.325736184293735,1.06617584622764,2.37585561880029,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.49076596687656,0.500170521059677,0,0.207970861530807,0,0.315404830067869,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0.604780586659361,0,1.53461973288062,0.280660094433074,0.384417447767103,0,0,2.96836132889982,0,3.37367278094941,3.03870477251094,0.519254429183621,2.44041794765914,0,0,0,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.307007349452259,0,0,0,0,0.178064071293475,0,0,2.29702882490251,0,0,12.277681526395,0,0,0,0.869932992075073,0.18532421910392,1.14499909393593,0,1.89827654831236,0.38126038784765,0,0,0.636406495851874,0.78494864019923,0,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,1.13008116620243,1.65409603063837,0,0,0,1.9676842561399,0,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.921482106297696,0,0.140669416410513,0,0,0,0.796991953004279,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30726156222788,0.139423744278603,0,0.227884111694002,0,0,0,3.82801391678303,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.391969589657511,0.69647365264322,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0.248505071130865,0.707082103850386,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.209818352539992,0,0,0.191915197319445,0,0,1.017074150619,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.705797459094515,0,0,2.23882204330311,2.10341978862502,8.3220879225392,0.378806010550178,0.754703705257725,2.66943366478961,0.457680136793847,6.35169879805604,0.15543720058278,0.591420599958536,0.63718706865481,0,2.48420731002015,9.53824278033968,0.53168342911599,1.04349012362347,0.751288044986092,2.66563648518157,0,2.18218391043071,0.859284456339908,6.96050639817741,1.19428766609585,0,0.343395705182793,0,1.26184898228651,0.192619830407303,0.428883182749851,0,0,0,0.244736704506468,0,1.54400723580486,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0.318004350653419,0,0,0.352675943690684,0.918736432059601,0.128458450192919,0,0,0,0,0,0,0,0.490738592505128,0,0,1.27078232765372,0.381382095467167,0,0,0.225630985047772,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.85359238546975,0,0,0,0.085213404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| |||
|short_description=p@chr6:151179016..151179021,+ | |||
}} |
Revision as of 14:36, 22 January 2014
Short description: | p@chr6:151179016..151179021, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:151179016..151179021, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 6.19e-09 | 4 |
fibroblast of the aortic adventitia | 6.19e-09 | 4 |
multi fate stem cell | 1.04e-08 | 427 |
somatic stem cell | 1.94e-08 | 433 |
fibroblast | 3.26e-08 | 76 |
stem cell | 4.35e-08 | 441 |
hepatic stem cell | 6.43e-08 | 2 |
hepatic mesenchymal stem cell | 6.43e-08 | 2 |
outer root sheath cell | 8.49e-08 | 2 |
preadipocyte | 2.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
artery wall | 6.19e-09 | 4 |
tunica adventitia of artery | 6.19e-09 | 4 |
adventitia | 6.19e-09 | 4 |
tunica adventitia of blood vessel | 6.19e-09 | 4 |
aorta tunica adventitia | 6.19e-09 | 4 |
aorta wall | 6.19e-09 | 4 |
hair root sheath | 8.49e-08 | 2 |
hair outer root sheath | 8.49e-08 | 2 |
bulb of hair follicle | 8.49e-08 | 2 |
artery | 1.14e-07 | 42 |
arterial blood vessel | 1.14e-07 | 42 |
arterial system | 1.14e-07 | 42 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.87e-07 | 2 |
developing epithelial placode | 2.87e-07 | 2 |
respiratory system arterial blood vessel | 2.87e-07 | 2 |
respiratory system blood vessel | 2.87e-07 | 2 |
respiratory system artery | 2.87e-07 | 2 |
head blood vessel | 2.87e-07 | 2 |
pulmonary artery | 2.87e-07 | 2 |
pulmonary vascular system | 2.87e-07 | 2 |
pharyngeal vasculature | 2.87e-07 | 2 |
truncus arteriosus | 2.87e-07 | 2 |
aortic sac | 2.87e-07 | 2 |
pharyngeal arch artery | 2.87e-07 | 2 |
systemic artery | 5.19e-07 | 33 |
systemic arterial system | 5.19e-07 | 33 |
right ovary | 6.39e-07 | 5 |
female gonad | 9.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-11 | 14 |
female reproductive organ cancer | 4.66e-07 | 27 |